Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0006943 PREDICTED: low temperature-induced protein lt101.2-like [Nicotiana tomentosiformis] Chr6 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G19770 LG-2 - View
Acer truncatum Atru.chr7.26 chr7 + View
Actinidia chinensis Actinidia23558 Lachesis_group25 - View
Arabidopsis lyrata AL4G14094 scaffold_4 + View
Arabidopsis lyrata AL7G21480 scaffold_7 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1B50KW KOG1773 - Stress responsive protein arahy.Tifrunner.gnm1.Arahy.01 + View
Arabidopsis thaliana AT4G30650 Low temperature and salt responsive protein family Low temperature and salt responsive protein family%3B INVOLVED IN: response to salt stress%2C response to cold%2C hyperosmotic salinity response%2C defense response to fungus%3B LOCATED IN: endomembrane system%2C integral to membrane%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0057 (InterPro:IPR000612)%3B BEST Arabidopsis thaliana protein match is: Low temperature and salt responsive protein family (TAIR:AT4G30660.2)%3B Has 1315 Blast hits to 1315 proteins in 423 species: Archae - 0%3B Bacteria - 542%3B Metazoa - 42%3B Fungi - 322%3B Plants - 377%3B Viruses - 0%3B Other Eukaryotes - 32 (source: NCBI BLink). Chr4 + View
Brassica napus C07p58130 C07 + View
Brassica napus A04p18350 A04 + View
Brassica napus A03p60220 A03 + View
Brassica napus C01p08230 C01 - View
Brassica oleracea BolC1t00811H C1 - View
Brassica rapa BraA03t15062Z A03 + View
Cannabis sativa CANSAT11G2186 NC_044377.1 - View
Coffea canephora Cc06_g14800 UPF0057 membrane protein At2g24040 chr6 - View
Citrus clementina Ciclev10010088m.g scaffold_1 - View
Carpinus fangiana Cfa020809 Cfa08 - View
Cardamine hirsuta CARHR238530 Hydrophobic low temperature and salt responsive Chr7 + View
Cardamine hirsuta CARHR118310 Low temperature and salt responsive protein family Chr4 - View
Carya illinoinensis CiPaw.15G166700 KOG1773 - Stress responsive protein Chr15 - View
Citrullus lanatus ClCG02G014410 Low temperature and salt responsive protein CG_Chr02 - View
Chenopodium quinoa AUR62028340 At4g30650: UPF0057 membrane protein At4g30650 C_Quinoa_Scaffold_1426 + View
Capsella rubella Carub.0007s0990 PTHR21659 - HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED scaffold_7 - View
Cucumis sativus L. CsaV3_2G007590 UPF0057 membrane protein At4g30660 chr2 + View
Davidia involucrata Dinv43257 GWHABJS00000085 + View
Davidia involucrata Dinv42842 GWHABJS00000085 - View
Erigeron canadensis ECA236G0008 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.C00250 Chr03 - View
Erythranthe guttata Migut.J01366 scaffold_10 + View
Erythranthe guttata Migut.K00314 scaffold_11 - View
Eutrema salsugineum Thhalv10026719m.g PTHR21659 - HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED scaffold_1 - View
Eutrema salsugineum Thhalv10000507m.g PTHR21659 - HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED scaffold_15 + View
Fragaria x ananassa FAN23G3079 KOG1773 - Stress responsive protein Fvb1-3 + View
Fragaria x ananassa FAN26G1688 KOG1773 - Stress responsive protein Fvb1-2 + View
Fragaria x ananassa FAN28G2155 KOG1773 - Stress responsive protein Fvb1-1 + View
Fragaria vesca FvH4_1g00770 KOG1773 - Stress responsive protein Fvb1 - View
Glycine max Glyma.02G205102 PTHR21659 - HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED Gm02 + View
Hydrangea macrophylla Hma1.2p1_0222F.1_g093670 Hma1.2p1_0222F.1 + View
Lupinus albus Lalb_Chr13g0300801 KOG1773 - Stress responsive protein Lalb_Chr13 - View
Lotus japonicus Lj6g0000603 KOG1773 - Stress responsive protein chr6 - View
Lotus japonicus Lj4g0006985 KOG1773 - Stress responsive protein chr4 - View
Lactuca sativa Lsat_1_v5_gn_7_50060 PTHR21659 - HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED Lsat_1_v8_lg_7 + View
Lactuca sativa Lsat_1_v5_gn_8_63740 Lsat_1_v8_lg_8 + View
Malus domestica MD02G1006300 Low temperature and salt responsive protein family Chr02 - View
Malus domestica MD15G1151000 Low temperature and salt responsive protein family Chr15 - View
Manihot esculenta Manes.14G145000 Chromosome14 + View
Manihot esculenta Manes.06G035100 Chromosome06 - View
Medicago truncatula Medtr4g130660 low temperature and salt responsive family protein chr4 - View
Nelumbo nucifera Nn8g39958 chr8 + View
Petunia axillaris Peaxi162Scf00401g00423 Low temperature and salt responsive protein family Peaxi162Scf00401 - View
Punica granatum PGR142G1233 NC_045128.1 + View
Prunus persica Prupe.7G264600 PTHR21659 - HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED Pp07 + View
Populus trichocarpa Potri.006G182500 KOG1773 - Stress responsive protein Chr06 - View
Populus trichocarpa Potri.018G105100 KOG1773 - Stress responsive protein Chr18 - View
Phaseolus vulgaris Phvul.003G155150 PTHR21659 - HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED Chr03 - View
Quercus lobata QL02p093592 CM012294 + View
Sechium edule Sed0013455 LG03 - View
Solanum lycopersicum Solyc07g005715.1 Low temperature and salt responsive protein family (AHRD V3.3 -** AT4G30660.2) SL4.0ch07 + View
Schrenkiella parvula Sp7g28560 KOG1773 - Stress responsive protein ch7-5 + View
Solanum pennellii Sopen07g001830 Low temperature and salt responsive protein family | INVOLVED IN: response to cold, hyperosmotic salinity response | LOCATED IN: endomembrane system, integral to membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0057 | BEST Arabidopsis thaliana protein match is: Low temperature and salt responsive protein family Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG400011143 UPF0057 membrane protein ST4.03ch07 + View
Selenicereus undatus Hund08922 Scaffold_33676 + View
Theobroma cacao Thecc.09G028400 Low temperature and salt responsive protein family Chromosome_9 - View
Tripterygium wilfordii TWI34G1018 NC_052235.1 - View
Vaccinium macrocarpon vmacro06063 Similar to At2g24040: UPF0057 membrane protein At2g24040 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01023629001 chr11 + View