Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0008488 PREDICTED: casparian strip membrane protein VIT_14s0108g01050-like [Solanum tuberosum] Chr6 + View
CSS0013184 hypothetical protein MIMGU_mgv1a020210mg [Erythranthe guttata] Chr2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G930 LG-1 + View
Aethionema arabicum Aa31LG11G14250 LG-11 - View
Acer truncatum Atru.chr8.292 chr8 + View
Acer truncatum Atru.chr11.1757 chr11 - View
Actinidia chinensis Actinidia19885 Lachesis_group10 - View
Arabidopsis lyrata AL6G26160 scaffold_6 + View
Avicennia marina MSTRG.715 ScioBoG_102831_HRSCAF_103044 + View
Avicennia marina MSTRG.23924 ScioBoG_3895_HRSCAF_3912 - View
Amaranthus hybridus Ah.03g134840 CASP-like protein 7 (GmCASP7) AmaHy_arrow1_Scaffold_3 - View
Aquilegia oxysepala Aqoxy3G03444 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.RNL3CY PF04535 - Domain of unknown function (DUF588) (DUF588) arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZBS8DW PF04535 - Domain of unknown function (DUF588) (DUF588) arahy.Tifrunner.gnm1.Arahy.13 + View
Arabidopsis thaliana AT1G14160 Uncharacterized protein family (UPF0497) Uncharacterised protein family (UPF0497)%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497%2C trans-membrane plant (InterPro:IPR006702)%2C Uncharacterised protein family UPF0497%2C trans-membrane plant subgroup (InterPro:IPR006459)%3B BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT5G15290.1)%3B Has 565 Blast hits to 565 proteins in 21 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 565%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT5G15290 Uncharacterized protein family (UPF0497) Uncharacterised protein family (UPF0497)%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497%2C trans-membrane plant (InterPro:IPR006702)%2C Uncharacterised protein family UPF0497%2C trans-membrane plant subgroup (InterPro:IPR006459)%3B BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT1G14160.1)%3B Has 635 Blast hits to 635 proteins in 21 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 635%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0564G135 AmTr_v1.0_scaffold00010 + View
Brassica carinata BcaC07g41597 ChrC07 + View
Brassica carinata BcaB08g34372 ChrB08 - View
Brassica carinata BcaB01g05064 ChrB01 - View
Brassica napus A03p07090 A03 + View
Brassica napus C08p45980 C08 + View
Brassica napus C03p08070 C03 + View
Brassica napus C09p61830 C09 - View
Brassica napus A09p62420 A09 + View
Brassica oleracea BolC3t13305H C3 + View
Brassica oleracea BolC8t52149H C8 + View
Brassica rapa BraA03t10031Z A03 + View
Beta vulgaris EL10Ac6g13240 PF04535 - Domain of unknown function (DUF588) (DUF588) Chr6_EL10_PGA_scaffold0 + View
Cannabis sativa CANSAT64G2285 NC_044379.1 + View
Corylus avellana Haze_14508 Similar to Casparian strip membrane protein 1 (Solanum tuberosum OX%3D4113) 5 - View
Corylus avellana Haze_11989 Similar to VIT_14s0108g01050: Casparian strip membrane protein 3 (Vitis vinifera OX%3D29760) 9 - View
Coffea canephora Cc11_g12770 CASP-like protein 1 chr11 - View
Coffea canephora Cc07_g03550 Casparian strip membrane protein 1 chr7 + View
Citrus clementina Ciclev10033634m.g scaffold_4 + View
Citrus clementina Ciclev10013539m.g scaffold_6 + View
Carpinus fangiana Cfa008961 Cfa03 - View
Carpinus fangiana Cfa007579 Cfa03 + View
Cardamine hirsuta CARHR198020 CASP-like protein 1 Chr6 - View
Carya illinoinensis CiPaw.03G024600 PF04535 - Domain of unknown function (DUF588) (DUF588) Chr03 - View
Carya illinoinensis CiPaw.06G087000 PF04535 - Domain of unknown function (DUF588) (DUF588) Chr06 + View
Citrullus lanatus ClCG09G018100 Casparian strip membrane protein CG_Chr09 - View
Cucumis melo MELO3C012113.2 CASP-like protein chr10 - View
Cucumis melo MELO3C022001.2 CASP-like protein chr09 - View
Carica papaya Cpa.g.sc14.99 supercontig_14 + View
Chenopodium quinoa AUR62005818 CASP-like protein 7 C_Quinoa_Scaffold_1214 + View
Chenopodium quinoa AUR62032812 CASP-like protein 7 C_Quinoa_Scaffold_3751 + View
