Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0044632 hypothetical protein CICLE_v10030683mg [Citrus clementina] Chr6 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G7770 LG-7 + View
Aethionema arabicum Aa31LG2G10170 LG-2 + View
Acer truncatum Atru.chr11.1995 chr11 - View
Arabidopsis lyrata AL1G37650 scaffold_1 + View
Arabidopsis lyrata AL2G16620 scaffold_2 + View
Avicennia marina MSTRG.606 ScioBoG_102831_HRSCAF_103044 + View
Avicennia marina MSTRG.7881 ScioBoG_102841_HRSCAF_103114 - View
Aquilegia oxysepala Aqoxy3G00960 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.095X5J K12391 - AP-1 complex subunit gamma-1 (AP1G1) arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MKS3V3 K12391 - AP-1 complex subunit gamma-1 (AP1G1) arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0K9FD0 K12391 - AP-1 complex subunit gamma-1 (AP1G1) arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3RZB0U K12391 - AP-1 complex subunit gamma-1 (AP1G1) arahy.Tifrunner.gnm1.Arahy.15 + View
Arabidopsis thaliana AT1G60070 Adaptor protein complex AP-1, gamma subunit Adaptor protein complex AP-1%2C gamma subunit%3B FUNCTIONS IN: protein transporter activity%2C clathrin binding%2C binding%3B INVOLVED IN: intracellular protein transport%2C vesicle-mediated transport%2C protein transport%3B LOCATED IN: membrane coat%2C Golgi apparatus part%2C Golgi apparatus%2C clathrin adaptor complex%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Adaptor protein complex AP-1%2C gamma subunit (InterPro:IPR017107)%2C Clathrin adaptor%2C alpha/beta/gamma-adaptin%2C appendage%2C Ig-like subdomain (InterPro:IPR008152)%2C Armadillo-like helical (InterPro:IPR011989)%2C Clathrin adaptor%2C gamma-adaptin%2C appendage (InterPro:IPR008153)%2C Clathrin/coatomer adaptor%2C adaptin-like%2C N-terminal (InterPro:IPR002553)%2C Armadillo-type fold (InterPro:IPR016024)%2C Clathrin/coatomer adaptor%2C adaptin-like%2C appendage%2C Ig-like subdomain (InterPro:IPR013041)%3B BEST Arabidopsis thaliana protein match is: gamma-adaptin 1 (TAIR:AT1G23900.2)%3B Has 3502 Blast hits to 3444 proteins in 304 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 1543%3B Fungi - 893%3B Plants - 386%3B Viruses - 0%3B Other Eukaryotes - 672 (source: NCBI BLink). Adaptor protein complex AP-1%2C gamma subunit%3B FUNCTIONS IN: protein transporter activity%2C clathrin binding%2C binding%3B INVOLVED IN: intracellular protein transport%2C vesicle-mediated transport%2C protein transport%3B LOCATED IN: membrane coat%2C Golgi apparatus part%2C Golgi apparatus%2C clathrin adaptor complex%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Adaptor protein complex AP-1%2C gamma subunit (InterPro:IPR017107)%2C Clathrin adaptor%2C alpha/beta/gamma-adaptin%2C appendage%2C Ig-like subdomain (InterPro:IPR008152)%2C Armadillo-like helical (InterPro:IPR011989)%2C Clathrin adaptor%2C gamma-adaptin%2C appendage (InterPro:IPR008153)%2C Armadillo-type fold (InterPro:IPR016024)%2C Clathrin/coatomer adaptor%2C adaptin-like%2C appendage%2C Ig-like subdomain (InterPro:IPR013041)%2C Clathrin/coatomer adaptor%2C adaptin-like%2C N-terminal (InterPro:IPR002553)%3B BEST Arabidopsis thaliana protein match is: gamma-adaptin 1 (TAIR:AT1G23900.2). Chr1 - View
