Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Aethionema arabicum | Aa31LG8G9810 | LG-8 | + | View | |
| Aethionema arabicum | Aa31LG9G2950 | LG-9 | + | View | |
| Acer truncatum | Atru.chr4.2052 | chr4 | - | View | |
| Actinidia chinensis | Actinidia39906 | Lachesis_group17 | + | View | |
| Arabidopsis lyrata | AL3G37926 | scaffold_3 | + | View | |
| Arabidopsis lyrata | AL7G41850 | scaffold_7 | + | View | |
| Avicennia marina | MSTRG.9888 | ScioBoG_12795_HRSCAF_12848 | - | View | |
| Amaranthus hybridus | Ah.04g155730 | AmaHy_arrow1_Scaffold_4 | - | View | |
| Aquilegia oxysepala | Aqoxy5G00223 | CHR05 | - | View | |
| Arabidopsis thaliana | AT4G14368 | Regulator of chromosome condensation (RCC1) family protein Regulator of chromosome condensation (RCC1) family protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091)%2C Zinc finger%2C FYVE-type (InterPro:IPR000306)%2C Zinc finger%2C FYVE-related (InterPro:IPR017455)%2C Regulator of chromosome condensation%2C RCC1 (InterPro:IPR000408)%2C Pleckstrin homology-type (InterPro:IPR011993)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%3B BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT3G23270.1)%3B Has 23075 Blast hits to 9219 proteins in 606 species: Archae - 56%3B Bacteria - 2851%3B Metazoa - 9367%3B Fungi - 1087%3B Plants - 2969%3B Viruses - 60%3B Other Eukaryotes - 6685 (source: NCBI BLink). | Chr4 | - | View |
| Arabidopsis thaliana | AT3G23270 | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain%3B CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation%2C RCC1 (InterPro:IPR000408)%2C Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591)%2C Pleckstrin homology (InterPro:IPR001849)%2C Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091)%2C Zinc finger%2C FYVE-type (InterPro:IPR000306)%2C Zinc finger%2C FYVE-related (InterPro:IPR017455)%2C Pleckstrin homology-type (InterPro:IPR011993)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%3B BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family protein (TAIR:AT4G14368.1)%3B Has 25157 Blast hits to 10467 proteins in 596 species: Archae - 58%3B Bacteria - 2385%3B Metazoa - 9739%3B Fungi - 1750%3B Plants - 3215%3B Viruses - 10%3B Other Eukaryotes - 8000 (source: NCBI BLink). | Chr3 | + | View |
| Brassica carinata | BcaB02g08613 | ChrB02 | + | View | |
| Brassica carinata | BcaB04g20458 | ChrB04 | - | View | |
| Brassica carinata | BcaB06g26467 | ChrB06 | + | View | |
| Brassica napus | A07p09220 | A07 | - | View | |
| Brassica napus | C04p41360 | C04 | + | View | |
| Brassica oleracea | BolC7t41917H | C7 | - | View | |
| Brassica rapa | BraA07t28718Z | A07 | - | View | |
| Cannabis sativa | CANSAT78G0089 | NC_044376.1 | - | View | |
| Cicer arietinum L. | Ca_11987_v3 | Ca_LG4_v3 | - | View | |
| Corylus avellana | Haze_11389 | Similar to PRAF1: PH, RCC1 and FYVE domains-containing protein 1 (Arabidopsis thaliana OX%3D3702) | 9 | + | View |
| Coffea canephora | Cc03_g05590 | Putative Probable E3 ubiquitin-protein ligase HERC1 | chr3 | + | View |
| Citrus clementina | Ciclev10004207m.g | scaffold_9 | + | View | |
| Cardamine hirsuta | CARHR220590 | Regulator of chromosome condensation (RCC1) family protein | Chr7 | - | View |
| Carya illinoinensis | CiPaw.02G111600 | PF00415//PF01363 - Regulator of chromosome condensation (RCC1) repeat (RCC1) // FYVE zinc finger (FYVE) | Chr02 | - | View |
