Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0011472 PREDICTED: probable pectate lyase 15-like [Fragaria vesca subsp. vesca] Chr9 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G20200 LG-1 + View
Acer truncatum Atru.chr4.1792 chr4 + View
Actinidia chinensis Actinidia39951 Lachesis_group17 - View
Actinidia chinensis Actinidia11391 Lachesis_group21 - View
Actinidia chinensis Actinidia35948 Lachesis_group8 + View
Arabidopsis lyrata AL1G14390 scaffold_1 - View
Avicennia marina MSTRG.9836 ScioBoG_12795_HRSCAF_12848 + View
Avicennia marina MSTRG.4205 ScioBoG_102837_HRSCAF_103074 - View
Avicennia marina MSTRG.21944 ScioBoG_3008_HRSCAF_3015 - View
Avicennia marina MSTRG.24634 ScioBoG_4088_HRSCAF_4107 + View
Amaranthus hybridus Ah.04g153320 AmaHy_arrow1_Scaffold_4 - View
Arabidopsis thaliana AT1G04680 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: lyase activity%2C pectate lyase activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C AmbAllergen (InterPro:IPR018082)%2C Pectate lyase/Amb allergen (InterPro:IPR002022)%2C Pectin lyase fold (InterPro:IPR012334)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT4G13710.1)%3B Has 1635 Blast hits to 1625 proteins in 268 species: Archae - 0%3B Bacteria - 682%3B Metazoa - 0%3B Fungi - 239%3B Plants - 706%3B Viruses - 0%3B Other Eukaryotes - 8 (source: NCBI BLink). Chr1 - View
Brassica napus C05p02880 C05 - View
Brassica napus A04p08850 A04 - View
Brassica napus A10p03110 A10 - View
Corylus avellana Haze_11555 Similar to At4g13710: Probable pectate lyase 15 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc03_g07230 Probable pectate lyase 15 chr3 - View
Coffea canephora Cc01_g17310 Probable pectate lyase 8 chr1 + View
Citrus clementina Ciclev10019202m.g scaffold_3 + View
Citrus clementina Ciclev10004783m.g scaffold_9 - View
Ceratophyllum demersum CDE06G0424 4 + View
Cardamine hirsuta CARHR004060 Pectate lyase family protein Chr1 - View
Carya illinoinensis CiPaw.03G152000 PTHR31683//PTHR31683:SF20 - FAMILY NOT NAMED // PECTATE LYASE 1-RELATED Chr03 - View
Citrullus lanatus ClCG05G003590 Pectate lyase CG_Chr05 + View
Cucumis melo MELO3C023087.2 Pectate lyase chr05 + View
Cucumis melo MELO3C006338.2 Pectate lyase chr06 + View
Carica papaya Cpa.g.sc8.183 supercontig_8 + View
Carica papaya Cpa.g.sc59.92 supercontig_59 - View
Chenopodium quinoa AUR62035304 At4g13710: Probable pectate lyase 15 C_Quinoa_Scaffold_2909 + View
Capsella rubella Carub.0001s0393 PTHR31683:SF20 - PECTATE LYASE 1-RELATED scaffold_1 - View
Cucumis sativus L. CsaV3_3G011280 Pectate lyase chr3 + View
Daucus carota DCAR_002272 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_030780 hypothetical protein DCARv2_Chr9 - View
Davidia involucrata Dinv38280 GWHABJS00000016 - View
Durio zibethinus Duzib268G1345 NW_019168270.1 + View
Durio zibethinus Duzib211G0664 NW_019168049.1 - View
Erigeron canadensis ECA247G1758 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA233G2752 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.H00093 Chr08 + View
Eucalyptus grandis Eucgr.H02860 Chr08 + View
Erythranthe guttata Migut.G00620 scaffold_7 - View
Erythranthe guttata Migut.N00338 scaffold_14 - View
Fragaria x ananassa FAN17G1606 PTHR31683//PTHR31683:SF20 - FAMILY NOT NAMED // PECTATE LYASE 1-RELATED Fvb4-2 + View
Fragaria x ananassa FAN22G1372 PTHR31683//PTHR31683:SF20 - FAMILY NOT NAMED // PECTATE LYASE 1-RELATED Fvb4-1 - View
Fragaria x ananassa FAN07G0406 Fvb4-4 + View
Gossypium hirsutum Gohir.D11G142100 PTHR31683:SF20 - PECTATE LYASE 1-RELATED D11 - View
Gossypium hirsutum Gohir.A10G121300 PTHR31683:SF20 - PECTATE LYASE 1-RELATED A10 - View
Gossypium hirsutum Gohir.A11G135800 PTHR31683:SF20 - PECTATE LYASE 1-RELATED A11 - View
Gossypium hirsutum Gohir.A09G202300 PTHR31683:SF20 - PECTATE LYASE 1-RELATED A09 - View
Gossypium hirsutum Gohir.D09G196300 PTHR31683:SF20 - PECTATE LYASE 1-RELATED D09 - View
