Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0045968 Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis] Chr5 - View
CSS0047145 DAZ-associated protein 1 [Glycine soja] Chr7 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G11490 LG-3 - View
Aethionema arabicum Aa31LG5G12290 LG-5 - View
Acer truncatum Atru.chr6.3348 chr6 - View
Acer truncatum Atru.chr2.3620 chr2 + View
Actinidia chinensis Actinidia39075 Lachesis_group9 - View
Actinidia chinensis Actinidia35384 Lachesis_group2 - View
Arabidopsis lyrata AL7G26230 scaffold_7 - View
Arabidopsis lyrata AL8G31100 scaffold_8 - View
Avicennia marina MSTRG.6978 ScioBoG_102840_HRSCAF_103099 - View
Avicennia marina MSTRG.13011 ScioBoG_17730_HRSCAF_17811 + View
Avicennia marina MSTRG.14474 ScioBoG_18782_HRSCAF_18867 + View
Aquilegia oxysepala Aqoxy1G04018 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.63XCF8 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.230XUM PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.E06EVW PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.146QCX PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Y057K4 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.17 + View
Arabidopsis thaliana AT5G55550 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G26650.2)%3B Has 29827 Blast hits to 19374 proteins in 849 species: Archae - 8%3B Bacteria - 2743%3B Metazoa - 14322%3B Fungi - 3285%3B Plants - 6229%3B Viruses - 3%3B Other Eukaryotes - 3237 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT4G26650 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G55550.4)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaC06g32734 ChrC06 - View
Brassica carinata BcaC09g52250 ChrC09 + View
Brassica carinata BcaC01g06374 ChrC01 - View
Brassica napus A03p56830 A03 + View
Brassica napus A01p17910 A01 + View
Brassica napus C03p16430 C03 + View
Brassica napus C07p55240 C07 - View
Brassica napus C01p22710 C01 + View
Brassica napus A03p13990 A03 + View
Brassica oleracea BolC1t02200H C1 + View
Brassica rapa BraA01t01745Z A01 + View
Brassica rapa BraA03t10698Z A03 + View
Beta vulgaris EL10Ac8g20224 K14411 - RNA-binding protein Musashi (MSI) Chr8_EL10_PGA_scaffold4 - View
Beta vulgaris EL10Ac4g07622 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Chr4_EL10_PGA_scaffold1 + View
Cannabis sativa CANSAT11G1500 NC_044377.1 + View
Cannabis sativa CANSAT56G0210 NC_044371.1 + View
Cicer arietinum L. Ca_00739_v3 Ca_LG1_v3 - View
Cicer arietinum L. Ca_20149_v3 Ca_LG6_v3 - View
Corylus avellana Haze_12700 Similar to RNP1: Heterogeneous nuclear ribonucleoprotein 1 (Arabidopsis thaliana OX%3D3702) 5 + View
Corylus avellana Haze_06962 Similar to RNP1: Heterogeneous nuclear ribonucleoprotein 1 (Arabidopsis thaliana OX%3D3702) 2 - View
Corylus avellana Haze_09780 Similar to RNP1: Heterogeneous nuclear ribonucleoprotein 1 (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc05_g14610 RNA-binding (RRM/RBD/RNP motifs) family protein chr5 - View
Citrus clementina Ciclev10008158m.g scaffold_1 - View
Citrus clementina Ciclev10015084m.g scaffold_2 - View
Ceratophyllum demersum CDE04G1694 2 + View
Cardamine hirsuta CARHR234250 RNA-binding protein-like Chr7 + View
Carya illinoinensis CiPaw.10G079300 PTHR24012//PTHR24012:SF433 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Chr10 - View
Carya illinoinensis CiPaw.11G200300 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Chr11 - View
Carya illinoinensis CiPaw.04G195500 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Chr04 - View
Carya illinoinensis CiPaw.09G104300 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Chr09 - View