Arabidopsis thaliana AT1G23900 gamma-adaptin 1 Encodes large subunit of the heterotetrameric adaptor protein complex AP-1. AP-1 is required for clathrin coated vesicles budding from the trans-Golgi network or plasma membrane gamma-adaptin 1 (GAMMA-ADAPTIN 1)%3B FUNCTIONS IN: protein transporter activity%2C clathrin binding%2C binding%3B INVOLVED IN: vesicle-mediated transport%3B LOCATED IN: AP-1 adaptor complex%3B CONTAINS InterPro DOMAIN/s: Adaptor protein complex AP-1%2C gamma subunit (InterPro:IPR017107)%2C Clathrin adaptor%2C alpha/beta/gamma-adaptin%2C appendage%2C Ig-like subdomain (InterPro:IPR008152)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%2C Clathrin adaptor%2C gamma-adaptin%2C appendage (InterPro:IPR008153)%2C Clathrin/coatomer adaptor%2C adaptin-like%2C appendage%2C Ig-like subdomain (InterPro:IPR013041)%2C Clathrin/coatomer adaptor%2C adaptin-like%2C N-terminal (InterPro:IPR002553)%3B BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-1%2C gamma subunit (TAIR:AT1G60070.1)%3B Has 3543 Blast hits to 3448 proteins in 308 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 1517%3B Fungi - 967%3B Plants - 387%3B Viruses - 0%3B Other Eukaryotes - 668 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB07g32364 ChrB07 + View
Brassica carinata BcaB04g20249 ChrB04 - View
Brassica carinata BcaC05g26293 ChrC05 + View
Brassica carinata BcaC09g49434 ChrC09 + View
Brassica napus C05p23090 C05 + View
Brassica napus A01p29050 A01 - View
Brassica napus A09p40930 A09 - View
Brassica napus C01p36770 C01 - View
Brassica napus C08p22150 C08 + View
Brassica oleracea BolC5t31007H C5 + View
Brassica oleracea BolC1t03636H C1 - View
Brassica rapa BraA09t39583Z A09 - View
Brassica rapa BraA01t02988Z A01 + View
Beta vulgaris EL10Ac6g13647 K12391 - AP-1 complex subunit gamma-1 (AP1G1) Chr6_EL10_PGA_scaffold0 - View
Cannabis sativa CANSAT01G0657 NC_044373.1 - View
Cicer arietinum L. Ca_22750_v3 Ca_LG7_v3 + View
Cicer arietinum L. Ca_04610_v3 Ca_LG2_v3 + View
Corylus avellana Haze_12151 Similar to At1g60070: AP-1 complex subunit gamma-2 (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc11_g14450 AP-1 complex subunit gamma-2 chr11 - View
Citrus clementina Ciclev10030683m.g scaffold_4 + View
Carpinus fangiana Cfa009113 Cfa03 + View
Cardamine hirsuta CARHR024300 AP-1 complex subunit gamma-2, putative Chr1 + View
Cardamine hirsuta CARHR052880 AP-1 complex subunit gamma-2 Chr2 + View
Carya illinoinensis CiPaw.06G073700 K12391 - AP-1 complex subunit gamma-1 (AP1G1) Chr06 - View
Carya illinoinensis CiPaw.05G147600 K12391 - AP-1 complex subunit gamma-1 (AP1G1) Chr05 + View
Citrullus lanatus ClCG05G025180 AP-1 complex subunit gamma-2, putative CG_Chr05 - View
Cucumis melo MELO3C012011.2 AP-1 complex subunit gamma-2, putative chr10 - View
Chenopodium quinoa AUR62005349 At1g60070: AP-1 complex subunit gamma-2 C_Quinoa_Scaffold_1214 - View
Chenopodium quinoa AUR62014001 At1g60070: AP-1 complex subunit gamma-2 C_Quinoa_Scaffold_3035 - View
