Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0037066 PREDICTED: translation initiation factor IF-2, chloroplastic-like [Nelumbo nucifera] Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G2030 LG-7 + View
Aethionema arabicum Aa31LG4G2620 LG-4 + View
Actinidia chinensis Actinidia20593 Lachesis_group5 - View
Actinidia chinensis Actinidia12334 Lachesis_group19 - View
Arabidopsis lyrata AL1G29460 scaffold_1 + View
Avicennia marina MSTRG.14998 ScioBoG_19538_HRSCAF_19626 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HGAE8N PTHR23115//PTHR23115:SF138 - TRANSLATION FACTOR // TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC arahy.Tifrunner.gnm1.Arahy.07 + View
Arabidopsis thaliana AT1G17220 Translation initiation factor 2, small GTP-binding protein Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal. fu-gaeri1 (FUG1)%3B FUNCTIONS IN: translation initiation factor activity%3B INVOLVED IN: translational initiation%3B LOCATED IN: chloroplast%2C chloroplast envelope%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Translation initiation factor IF-2%2C N-terminal (InterPro:IPR006847)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Translation elongation factor EFTu/EF1A%2C domain 2 (InterPro:IPR004161)%2C Translation initiation factor 2 related (InterPro:IPR015760)%2C Initiation factor 2 (InterPro:IPR000178)%2C Protein synthesis factor%2C GTP-binding (InterPro:IPR000795)%2C Translation elongation/initiation factor/Ribosomal%2C beta-barrel (InterPro:IPR009000)%3B BEST Arabidopsis thaliana protein match is: Translation initiation factor 2%2C small GTP-binding protein (TAIR:AT4G11160.1)%3B Has 64472 Blast hits to 64325 proteins in 4737 species: Archae - 1215%3B Bacteria - 42273%3B Metazoa - 2198%3B Fungi - 2344%3B Plants - 1110%3B Viruses - 4%3B Other Eukaryotes - 15328 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC07g38837 ChrC07 + View
Brassica carinata BcaB03g13012 ChrB03 - View
Brassica carinata BcaC05g25655 ChrC05 - View
Brassica carinata BcaB07g34040 ChrB07 - View
Brassica napus A08p31030 A08 - View
Brassica napus C08p17770 C08 + View
Brassica napus C05p15640 C05 + View
Brassica napus A06p13140 A06 + View
Brassica oleracea BolC5t30271H C5 + View
Brassica oleracea BolC8t49403H C8 + View
Brassica rapa BraA08t35032Z A08 - View
Brassica rapa BraA06t24472Z A06 + View
Corylus avellana Haze_08514 Similar to IF2CP: Translation initiation factor IF-2, chloroplastic (Phaseolus vulgaris OX%3D3885) 4 - View
Coffea canephora Cc05_g10020 Translation initiation factor IF-2, chloroplastic chr5 + View
Cardamine hirsuta CARHR017800 Translation initiation factor IF-2 Chr1 + View
Carica papaya Cpa.g.sc229.4 supercontig_229 + View
Capsella rubella Carub.0001s1697 PTHR23115//PTHR23115:SF138 - TRANSLATION FACTOR // TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC scaffold_1 + View
Daucus carota DCAR_017559 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv26637 GWHABJS00000013 - View
Davidia involucrata Dinv21344 GWHABJS00000001 + View
Erigeron canadensis ECA236G1750 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.F01432 Chr06 - View
Erythranthe guttata Migut.H02058 scaffold_8 + View
Erythranthe guttata Migut.M00670 scaffold_13 - View
Eutrema salsugineum Thhalv10006681m.g PTHR23115:SF138 - TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC scaffold_5 - View
Fragaria x ananassa FAN25G2027 PTHR23115//PTHR23115:SF138 - TRANSLATION FACTOR // TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC Fvb3-1 - View
Fragaria x ananassa FAN16G0016 PTHR23115//PTHR23115:SF138 - TRANSLATION FACTOR // TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC Fvb3-3 + View