Carya illinoinensis CiPaw.03G278300 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Chr03 - View
Carya illinoinensis CiPaw.12G135500 PTHR24012//PTHR24012:SF433 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Chr12 - View
Citrullus lanatus ClCG10G004630 RNA-binding protein, putative CG_Chr10 + View
Citrullus lanatus ClCG02G009430 RNA-binding protein, putative CG_Chr02 + View
Cucumis melo MELO3C014139.2 heterogeneous nuclear ribonucleoprotein 1 chr06 + View
Corchorus olitorius COL.COLO4_09778 hypothetical protein AWUE01014269.1 - View
Chenopodium quinoa AUR62017528 RNP1: Heterogeneous nuclear ribonucleoprotein 1 C_Quinoa_Scaffold_3458 + View
Chenopodium quinoa AUR62017053 RNP1: Heterogeneous nuclear ribonucleoprotein 1 C_Quinoa_Scaffold_3787 - View
Chenopodium quinoa AUR62021836 RNP1: Heterogeneous nuclear ribonucleoprotein 1 C_Quinoa_Scaffold_1862 + View
Chenopodium quinoa AUR62015072 RNP1: Heterogeneous nuclear ribonucleoprotein 1 C_Quinoa_Scaffold_2888 + View
Chenopodium quinoa AUR62015942 RNP1: Heterogeneous nuclear ribonucleoprotein 1 C_Quinoa_Scaffold_1529 - View
Chenopodium quinoa AUR62040665 RNP1: Heterogeneous nuclear ribonucleoprotein 1 C_Quinoa_Scaffold_3686 + View
Capsella rubella Carub.0007s1422 scaffold_7 - View
Capsella rubella Carub.0008s1591 scaffold_8 - View
Cucumis sativus L. CsaV3_3G004430 heterogeneous nuclear ribonucleoprotein 1 chr3 + View
Daucus carota DCAR_013210 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv10305 GWHABJS00000001 - View
Davidia involucrata Dinv07853 GWHABJS00000013 + View
Davidia involucrata Dinv05842 GWHABJS00000001 - View
Davidia involucrata Dinv40830 GWHABJS00000013 + View
Durio zibethinus Duzib268G1297 NW_019168270.1 + View
Durio zibethinus Duzib211G0262 NW_019168049.1 + View
Durio zibethinus Duzib213G0317 NW_019167993.1 + View
Durio zibethinus Duzib138G0166 NW_019167893.1 + View
Erigeron canadensis ECA246G0979 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA236G0194 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.K00657 Chr11 + View
Eucalyptus grandis Eucgr.F00624 Chr06 + View
Erythranthe guttata Migut.M01682 scaffold_13 + View
Eutrema salsugineum Thhalv10025172m.g PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN scaffold_1 - View
Eutrema salsugineum Thhalv10013607m.g PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN scaffold_2 + View
Fragaria x ananassa FAN25G1812 PTHR24012//PTHR24012:SF433 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Fvb3-1 - View
Fragaria x ananassa FAN21G2919 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Fvb3-2 - View
Fragaria x ananassa FAN11G0151 PTHR24012//PTHR24012:SF433 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Fvb3-4 + View
Fragaria x ananassa FAN16G1293 PTHR24012//PTHR24012:SF433 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Fvb3-3 - View
Fragaria x ananassa FAN25G2325 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Fvb3-1 - View
Fragaria x ananassa FAN09G3717 PTHR24012//PTHR24012:SF433 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Fvb6-2 - View
Fragaria x ananassa FAN14G1237 PTHR24012//PTHR24012:SF433 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Fvb6-1 - View
Fragaria x ananassa FAN05G4421 PTHR24012//PTHR24012:SF433 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Fvb6-3 - View
Fragaria vesca FvH4_6g41280 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Fvb6 + View
Fragaria vesca FvH4_3g23960 PTHR24012//PTHR24012:SF433 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Fvb3 - View