Capsella rubella Carub.0006s1348 PTHR11615//PTHR11615:SF81 - NITRATE, FROMATE, IRON DEHYDROGENASE // CASPARIAN STRIP MEMBRANE PROTEIN 5 scaffold_6 + View
Cucumis sativus L. CsaV3_5G032920 CASP-like protein chr5 + View
Cucumis sativus L. CsaV3_5G038160 CASP-like protein chr5 + View
Daucus carota DCAR_031002 hypothetical protein DCARv2_Chr9 - View
Daucus carota DCAR_011085 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv16670 GWHABJS00000018 + View
Durio zibethinus Duzib251G0659 NW_019167971.1 - View
Durio zibethinus Duzib248G0567 NW_019168048.1 + View
Erigeron canadensis ECA246G3300 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA233G2215 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.I01956 Chr09 + View
Eucalyptus grandis Eucgr.G02489 Chr07 - View
Erythranthe guttata Migut.H00939 scaffold_8 + View
Erythranthe guttata Migut.L01271 scaffold_12 - View
Erythranthe guttata Migut.K01309 scaffold_11 - View
Eutrema salsugineum Thhalv10008800m.g PTHR11615:SF81 - CASPARIAN STRIP MEMBRANE PROTEIN 5 scaffold_5 + View
Eutrema salsugineum Thhalv10015485m.g PTHR11615:SF81 - CASPARIAN STRIP MEMBRANE PROTEIN 5 scaffold_2 + View
Fragaria x ananassa FAN12G2667 PF04535 - Domain of unknown function (DUF588) (DUF588) Fvb4-3 + View
Fragaria x ananassa FAN22G0341 PF04535 - Domain of unknown function (DUF588) (DUF588) Fvb4-1 - View
Fragaria x ananassa FAN05G4074 PF04535 - Domain of unknown function (DUF588) (DUF588) Fvb6-3 + View
Fragaria x ananassa FAN09G0811 PF04535 - Domain of unknown function (DUF588) (DUF588) Fvb6-2 + View
Fragaria x ananassa FAN07G2691 PF04535 - Domain of unknown function (DUF588) (DUF588) Fvb4-4 + View
Fragaria x ananassa FAN02G3436 PF04535 - Domain of unknown function (DUF588) (DUF588) Fvb6-4 - View
Fragaria x ananassa FAN14G0037 PF04535 - Domain of unknown function (DUF588) (DUF588) Fvb6-1 + View
Fragaria x ananassa FAN17G0117 PF04535 - Domain of unknown function (DUF588) (DUF588) Fvb4-2 + View
Fragaria vesca FvH4_4g31110 PF04535 - Domain of unknown function (DUF588) (DUF588) Fvb4 - View
Fragaria vesca FvH4_6g48140 PF04535 - Domain of unknown function (DUF588) (DUF588) Fvb6 - View
Gossypium hirsutum Gohir.D04G047300 PF04535 - Domain of unknown function (DUF588) (DUF588) D04 - View
Gossypium hirsutum Gohir.A05G368100 PF04535 - Domain of unknown function (DUF588) (DUF588) A05 + View
Glycine max Glyma.01G050700 PTHR11615//PTHR11615:SF81 - NITRATE, FROMATE, IRON DEHYDROGENASE // CASPARIAN STRIP MEMBRANE PROTEIN 5 Gm01 + View
Glycine max Glyma.20G033700 PTHR11615//PTHR11615:SF81 - NITRATE, FROMATE, IRON DEHYDROGENASE // CASPARIAN STRIP MEMBRANE PROTEIN 5 Gm20 - View
Glycine max Glyma.02G109600 PTHR11615//PTHR11615:SF81 - NITRATE, FROMATE, IRON DEHYDROGENASE // CASPARIAN STRIP MEMBRANE PROTEIN 5 Gm02 + View
Gossypium raimondii Gorai.012G052700 Chr12 - View
Gossypium raimondii Gorai.008G180300 Chr08 - View
Helianthus annuus HanXRQChr08g0210771 Putative casparian strip membrane protein HanXRQChr08 - View
Hydrangea macrophylla Hma1.2p1_0357F.1_g134140 Hma1.2p1_0357F.1 + View
Hydrangea macrophylla Hma1.2p1_0409F.1_g146820 Hma1.2p1_0409F.1 - View
Lupinus albus Lalb_Chr17g0340851 PF04535 - Domain of unknown function (DUF588) (DUF588) Lalb_Chr17 + View
Lotus japonicus Lj2g0008772 PF04535 - Domain of unknown function (DUF588) (DUF588) chr2 + View
Lotus japonicus Lj1g0014890 PF04535 - Domain of unknown function (DUF588) (DUF588) chr1 - View
Lonicera japonica Lju41A9T75 GWHAAZE00000094 - View
Lonicera japonica Lj4A111G59 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_8_50921 PTHR11615:SF81 - CASPARIAN STRIP MEMBRANE PROTEIN 5 Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_3_99181 Lsat_1_v8_lg_3 - View
Magnolia biondii MBI02_g23463_MAGBIO AED:0.10 Chr02 + View
Malus domestica MD09G1053500 Uncharacterised protein family (UPF0497) Chr09 + View
Malus domestica MD16G1070000 Uncharacterised protein family (UPF0497) Chr16 - View
Malus domestica MD13G1069600 Uncharacterised protein family (UPF0497) Chr13 - View
Manihot esculenta Manes.02G047700 Chromosome02 + View
