Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0017258 LIGULELESS1 protein, putative [Theobroma cacao] Chr15 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G11840 LG-4 + View
Acer truncatum Atru.chr9.490 chr9 + View
Acer truncatum Atru.chr11.1593 chr11 + View
Actinidia chinensis Actinidia35050 Lachesis_group2 - View
Actinidia chinensis Actinidia31933 Lachesis_group15 - View
Actinidia chinensis Actinidia18975 Lachesis_group9 - View
Avicennia marina MSTRG.13456 ScioBoG_18778_HRSCAF_18863 - View
Amaranthus hybridus Ah.03g138740 AmaHy_arrow1_Scaffold_3 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EG887M PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED arahy.Tifrunner.gnm1.Arahy.20 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AV6HSI PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EUS1NI PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED arahy.Tifrunner.gnm1.Arahy.10 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Y93M2M PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED arahy.Tifrunner.gnm1.Arahy.11 - View
Arabidopsis thaliana AT1G69170 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein Encodes SPL6. Required for the resistance mediated by the TIR-NB-LRR RPS4 against Pseudomonas syringae carrying the avrRps4 effector. Transcriptome analysis indicates that SPL6 positively regulates a subset of defense genes. Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C SBP-box (InterPro:IPR004333)%3B BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 14 (TAIR:AT1G20980.1)%3B Has 836 Blast hits to 835 proteins in 40 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 0%3B Plants - 834%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB03g15877 ChrB03 + View
Brassica napus A02p15650 A02 + View
Brassica napus A07p35520 A07 + View
Brassica rapa BraA02t06626Z A02 + View
Beta vulgaris EL10Ac5g11173 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Chr5_EL10_PGA_scaffold2 - View
Capsicum annuum CAN.G707.26 PGAv.1.6.scaffold707 - View
Corylus avellana Haze_07755 Similar to SPL6: Squamosa promoter-binding-like protein 6 (Arabidopsis thaliana OX%3D3702) 4 - View
Corylus avellana Haze_11877 Similar to SPL6: Squamosa promoter-binding-like protein 6 (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc11_g11740 Putative uncharacterized protein chr11 + View
Citrus clementina Ciclev10031270m.g scaffold_4 + View
Citrus clementina Ciclev10019546m.g scaffold_3 - View
Ceratophyllum demersum CDE06G2310 4 + View
Ceratophyllum demersum CDE04G0820 2 + View
Carpinus fangiana Cfa019362 Cfa08 - View
Cardamine hirsuta CARHR062040 Squamosa promoter-binding-like protein 6 Chr2 + View
Carya illinoinensis CiPaw.12G010000 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Chr12 + View
Carya illinoinensis CiPaw.11G056200 PTHR31251:SF22 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Chr11 - View
Carya illinoinensis CiPaw.05G123200 PF03110 - SBP domain (SBP) Chr05 + View
Citrullus lanatus ClCG06G015490 Squamosa promoter-binding protein-like 6 CG_Chr06 + View
Citrullus lanatus ClCG04G011620 Squamosa promoter-binding protein-like 6 CG_Chr04 + View
Cucumis melo MELO3C017245.2 squamosa promoter-binding-like protein 6 chr02 + View
Cucumis melo MELO3C002048.2 squamosa promoter-binding-like protein 12 isoform X1 chr12 + View
Chenopodium quinoa AUR62039662 SPL6: Squamosa promoter-binding-like protein 6 C_Quinoa_Scaffold_1452 - View
Chenopodium quinoa AUR62003075 SPL6: Squamosa promoter-binding-like protein 6 C_Quinoa_Scaffold_1000 + View
Chenopodium quinoa AUR62032118 SPL6: Squamosa promoter-binding-like protein 6 C_Quinoa_Scaffold_1177 + View
Chenopodium quinoa AUR62007890 SPL6: Squamosa promoter-binding-like protein 6 C_Quinoa_Scaffold_2646 + View
Capsella rubella Carub.0002s1577 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED scaffold_2 + View
Cucumis sativus L. CsaV3_1G003380 squamosa promoter-binding-like protein 6 chr1 + View
Cucumis sativus L. CsaV3_1G006200 Squamosa promoter binding-like protein chr1 - View
