Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr1.1405 chr1 - View
Actinidia chinensis Actinidia17961 Lachesis_group18 + View
Actinidia chinensis Actinidia37877 Lachesis_group5 + View
Avicennia marina MSTRG.19790 ScioBoG_25048_HRSCAF_25167 + View
Avicennia marina MSTRG.6348 ScioBoG_102839_HRSCAF_103093 + View
Amaranthus hybridus Ah.13g077200 Auxin efflux carrier component 1a (OsPIN1a) (Auxin efflux carrier component 1) (OsPIN1) (Ethylene-insensitive root 1 homolog) (OsPIN1b) AmaHy_arrow1_Scaffold_13 - View
Amaranthus hybridus Ah.04g150890 Probable auxin efflux carrier component 1c (OsPIN1c) (OsPIN1a) AmaHy_arrow1_Scaffold_4 - View
Aquilegia oxysepala Aqoxy1G00413 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.66N4V9 K13947 - auxin efflux carrier family (PIN) arahy.Tifrunner.gnm1.Arahy.10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.E6QCJN K13947 - auxin efflux carrier family (PIN) arahy.Tifrunner.gnm1.Arahy.20 - View
Beta vulgaris EL10Ac3g07252 PTHR31752//PTHR31752:SF20 - FAMILY NOT NAMED // AUXIN EFFLUX CARRIER COMPONENT 1 Chr3_EL10_PGA_scaffold7 + View
Capsicum annuum CAN.G960.66 PGAv.1.6.scaffold960 - View
Cannabis sativa CANSAT64G1523 NC_044379.1 - View
Cicer arietinum L. Ca_08377_v3 Ca_LG3_v3 + View
Corylus avellana Haze_20244 Similar to PIN1: Auxin efflux carrier component 1 (Arabidopsis thaliana OX%3D3702) 10 - View
Coffea canephora Cc06_g19880 Probable auxin efflux carrier component 1c chr6 - View
Citrus clementina Ciclev10012938m.g scaffold_6 + View
Carpinus fangiana Cfa019991 Cfa08 + View
Carya illinoinensis CiPaw.09G049200 K13947 - auxin efflux carrier family (PIN) Chr09 - View
Carya illinoinensis CiPaw.10G041300 K13947 - auxin efflux carrier family (PIN) Chr10 - View
Citrullus lanatus ClCG04G005690 Auxin Efflux Carrier CG_Chr04 - View
Carica papaya Cpa.g.sc92.84 supercontig_92 - View
Chenopodium quinoa AUR62030300 PIN1C: Probable auxin efflux carrier component 1c C_Quinoa_Scaffold_3970 + View
Chenopodium quinoa AUR62018361 PIN1C: Probable auxin efflux carrier component 1c C_Quinoa_Scaffold_4077 + View
Cucumis sativus L. CsaV3_4G029470 Auxin efflux carrier component chr4 + View
Davidia involucrata Dinv05638 GWHABJS00000015 - View
Davidia involucrata Dinv21471 GWHABJS00000021 + View
Erigeron canadensis ECA248G3444 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.A02229 Chr01 + View
Erythranthe guttata Migut.J01639 scaffold_10 + View
Gossypium hirsutum Gohir.A11G306600 K13947 - auxin efflux carrier family (PIN) A11 + View
Glycine max Glyma.03G126000 PTHR31752:SF20 - AUXIN EFFLUX CARRIER COMPONENT 1 Gm03 + View
Glycine max Glyma.19G128800 PTHR31752:SF20 - AUXIN EFFLUX CARRIER COMPONENT 1 Gm19 + View
Lupinus albus Lalb_Chr14g0365691 K13947 - auxin efflux carrier family (PIN) Lalb_Chr14 + View
Lotus japonicus Lj1g0017782 K13947 - auxin efflux carrier family (PIN) chr1 - View
Lonicera japonica Lj1A1088T17 GWHAAZE00000001 + View
Magnolia biondii MBI19_g33683_MAGBIO AED:0.09 Chr19 - View
Malus domestica MD12G1095100 Auxin efflux carrier family protein Chr12 + View
Manihot esculenta Manes.08G060200 Chromosome08 - View
Medicago truncatula Medtr7g089360 auxin efflux carrier family transporter chr7 + View
Olea europaea Oeu005207.1 scaffold119 + View
Oryza sativa ssp. japonica Os12g0133800 PIN protein, Auxin efflux carrier, Auxin transport and signaling, Panicle formation chr12 - View
Petunia axillaris Peaxi162Scf00003g04923 Auxin efflux carrier family protein Peaxi162Scf00003 - View
Punica granatum PGR042G0523 NC_045130.1 - View
Pisum sativum Psat3g080160 Membrane transport protein chr3LG5 - View
Populus trichocarpa Potri.016G035300 K13947 - auxin efflux carrier family (PIN) Chr16 + View
Populus trichocarpa Potri.006G037000 K13947 - auxin efflux carrier family (PIN) Chr06 + View
Phaseolus vulgaris Phvul.001G121100 PTHR31752:SF20 - AUXIN EFFLUX CARRIER COMPONENT 1 Chr01 + View
Quercus lobata QL07p011518 7 - View
Striga asiatica SGA_v2.0_scaffold66G22268 scaffold66 - View
Salvia bowleyana SalBow6G5614 GWHASIU00000002 + View
Salix brachista Sabra06G0025100 GWHAAZH00000006 + View
Salix brachista Sabra16G0037600 GWHAAZH00000016 + View
Simmondsia chinensis Sc13g0001030 GWHAASQ00000013 + View
Solanum lycopersicum Solyc10g078370.2 Auxin Efflux Facilitator 9 SL4.0ch10 + View
Solanum pennellii Sopen10g029030 Auxin efflux carrier, Probable auxin efflux carrier component 1c (OsPIN1c) - Oryza sativa (Rice), Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins. | PIN-FORMED 1 (PIN1) | FUNCTIONS IN: transporter activity | INVOLVED IN: in 14 processes | LOCATED IN: apical part of cell, plasma membrane, membrane, basal plasma membrane, cytoplasm | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Auxin efflux carrier, subgroup , Auxin efflux carrier | BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein Spenn-ch10 + View
Solanum tuberosum PGSC0003DMG400008379 Auxin efflux carrier ST4.03ch10 - View
Trochodendron aralioides TAR623G0931 group7 - View
Theobroma cacao Thecc.05G125300 Auxin efflux carrier family protein Chromosome_5 + View
Tripterygium wilfordii TWI53G2024 NC_052244.1 + View
Tripterygium wilfordii TWI74G0272 NC_052234.1 - View
Vaccinium macrocarpon vmacro07777 Similar to PIN1C: Probable auxin efflux carrier component 1c (Oryza sativa subsp. japonica OX%3D39947) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G0850 CM024070.1 + View