Glycine max Glyma.08G174200 PTHR23115//PTHR23115:SF138 - TRANSLATION FACTOR // TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC Gm08 + View
Glycine max Glyma.15G253000 PTHR23115//PTHR23115:SF138 - TRANSLATION FACTOR // TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC Gm15 - View
Helianthus annuus HanXRQChr11g0330011 Probable translation initiation factor 2, small GTP-binding protein HanXRQChr11 - View
Lupinus albus Lalb_Chr25g0285241 K02519 - translation initiation factor IF-2 (infB, MTIF2) Lalb_Chr25 + View
Lotus japonicus Lj3g0011562 PTHR23115//PTHR23115:SF138 - TRANSLATION FACTOR // TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC chr3 - View
Lactuca sativa Lsat_1_v5_gn_7_99460 PTHR23115:SF138 - TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC Lsat_1_v8_lg_7 + View
Malus domestica MD10G1197600 Translation initiation factor 2 Chr10 - View
Nicotiana tabacum Nitab4.5_0001612g0100 Translation protein, beta-barrel domain, P-loop containing nucleoside triphosphate hydrolase, Translation initiation factor IF- 2, Translation initiation factor aIF-2, bacterial-like, Small GTP-binding protein domain, Elongation factor, GTP-binding domain, Translation initiation factor IF- 2, domain 3, Translation elongation factor EFTu/EF1A, domain 2 Nitab4.5_0001612 - View
Olea europaea Oeu012709.1 chr6 + View
Petunia axillaris Peaxi162Scf00111g00527 Translation initiation factor IF-2 Peaxi162Scf00111 + View
Punica granatum PGR031G0914 NC_045127.1 + View
Prunus persica Prupe.4G144300 PTHR23115:SF138 - TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC Pp04 + View
Populus trichocarpa Potri.011G140100 K02519 - translation initiation factor IF-2 (infB, MTIF2) Chr11 - View
Phaseolus vulgaris Phvul.005G054600 PTHR23115:SF138 - TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC Chr05 - View
Quercus lobata QL04p073059 4 + View
Rhododendron simsii Rhsim06G0183300 chr06 + View
Salvia bowleyana SalBow7G1447 GWHASIU00000005 - View
Salvia bowleyana SalBow7G2823 GWHASIU00000005 - View
Salix brachista Sabra11G0126200 GWHAAZH00000011 - View
Solanum lycopersicum Solyc07g056020.3 Translation initiation factor IF-2 (AHRD V3.3 *** A0A2G2Z4L1_CAPAN) SL4.0ch07 - View
Schrenkiella parvula Sp1g15360 PTHR23115//PTHR23115:SF138 - TRANSLATION FACTOR // TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC ch1-1 + View
Solanum pennellii Sopen07g029370 Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal. | fu-gaeri1 (FUG1) | FUNCTIONS IN: translation initiation factor activity | INVOLVED IN: translational initiation | LOCATED IN: chloroplast, chloroplast envelope | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Translation initiation factor IF-2, N-terminal , Small GTP-binding protein , Translation elongation factor EFTu/EF1A, domain 2 , Translation initiation factor 2 related , Initiation factor 2 , Protein synthesis factor, GTP-binding , Translation elongation/initiation factor/Ribosomal, beta-barrel | BEST Arabidopsis thaliana protein match is: Translation initiation factor 2, small GTP-binding protein Spenn-ch07 - View
Solanum tuberosum PGSC0003DMG400031088 Translation initiation factor IF-2 ST4.03ch07 + View
Tarenaya hassleriana THA.LOC104812285 translation initiation factor IF-2%2C chloroplastic-like NW_010965372.1 - View
Vaccinium macrocarpon vmacro12030 Similar to At1g17220: Translation initiation factor IF-2, chloroplastic (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro09449 Similar to At1g17220: Translation initiation factor IF-2, chloroplastic (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G0437 CM024079.1 - View