Daucus carota DCAR_014026 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_010171 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv34044 GWHABJS00000008 + View
Davidia involucrata Dinv17446 GWHABJS00000006 + View
Davidia involucrata Dinv20148 GWHABJS00000018 - View
Durio zibethinus Duzib248G0523 NW_019168048.1 - View
Durio zibethinus Duzib205G0956 NW_019168381.1 - View
Durio zibethinus Duzib068G0346 NW_019167838.1 - View
Durio zibethinus Duzib251G0443 NW_019167971.1 + View
Durio zibethinus Duzib268G0759 NW_019168270.1 + View
Erigeron canadensis ECA247G1198 Conyza_canadensis_scaffold:7 + View
Eucalyptus grandis Eucgr.K02545 Chr11 - View
Eucalyptus grandis Eucgr.B00631 Chr02 - View
Eutrema salsugineum Thhalv10018638m.g PTHR31251:SF22 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED scaffold_9 - View
Fragaria x ananassa FAN13G0517 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Fvb5-2 - View
Fragaria x ananassa FAN18G2921 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Fvb5-1 + View
Fragaria x ananassa FAN08G3039 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Fvb5-3 - View
Fragaria x ananassa FAN07G1821 PF03110 - SBP domain (SBP) Fvb4-4 - View
Fragaria x ananassa FAN17G2256 PF03110 - SBP domain (SBP) Fvb4-2 - View
Fragaria x ananassa FAN12G0833 PF03110 - SBP domain (SBP) Fvb4-3 - View
Fragaria x ananassa FAN22G2421 PF03110 - SBP domain (SBP) Fvb4-1 + View
Fragaria vesca FvH4_4g29640 PF03110 - SBP domain (SBP) Fvb4 + View
Fragaria vesca FvH4_5g13520 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Fvb5 + View
Gossypium hirsutum Gohir.D13G083900 PF03110 - SBP domain (SBP) D13 - View
Gossypium hirsutum Gohir.D02G130933 PF03110 - SBP domain (SBP) D02 - View
Gossypium hirsutum Gohir.A03G071200 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED A03 - View
Gossypium hirsutum Gohir.D03G097700 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED D03 - View
Gossypium hirsutum Gohir.A13G084300 PF03110 - SBP domain (SBP) A13 + View
Glycine max Glyma.05G019000 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Gm05 + View
Glycine max Glyma.04G159600 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Gm04 + View
Glycine max Glyma.06G205701 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Gm06 - View
Glycine max Glyma.02G121300 PF03110 - SBP domain (SBP) Gm02 - View
Glycine max Glyma.17G080700 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Gm17 - View
Glycine max Glyma.01G063700 PF03110 - SBP domain (SBP) Gm01 - View
Gossypium raimondii Gorai.005G146800 Chr05 - View
Gossypium raimondii Gorai.013G095700 Chr13 - View
Gossypium raimondii Gorai.003G102800 Chr03 - View
Hydrangea macrophylla Hma1.2p1_0060F.1_g032790 Hma1.2p1_0060F.1 + View
Lupinus albus Lalb_Chr07g0178391 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Lalb_Chr07 - View
Lupinus albus Lalb_Chr12g0197331 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Lalb_Chr12 - View
Lupinus albus Lalb_Chr04g0255501 PF03110 - SBP domain (SBP) Lalb_Chr04 + View
Lupinus albus Lalb_Chr13g0302751 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Lalb_Chr13 + View
Lotus japonicus Lj2g0018992 PF03110 - SBP domain (SBP) chr2 - View
Lotus japonicus Lj4g0023225 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED chr4 + View
Lonicera japonica Lj6C777T6 GWHAAZE00000006 + View
Lonicera japonica Lj9A438G55 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_4_113241 PTHR31251:SF22 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Lsat_1_v8_lg_4 - View
Malus domestica MD13G1059500 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein Chr13 + View
Malus domestica MD14G1215300 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein Chr14 - View
Malus domestica MD06G1204000 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein Chr06 - View
Malus domestica MD16G1058800 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein Chr16 + View
Manihot esculenta Manes.14G088200 Chromosome14 - View