Gossypium hirsutum Gohir.D11G157000 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN D11 + View
Gossypium hirsutum Gohir.A04G009800 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN A04 + View
Gossypium hirsutum Gohir.A11G150500 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN A11 + View
Gossypium hirsutum Gohir.D05G378200 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN D05 - View
Gossypium hirsutum Gohir.D07G196300 KOG4205 - RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 D07 + View
Gossypium hirsutum Gohir.A01G086700 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN A01 - View
Gossypium hirsutum Gohir.D01G072900 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN D01 - View
Glycine max Glyma.08G325500 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Gm08 - View
Glycine max Glyma.02G297000 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Gm02 - View
Glycine max Glyma.14G016600 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Gm14 + View
Glycine max Glyma.18G081700 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Gm18 + View
Gossypium raimondii Gorai.001G219900 Chr01 + View
Gossypium raimondii Gorai.002G095900 Chr02 - View
Gossypium raimondii Gorai.009G446000 Chr09 - View
Gossypium raimondii Gorai.007G167500 Chr07 + View
Hydrangea macrophylla Hma1.2p1_0036F.1_g022790 Hma1.2p1_0036F.1 + View
Lupinus albus Lalb_Chr00c48g0412761 PTHR24012//PTHR24012:SF433 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Lalb_Chr00c48 + View
Lupinus albus Lalb_Chr20g0116271 K14411 - RNA-binding protein Musashi (MSI) Lalb_Chr20 - View
Lupinus albus Lalb_Chr04g0248031 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Lalb_Chr04 + View
Lupinus albus Lalb_Chr18g0050371 PTHR24012//PTHR24012:SF433 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN Lalb_Chr18 - View
Lupinus albus Lalb_Chr10g0107291 K14411 - RNA-binding protein Musashi (MSI) Lalb_Chr10 - View
Lotus japonicus LjContig00272g0013152 K14411 - RNA-binding protein Musashi (MSI) Contig00272 - View
Lotus japonicus Lj6g0019407 K14411 - RNA-binding protein Musashi (MSI) chr6 + View
Lonicera japonica Lj8A175T78 GWHAAZE00000008 - View
Lonicera japonica Lj1C884G19 GWHAAZE00000001 - View
Lonicera japonica Lj8P133T52 GWHAAZE00000008 - View
Lonicera japonica Lj1C791G9 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_9_104860 Lsat_1_v8_lg_9 + View
Magnolia biondii MBI19_g37314_MAGBIO AED:0.08 Chr19 + View
Malus domestica MD03G1189400 RNA-binding (RRM/RBD/RNP motifs) family protein Chr03 + View
Malus domestica MD17G1111500 RNA-binding (RRM/RBD/RNP motifs) family protein Chr17 - View
Malus domestica MD09G1120600 RNA-binding (RRM/RBD/RNP motifs) family protein Chr09 - View
Malus domestica MD11G1205500 RNA-binding (RRM/RBD/RNP motifs) family protein Chr11 + View
Manihot esculenta Manes.15G063900 Chromosome15 + View
Manihot esculenta Manes.03G137402 Chromosome03 - View
Medicago truncatula Medtr3g055990 heterogeneous nuclear ribonucleoprotein 27C, putative chr3 - View
Nelumbo nucifera Nn1g03260 chr1 + View
Nelumbo nucifera Nn1g07431 chr1 - View
Nicotiana tabacum Nitab4.5_0003869g0010 RNA recognition motif domain, Nucleotide-binding, alpha-beta plait Nitab4.5_0003869 + View
Olea europaea Oeu005974.3 scaffold1216 + View
Olea europaea Oeu005499.2 chr10 - View
Olea europaea Oeu057082.1 chr18 + View
Olea europaea Oeu019615.1 chr6 - View
Olea europaea Oeu034551.2 scaffold2910 - View
Olea europaea Oeu054324.1 chr19 - View
Punica granatum PGR083G1557 NC_045133.1 - View
Prunus persica Prupe.3G202600 Pp03 + View
Prunus persica Prupe.4G231900 Pp04 - View