Capsella rubella Carub.0002s0518 K12391 - AP-1 complex subunit gamma-1 (AP1G1) scaffold_2 + View
Capsella rubella Carub.0001s2339 K12391 - AP-1 complex subunit gamma-1 (AP1G1) scaffold_1 + View
Cucumis sativus L. CsaV3_5G031710 AP-1 complex subunit gamma chr5 + View
Daucus carota DCAR_031089 hypothetical protein DCARv2_Chr9 - View
Davidia involucrata Dinv24884 GWHABJS00000018 + View
Durio zibethinus Duzib251G0010 NW_019167971.1 - View
Durio zibethinus Duzib268G0481 NW_019168270.1 - View
Erythranthe guttata Migut.E00152 scaffold_5 - View
Erythranthe guttata Migut.L01430 scaffold_12 + View
Eutrema salsugineum Thhalv10023264m.g K12391 - AP-1 complex subunit gamma-1 (AP1G1) scaffold_8 + View
Eutrema salsugineum Thhalv10006767m.g K12391 - AP-1 complex subunit gamma-1 (AP1G1) scaffold_5 - View
Fragaria x ananassa FAN22G0046 PTHR22780//PTHR22780:SF27 - ADAPTIN, ALPHA/GAMMA/EPSILON // SUBFAMILY NOT NAMED Fvb4-1 + View
Fragaria x ananassa FAN07G2647 PTHR22780//PTHR22780:SF27 - ADAPTIN, ALPHA/GAMMA/EPSILON // SUBFAMILY NOT NAMED Fvb4-4 - View
Fragaria x ananassa FAN12G0668 PTHR22780//PTHR22780:SF27 - ADAPTIN, ALPHA/GAMMA/EPSILON // SUBFAMILY NOT NAMED Fvb4-3 - View
Fragaria x ananassa FAN17G2555 K12391 - AP-1 complex subunit gamma-1 (AP1G1) Fvb4-2 - View
Fragaria vesca FvH4_4g34830 K12391 - AP-1 complex subunit gamma-1 (AP1G1) Fvb4 + View
Gossypium hirsutum Gohir.A03G141000 K12391 - AP-1 complex subunit gamma-1 (AP1G1) A03 + View
Gossypium hirsutum Gohir.D02G163900 K12391 - AP-1 complex subunit gamma-1 (AP1G1) D02 + View
Glycine max Glyma.18G135351 PTHR22780//PTHR22780:SF27 - ADAPTIN, ALPHA/GAMMA/EPSILON // SUBFAMILY NOT NAMED Gm18 - View
Glycine max Glyma.08G289100 K12391 - AP-1 complex subunit gamma-1 (AP1G1) Gm08 + View
Glycine max Glyma.01G032100 K12391 - AP-1 complex subunit gamma-1 (AP1G1) Gm01 + View
Glycine max Glyma.02G033300 K12391 - AP-1 complex subunit gamma-1 (AP1G1) Gm02 - View
Gossypium raimondii Gorai.005G183900 Chr05 + View
Helianthus annuus HanXRQChr12g0383371 Probable adaptor protein complex AP-1, gamma subunit HanXRQChr12 + View
Helianthus annuus HanXRQChr17g0570221 Probable AP-1 complex subunit gamma-1 HanXRQChr17 + View
Lupinus albus Lalb_Chr05g0227851 PTHR22780//PTHR22780:SF27 - ADAPTIN, ALPHA/GAMMA/EPSILON // SUBFAMILY NOT NAMED Lalb_Chr05 + View
Lupinus albus Lalb_Chr16g0382361 PTHR22780//PTHR22780:SF27 - ADAPTIN, ALPHA/GAMMA/EPSILON // SUBFAMILY NOT NAMED Lalb_Chr16 + View
Lupinus albus Lalb_Chr05g0217021 K12391 - AP-1 complex subunit gamma-1 (AP1G1) Lalb_Chr05 + View
Lotus japonicus Lj2g0010189 K12391 - AP-1 complex subunit gamma-1 (AP1G1) chr2 + View
Lonicera japonica Lj3C1051G4 GWHAAZE00000003 - View
Lonicera japonica Lj6C803G6 GWHAAZE00000006 - View
Malus domestica MD16G1089500 Adaptor protein complex AP-1 Chr16 - View
Malus domestica MD13G1089300 Adaptor protein complex AP-1 Chr13 - View
Manihot esculenta Manes.05G088300 Chromosome05 + View
Manihot esculenta Manes.01G198500 Chromosome01 - View
Medicago truncatula Medtr8g063690 AP-1 complex subunit gamma-2 chr8 - View
Medicago truncatula Medtr5g034780 AP-1 complex subunit gamma-2 chr5 + View
Nelumbo nucifera Nn3g16925 chr3 + View