| Carya illinoinensis | CiPaw.01G183800 | PTHR22870//PTHR22870:SF87 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION REPEAT-CONTAINING PROTEIN-RELATED | Chr01 | - | View |
| Corchorus olitorius | COL.COLO4_15883 | Zinc finger%2C FYVE-type | AWUE01015837.1 | + | View |
| Carica papaya | Cpa.g.sc44.49 | supercontig_44 | - | View | |
| Chenopodium quinoa | AUR62002142 | HERC1: Probable E3 ubiquitin-protein ligase HERC1 | C_Quinoa_Scaffold_4480 | + | View |
| Chenopodium quinoa | AUR62015566 | HERC1: Probable E3 ubiquitin-protein ligase HERC1 | C_Quinoa_Scaffold_2751 | - | View |
| Capsella rubella | Carub.0007s2788 | PTHR22870:SF87 - REGULATOR OF CHROMOSOME CONDENSATION REPEAT-CONTAINING PROTEIN-RELATED | scaffold_7 | + | View |
| Capsella rubella | Carub.0003s2351 | PTHR22870:SF87 - REGULATOR OF CHROMOSOME CONDENSATION REPEAT-CONTAINING PROTEIN-RELATED | scaffold_3 | + | View |
| Davidia involucrata | Dinv27055 | GWHABJS00000014 | - | View | |
| Davidia involucrata | Dinv29856 | GWHABJS00000016 | - | View | |
| Durio zibethinus | Duzib052G0030 | NW_019167849.1 | + | View | |
| Durio zibethinus | Duzib151G0247 | NW_019167904.1 | + | View | |
| Eucalyptus grandis | Eucgr.H00152 | Chr08 | - | View | |
| Eutrema salsugineum | Thhalv10019964m.g | PTHR22870:SF87 - REGULATOR OF CHROMOSOME CONDENSATION REPEAT-CONTAINING PROTEIN-RELATED | scaffold_13 | - | View |
| Eutrema salsugineum | Thhalv10026933m.g | PTHR22870:SF87 - REGULATOR OF CHROMOSOME CONDENSATION REPEAT-CONTAINING PROTEIN-RELATED | scaffold_1 | + | View |
| Fragaria x ananassa | FAN12G0299 | PF00076//PF00415//PF01363//PF08381//PF13713 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Regulator of chromosome condensation (RCC1) repeat (RCC1) // FYVE zinc finger (FYVE) // Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) | Fvb4-3 | - | View |
| Fragaria x ananassa | FAN22G2032 | PTHR22870//PTHR22870:SF87 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION REPEAT-CONTAINING PROTEIN-RELATED | Fvb4-1 | + | View |
| Fragaria x ananassa | FAN17G0322 | PTHR22870:SF87 - REGULATOR OF CHROMOSOME CONDENSATION REPEAT-CONTAINING PROTEIN-RELATED | Fvb4-2 | - | View |
| Fragaria vesca | FvH4_4g03710 | PTHR22870:SF87 - REGULATOR OF CHROMOSOME CONDENSATION REPEAT-CONTAINING PROTEIN-RELATED | Fvb4 | + | View |
| Gossypium hirsutum | Gohir.D09G230700 | PTHR22870:SF87 - REGULATOR OF CHROMOSOME CONDENSATION REPEAT-CONTAINING PROTEIN-RELATED | D09 | - | View |
| Gossypium hirsutum | Gohir.A09G229700 | PTHR22870:SF87 - REGULATOR OF CHROMOSOME CONDENSATION REPEAT-CONTAINING PROTEIN-RELATED | A09 | - | View |
| Gossypium raimondii | Gorai.006G253400 | Chr06 | - | View | |
| Helianthus annuus | HanXRQChr13g0421981 | Probable regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain | HanXRQChr13 | + | View |
| Hydrangea macrophylla | Hma1.2p1_0267F.1_g107240 | Hma1.2p1_0267F.1 | - | View | |
| Hydrangea macrophylla | Hma1.2p1_0992F.1_g245220 | Hma1.2p1_0992F.1 | + | View | |
| Lotus japonicus | Lj6g0008458 | PTHR22870//PTHR22870:SF87 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION REPEAT-CONTAINING PROTEIN-RELATED | chr6 | + | View |
| Lonicera japonica | Lj6A635T63 | GWHAAZE00000006 | - | View | |
| Lonicera japonica | Lj3A693G72 | GWHAAZE00000003 | - | View | |
| Magnolia biondii | MBI10_g23172_MAGBIO | AED:0.02 | Chr10 | - | View |