Pisum sativum Psat5g171560 RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) chr5LG3 + View
Pisum sativum Psat2g004080 RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) chr2LG1 - View
Papaver somniferum PSO675G8527 NC_039358.1 + View
Papaver somniferum PSO302G0304 NW_020624820.1 + View
Populus trichocarpa Potri.011G088100 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Chr11 + View
Populus trichocarpa Potri.014G161600 K14411 - RNA-binding protein Musashi (MSI) Chr14 + View
Populus trichocarpa Potri.001G361300 PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Chr01 - View
Populus trichocarpa Potri.002G222400 K14411 - RNA-binding protein Musashi (MSI) Chr02 + View
Phaseolus vulgaris Phvul.006G053000 Chr06 - View
Phaseolus vulgaris Phvul.008G274900 Chr08 - View
Quercus lobata QL08p005943 8 - View
Quercus lobata QL08p028840 8 + View
Rosa chinensis RcHm_v2.0_Chr5g0042461 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim06G0173600 chr06 - View
Striga asiatica SGA_v2.0_scaffold171G38892 scaffold171 + View
Striga asiatica SGA_v2.0_scaffold168G38528 scaffold168 - View
Striga asiatica SGA_v2.0_scaffold8G04391 scaffold8 + View
Salvia bowleyana SalBow8G0972 GWHASIU00000004 - View
Salix brachista Sabra16G0238300 GWHAAZH00000016 - View
Simmondsia chinensis Sc07g0002990 GWHAASQ00000007 - View
Simmondsia chinensis Sc03g0008030 GWHAASQ00000003 + View
Sechium edule Sed0014560 LG08 + View
Sechium edule Sed0026451 LG03 + View
Solanum lycopersicum Solyc10g006050.3 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** F4JFN7_ARATH) SL4.0ch10 + View
Solanum lycopersicum Solyc12g014600.2 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** F4JFN7_ARATH) SL4.0ch12 - View
Schrenkiella parvula Sp6g17440 PTHR24012//PTHR24012:SF433 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN ch6-6 - View
Schrenkiella parvula Sp7g24620 PTHR24012//PTHR24012:SF433 - FAMILY NOT NAMED // RNA RECOGNITION MOTIF-CONTAINING PROTEIN ch7-4 + View
Solanum pennellii Sopen12g007490 RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein Spenn-ch12 - View
Solanum pennellii Sopen11g007210 RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein Spenn-ch11 - View
Solanum pennellii Sopen07g024450 RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG400029803 Heterogeneous nuclear ribonucleoprotein 27C ST4.03ch12 - View
Solanum tuberosum PGSC0003DMG400014380 Heterogeneous nuclear ribonucleoprotein 27C ST4.03ch10 + View
Selenicereus undatus Hund23136 Scaffold_33680 + View
Trochodendron aralioides TAR627G0238 group6 - View
Trochodendron aralioides TAR624G1025 group9 - View
Trochodendron aralioides TAR629G0290 group0 + View
Trochodendron aralioides TAR626G1034 group3 + View
Theobroma cacao Thecc.07G023300 RNA-binding family protein Chromosome_7 + View
Theobroma cacao Thecc.06G235700 RNA-binding family protein Chromosome_6 - View
Theobroma cacao Thecc.01G189300 HnRNP Chromosome_1 - View
Trifolium pratense TPR.G1948 Tp57577_TGAC_v2_LG1 - View
Tripterygium wilfordii TWI38G0861 NC_052252.1 - View
Tripterygium wilfordii TWI75G1370 NC_052253.1 + View
Tripterygium wilfordii TWI36G0488 NC_052237.1 + View
Tripterygium wilfordii TWI39G0702 NC_052250.1 + View
Vaccinium macrocarpon vmacro09392 Similar to RNP1: Heterogeneous nuclear ribonucleoprotein 1 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro12110 Similar to RNP1: Heterogeneous nuclear ribonucleoprotein 1 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0540G0939 CM024075.1 + View
Vigna mungo VMungo0647G0334 CM024073.1 - View
Vitis vinifera GSVIVG01037771001 chr19 - View