Gossypium hirsutum Gohir.D10G145000 PTHR31683:SF20 - PECTATE LYASE 1-RELATED D10 + View
Glycine max Glyma.20G077300 PTHR31683:SF20 - PECTATE LYASE 1-RELATED Gm20 + View
Glycine max Glyma.10G125000 PTHR31683:SF20 - PECTATE LYASE 1-RELATED Gm10 + View
Gossypium raimondii Gorai.011G161900 Chr11 + View
Gossypium raimondii Gorai.006G219800 Chr06 - View
Gossypium raimondii Gorai.007G152500 Chr07 - View
Lupinus albus Lalb_Chr01g0010821 PTHR31683//PTHR31683:SF20 - FAMILY NOT NAMED // PECTATE LYASE 1-RELATED Lalb_Chr01 + View
Lupinus albus Lalb_Chr19g0128771 PTHR31683:SF20 - PECTATE LYASE 1-RELATED Lalb_Chr19 - View
Lupinus albus Lalb_Chr03g0036661 PTHR31683//PTHR31683:SF20 - FAMILY NOT NAMED // PECTATE LYASE 1-RELATED Lalb_Chr03 + View
Lotus japonicus Lj6g0025784 PTHR31683:SF20 - PECTATE LYASE 1-RELATED chr6 - View
Lonicera japonica Lj6A611G51 GWHAAZE00000006 - View
Lactuca sativa Lsat_1_v5_gn_0_4881 PTHR31683:SF20 - PECTATE LYASE 1-RELATED Lsat_1_v8_lg_1 + View
Malus domestica MD05G1179500 Pectin lyase-like superfamily protein Chr05 + View
Malus domestica MD16G1236000 Pectin lyase-like superfamily protein Chr16 + View
Manihot esculenta Manes.15G048700 Chromosome15 - View
Manihot esculenta Manes.03G152600 Chromosome03 + View
Medicago truncatula Medtr1g047370 pectate lyase family protein chr1 + View
Nelumbo nucifera Nn3g19890 chr3 - View
Petunia axillaris Peaxi162Scf00047g01322 Pectin lyase-like superfamily protein Peaxi162Scf00047 + View
Prunus persica Prupe.1G060900 Pp01 - View
Populus trichocarpa Potri.003G175900 PTHR31683:SF20 - PECTATE LYASE 1-RELATED Chr03 - View
Phaseolus vulgaris Phvul.007G236800 PTHR31683:SF20 - PECTATE LYASE 1-RELATED Chr07 + View
Quercus lobata QL06p023258 6 - View
Rosa chinensis RcHm_v2.0_Chr4g0396921 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim09G0049600 chr09 - View
Rhododendron simsii Rhsim02G0053200 chr02 - View
Striga asiatica SGA_v2.0_scaffold31G12599 scaffold31 + View
Salvia bowleyana SalBow3G3628 GWHASIU00000006 + View
Salix brachista Sabra01G0036800 GWHAAZH00000001 + View
Salix brachista Sabra03G0128800 GWHAAZH00000003 - View
Simmondsia chinensis Sc13g0002760 GWHAASQ00000013 + View
Sechium edule Sed0018537 LG12 + View
Sechium edule Sed0020002 LG02 - View
Solanum lycopersicum Solyc09g091430.4 Pectate lyase (AHRD V3.3 *** A0A2G2W1U1_CAPBA) SL4.0ch09 - View
Schrenkiella parvula Sp1g03520 PTHR31683//PTHR31683:SF20 - FAMILY NOT NAMED // PECTATE LYASE 1-RELATED ch1-1 - View
Solanum pennellii Sopen09g034360 Pectin lyase-like superfamily protein | FUNCTIONS IN: lyase activity, pectate lyase activity | INVOLVED IN: biological_process unknown | LOCATED IN: endomembrane system | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , AmbAllergen , Pectate lyase/Amb allergen , Pectin lyase fold | BEST Arabidopsis thaliana protein match is: Pectate lyase family protein ., Pectate lyase precursor (EC 4.2.2.2) - Lilium longiflorum (Trumpet lily), Pectin lyase fold Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400029645 Pectase lyase ST4.03ch09 - View
Trochodendron aralioides TAR636G3395 group1 + View
Trochodendron aralioides TAR362G0384 group17 - View
Theobroma cacao Thecc.04G211500 Pectin lyase-like superfamily protein Chromosome_4 + View
Tarenaya hassleriana THA.LOC104801050 probable pectate lyase 1 NW_010969548.1 + View
Tarenaya hassleriana THA.LOC104808727 probable pectate lyase 15 NW_010964923.1 + View
Tripterygium wilfordii TWI73G0957 NC_052232.1 - View
Tripterygium wilfordii TWI09G0887 NC_052245.1 + View
Vaccinium macrocarpon vmacro00513 Similar to At4g13710: Probable pectate lyase 15 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro15502 Similar to At4g13710: Probable pectate lyase 15 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G0460 CM024071.1 + View
Vitis vinifera GSVIVG01029048001 chr5 - View