Manihot esculenta Manes.05G104300 Chromosome05 + View
Medicago truncatula Medtr7g011090 casparian strip membrane protein chr7 + View
Medicago truncatula Medtr4g081880 casparian strip membrane protein chr4 + View
Medicago truncatula Medtr5g041900 casparian strip membrane protein chr5 + View
Nelumbo nucifera Nn3g17294 chr3 + View
Nicotiana tabacum Nitab4.5_0000212g0070 Uncharacterised protein family UPF0497, trans-membrane plant subgroup, Uncharacterised protein family UPF0497, trans-membrane plant Nitab4.5_0000212 - View
Olea europaea Oeu062103.1 chr10 - View
Oryza sativa ssp. japonica Os02g0743900 Similar to plant integral membrane protein TIGR01569 containing protein. chr02 - View
Petunia axillaris Peaxi162Scf00129g00021 Unknown protein Peaxi162Scf00129 - View
Punica granatum PGR083G1016 NC_045133.1 - View
Punica granatum PGR004G1727 NC_045131.1 - View
Punica granatum PGR119G1798 NC_045132.1 - View
Prunus persica Prupe.3G264900 PTHR11615:SF81 - CASPARIAN STRIP MEMBRANE PROTEIN 5 Pp03 - View
Prunus persica Prupe.1G277100 PTHR11615:SF81 - CASPARIAN STRIP MEMBRANE PROTEIN 5 Pp01 + View
Populus trichocarpa Potri.008G088700 PF04535 - Domain of unknown function (DUF588) (DUF588) Chr08 + View
Populus trichocarpa Potri.017G088100 PTHR11615//PTHR11615:SF138 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Chr17 - View
Quercus lobata QL02p084608 CM012294 + View
Quercus lobata QL03p068204 3 - View
Rosa chinensis RcHm_v2.0_Chr4g0439491 RcHm_v2.0_Chr4 - View
Rosa chinensis RcHm_v2.0_Chr2g0167481 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim12G0064900 chr12 + View
Striga asiatica SGA_v2.0_scaffold413G51182 scaffold413 - View
Salvia bowleyana SalBow1G8384 GWHASIU00000001 + View
Salvia bowleyana SalBow2G0794 GWHASIU00000007 - View
Salix brachista Sabra17G0077900 GWHAAZH00000017 - View
Simmondsia chinensis Sc11g0002080 GWHAASQ00000011 + View
Sechium edule Sed0004668 LG07 + View
Solanum lycopersicum Solyc02g088160.4 Casparian strip membrane protein 1 (AHRD V3.3 *-* CASP1_SOLTU) SL4.0ch02 + View
Solanum lycopersicum Solyc02g067190.4 Casparian strip membrane protein 1 (AHRD V3.3 *** CASP1_SOLTU) SL4.0ch02 + View
Solanum lycopersicum Solyc05g007790.3 Casparian strip membrane protein 1 (AHRD V3.3 *** CASP1_SOLDE) SL4.0ch05 - View
Schrenkiella parvula Sp6g28780 PF04535 - Domain of unknown function (DUF588) (DUF588) ch6-6 - View
Schrenkiella parvula Sp1g12500 PF04535 - Domain of unknown function (DUF588) (DUF588) ch1-1 - View
Solanum pennellii Sopen05g003650 Uncharacterised protein family (UPF0497) | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant , Uncharacterised protein family UPF0497, trans-membrane plant subgroup | BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) Spenn-ch05 - View
Solanum pennellii Sopen02g032850 Uncharacterised protein family (UPF0497) | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant , Uncharacterised protein family UPF0497, trans-membrane plant subgroup | BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) Spenn-ch02 + View
Solanum pennellii Sopen02g016370 Uncharacterised protein family (UPF0497) | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant , Uncharacterised protein family UPF0497, trans-membrane plant subgroup | BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400001337 UPF0497 membrane protein 3 ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400025146 UPF0497 membrane protein 3 ST4.03ch02 + View
Trochodendron aralioides TAR629G1983 group0 - View
Theobroma cacao Thecc.04G085900 Casparian strip membrane protein 5 Chromosome_4 + View
Theobroma cacao Thecc.02G343100 Casparian strip membrane protein 5 Chromosome_2 - View
Tarenaya hassleriana THA.LOC104821022 casparian strip membrane protein 5-like NW_010966372.1 - View
Trifolium pratense TPR.G34034 Tp57577_TGAC_v2_LG2 - View
Trifolium pratense TPR.G33601 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI79G0536 NC_052238.1 - View
Tripterygium wilfordii TWI60G1169 NC_052246.1 + View
Vigna mungo VMungo1215G2536 CM024074.1 + View
Vitis vinifera GSVIVG01011443001 chr14 + View