Nelumbo nucifera Nn4g22838 chr4 + View
Olea europaea Oeu039476.1 chr12 + View
Olea europaea Oeu001748.1 chr1 + View
Petunia axillaris Peaxi162Scf00421g00122 AP-1 complex subunit gamma-2 Peaxi162Scf00421 + View
Punica granatum PGR119G1498 NC_045132.1 - View
Prunus persica Prupe.1G256500 K12391 - AP-1 complex subunit gamma-1 (AP1G1) Pp01 + View
Papaver somniferum PSO063G4361 NC_039364.1 + View
Phaseolus vulgaris Phvul.003G053300 K12391 - AP-1 complex subunit gamma-1 (AP1G1) Chr03 + View
Phaseolus vulgaris Phvul.002G072600 K12391 - AP-1 complex subunit gamma-1 (AP1G1) Chr02 + View
Quercus lobata QL03p061898 3 + View
Rosa chinensis RcHm_v2.0_Chr4g0444171 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim12G0047900 chr12 + View
Striga asiatica SGA_v2.0_scaffold87G27014 scaffold87 - View
Salvia bowleyana SalBow8G4564 GWHASIU00000004 + View
Salvia bowleyana SalBow2G0004 GWHASIU00000007 + View
Simmondsia chinensis Sc04g0009010 GWHAASQ00000004 - View
Simmondsia chinensis Sc11g0001280 GWHAASQ00000011 + View
Sechium edule Sed0009259 LG04 + View
Sechium edule Sed0022852 LG06 - View
Solanum lycopersicum Solyc04g025870.4 AP-1 complex subunit gamma-1 (AHRD V3.3 *** A0A2G3CGI0_CAPCH) SL4.0ch04 + View
Solanum lycopersicum Solyc05g005780.3 AP-1 complex subunit gamma (AHRD V3.3 *** A0A2G2VMC8_CAPBA) SL4.0ch05 + View
Schrenkiella parvula Sp1g21250 K12391 - AP-1 complex subunit gamma-1 (AP1G1) ch1-1 + View
Solanum pennellii Sopen05g001780 Adaptor protein complex AP-1, gamma subunit | FUNCTIONS IN: protein transporter activity, clathrin binding, binding | INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport | LOCATED IN: membrane coat, Golgi apparatus part, Golgi apparatus, clathrin adaptor complex | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Adaptor protein complex AP-1, gamma subunit , Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain , Armadillo-like helical , Clathrin adaptor, gamma-adaptin, appendage , Armadillo-type fold , Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain , Clathrin/coatomer adaptor, adaptin-like, N-terminal | BEST Arabidopsis thaliana protein match is: gamma-adaptin 1 . Spenn-ch05 + View
Solanum tuberosum PGSC0003DMG400004116 AP-1 complex subunit gamma-2 ST4.03ch05 - View
Selenicereus undatus Hund25335 Scaffold_3410 - View
Selenicereus undatus Hund05973 Scaffold_19641 - View
Trochodendron aralioides TAR374G1447 group12 - View
Trochodendron aralioides TAR371G0396 group13 + View
Trochodendron aralioides TAR622G1265 group8 - View
Trochodendron aralioides TAR629G2238 group0 - View
Theobroma cacao Thecc.02G246200 Adaptor protein complex AP-1 Chromosome_2 + View
Tarenaya hassleriana THA.LOC104822131 AP-1 complex subunit gamma-1 isoform X1 NW_010966617.1 - View
Tarenaya hassleriana THA.LOC104819479 AP-1 complex subunit gamma-2 isoform X1 NW_010960187.1 - View
Tripterygium wilfordii TWI36G1374 NC_052237.1 + View
Tripterygium wilfordii TWI18G0795 NC_052241.1 - View
Vaccinium macrocarpon vmacro01188 Similar to At1g60070: AP-1 complex subunit gamma-2 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01020209001 chr1 - View