| Malus domestica | MD16G1219800 | Regulator of chromosome condensation (RCC1) family protein | Chr16 | + | View |
| Malus domestica | MD13G1214600 | Regulator of chromosome condensation (RCC1) family protein | Chr13 | + | View |
| Manihot esculenta | Manes.15G041300 | Chromosome15 | + | View | |
| Medicago truncatula | Medtr1g042800 | chromosome condensation regulator RCC1 repeat protein | chr1 | + | View |
| Nicotiana tabacum | Nitab4.5_0001441g0120 | Pleckstrin homology-like domain | Nitab4.5_0001441 | + | View |
| Olea europaea | Oeu059421.1 | scaffold810 | - | View | |
| Olea europaea | Oeu055233.2 | scaffold69 | + | View | |
| Punica granatum | PGR031G3790 | NC_045127.1 | + | View | |
| Prunus persica | Prupe.1G040100 | PTHR22870:SF87 - REGULATOR OF CHROMOSOME CONDENSATION REPEAT-CONTAINING PROTEIN-RELATED | Pp01 | + | View |
| Papaver somniferum | PSO063G5606 | NC_039364.1 | + | View | |
| Papaver somniferum | PSO017G2993 | NC_039362.1 | + | View | |
| Populus trichocarpa | Potri.008G167500 | PTHR22870:SF87 - REGULATOR OF CHROMOSOME CONDENSATION REPEAT-CONTAINING PROTEIN-RELATED | Chr08 | + | View |
| Phaseolus vulgaris | Phvul.007G273900 | Chr07 | - | View | |
| Quercus lobata | QL06p018126 | 6 | + | View | |
| Rosa chinensis | RcHm_v2.0_Chr4g0393321 | RcHm_v2.0_Chr4 | + | View | |
| Rhododendron simsii | Rhsim02G0037600 | chr02 | + | View | |
| Striga asiatica | SGA_v2.0_scaffold67G22741 | scaffold67 | - | View | |
| Salix brachista | Sabra08G0127600 | GWHAAZH00000008 | + | View | |
| Simmondsia chinensis | Sc19g0003700 | GWHAASQ00000019 | + | View | |
| Solanum lycopersicum | Solyc03g005590.2 | Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** A0A1P8B4Z7_ARATH) | SL4.0ch03 | - | View |
| Schrenkiella parvula | Sp3g20920 | PF00415//PF01363 - Regulator of chromosome condensation (RCC1) repeat (RCC1) // FYVE zinc finger (FYVE) | ch3-1 | + | View |
| Solanum pennellii | Sopen03g001590 | Regulator of chromosome condensation (RCC1) family protein | FUNCTIONS IN: zinc ion binding | CONTAINS InterPro DOMAIN/s: Regulator of chromosome condensation/beta-lactamase-inhibitor protein II , Zinc finger, FYVE-type , Zinc finger, FYVE-related , Regulator of chromosome condensation, RCC1 , Pleckstrin homology-type , Zinc finger, FYVE/PHD-type | BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain | Spenn-ch03 | - | View |
| Solanum tuberosum | PGSC0003DMG400013453 | Ran GTPase binding protein | ST4.03ch03 | - | View |
| Selenicereus undatus | Hund03042 | Scaffold_19641 | + | View | |
| Theobroma cacao | Thecc.04G256200 | Regulator of chromosome condensation (RCC1) family protein | Chromosome_4 | + | View |
| Tarenaya hassleriana | THA.LOC104808625 | uncharacterized protein LOC104808625 | NW_010964923.1 | + | View |
| Tarenaya hassleriana | THA.LOC104822243 | uncharacterized protein LOC104822243 | NW_010966665.1 | - | View |
| Tripterygium wilfordii | TWI09G0008 | NC_052245.1 | - | View | |
| Tripterygium wilfordii | TWI53G0032 | NC_052244.1 | - | View | |
| Tripterygium wilfordii | TWI73G1287 | NC_052232.1 | + | View | |
| Vaccinium macrocarpon | vmacro15445 | Similar to PRAF1: PH, RCC1 and FYVE domains-containing protein 1 (Arabidopsis thaliana OX%3D3702) | chr4_Vaccinium_macrocarpon_Stevens_v1 | - | View |
| Vitis vinifera | GSVIVG01027823001 | chr5 | + | View |