Manihot esculenta Manes.01G026000 Chromosome01 + View
Manihot esculenta Manes.05G112200 Chromosome05 - View
Medicago truncatula Medtr4g109770 LIGULELESS 1 protein, putative chr4 - View
Medicago truncatula Medtr2g461920 LIGULELESS 1 protein, putative chr2 + View
Nelumbo nucifera Nn3g17511 chr3 - View
Nelumbo nucifera Nn4g23499 chr4 - View
Nicotiana tabacum Nitab4.5_0000027g0060 Transcription factor, SBP-box Nitab4.5_0000027 - View
Petunia axillaris Peaxi162Scf00175g00525 Squamosa promoter-binding-like protein 6 Peaxi162Scf00175 - View
Punica granatum PGR044G1979 NC_045134.1 + View
Punica granatum PGR083G1895 NC_045133.1 - View
Prunus persica Prupe.5G208300 Pp05 - View
Prunus persica Prupe.1G290200 Pp01 - View
Pisum sativum Psat4g046440 SBP domain chr4LG4 - View
Populus trichocarpa Potri.010G154000 PF03110 - SBP domain (SBP) Chr10 - View
Populus trichocarpa Potri.008G097900 PF03110 - SBP domain (SBP) Chr08 - View
Populus trichocarpa Potri.015G060400 PTHR31251//PTHR31251:SF22 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Chr15 - View
Phaseolus vulgaris Phvul.003G182900 PTHR31251:SF22 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED Chr03 + View
Phaseolus vulgaris Phvul.003G039600 PF03110 - SBP domain (SBP) Chr03 + View
Quercus lobata QL10p020226 10 - View
Quercus lobata QL03p073536 3 + View
Rosa chinensis RcHm_v2.0_Chr4g0437871 RcHm_v2.0_Chr4 + View
Rosa chinensis RcHm_v2.0_Chr7g0183471 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim12G0149900 chr12 - View
Rhododendron simsii Rhsim12G0073700 chr12 + View
Salix brachista Sabra10G0118600 GWHAAZH00000010 - View
Salix brachista Sabra08G0074100 GWHAAZH00000008 - View
Simmondsia chinensis Sc12g0007020 GWHAASQ00000012 + View
Sechium edule Sed0009479 LG08 - View
Sechium edule Sed0012987 LG12 - View
Sechium edule Sed0021567 LG08 - View
Sechium edule Sed0005575 LG01 + View
Solanum lycopersicum Solyc12g038520.3 Squamosa promoter binding protein 6c SL4.0ch12 - View
Solanum lycopersicum Solyc05g012040.4 Squamosa promoter binding protein 6b SL4.0ch05 + View
Solanum lycopersicum Solyc03g114850.4 Squamosa promoter binding protein 6a SL4.0ch03 + View
Schrenkiella parvula Sp5g24220 PTHR31251:SF22 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 15-RELATED ch5-6 + View
Solanum pennellii Sopen03g033930 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 14 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box | BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 14 Spenn-ch03 + View
Solanum pennellii Sopen05g006830 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 14 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box | BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 14 Spenn-ch05 + View
Solanum tuberosum PGSC0003DMG400028308 LIGULELESS1 protein ST4.03ch05 - View
Solanum tuberosum PGSC0003DMG400024527 LIGULELESS1 protein ST4.03ch03 + View
Selenicereus undatus Hund02562 Scaffold_33678 + View
Selenicereus undatus Hund05827 Scaffold_19641 + View
Selenicereus undatus Hund09947 Scaffold_10417 - View
Selenicereus undatus Hund25162 Scaffold_3410 - View
Trochodendron aralioides TAR622G0263 group8 + View
Trochodendron aralioides TAR629G3162 group0 + View
Trochodendron aralioides TAR374G1071 group12 - View
Theobroma cacao Thecc.03G106000 LIGULELESS1 protein Chromosome_3 - View
Theobroma cacao Thecc.02G326500 Squamosa promoter-binding protein-like transcription factor family protein Chromosome_2 + View
Tarenaya hassleriana THA.LOC104821997 squamosa promoter-binding-like protein 6 isoform X1 NW_010966617.1 + View
Trifolium pratense TPR.G1985 Tp57577_TGAC_v2_LG5 + View
Tripterygium wilfordii TWI39G0282 NC_052250.1 - View
Tripterygium wilfordii TWI31G1483 NC_052233.1 + View
Tripterygium wilfordii TWI81G1068 NC_052251.1 - View
Vaccinium macrocarpon vmacro16482 Similar to SPL6: Squamosa promoter-binding-like protein 6 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G2252 CM024074.1 - View
Vitis vinifera GSVIVG01012247001 chr1 + View