Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0045621 60S ribosomal protein L11, putative [Ricinus communis] Chr8 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G13310 LG-10 + View
Acer truncatum Atru.chr6.2764 chr6 - View
Acer truncatum Atru.chr10.1590 chr10 - View
Actinidia chinensis Actinidia10948 Lachesis_group19 - View
Actinidia chinensis Actinidia39517 Lachesis_group17 + View
Actinidia chinensis Actinidia11164 Lachesis_group5 - View
Arabidopsis lyrata AL4G41320 scaffold_4 + View
Avicennia marina MSTRG.15084 ScioBoG_19538_HRSCAF_19626 - View
Avicennia marina MSTRG.6782 ScioBoG_102840_HRSCAF_103099 - View
Amaranthus hybridus Ah.01g015890 AmaHy_arrow1_Scaffold_1 + View
Aquilegia oxysepala Aqoxy1G02003 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QQZY3Q K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) arahy.Tifrunner.gnm1.Arahy.20 - View
Arabidopsis thaliana AT2G42740 ribosomal protein large subunit 16A encodes a cytosolic ribosomal protein L16%2C which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment. ribosomal protein large subunit 16A (RPL16A)%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic large ribosomal subunit%2C nucleolus%2C chloroplast%2C vacuole%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132)%2C Ribosomal protein L5%2C conserved site (InterPro:IPR020929)%2C Ribosomal protein L5%2C N-terminal (InterPro:IPR020927)%2C Ribosomal protein L5%2C C-terminal (InterPro:IPR020928)%3B BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT5G45775.2)%3B Has 7901 Blast hits to 7901 proteins in 2837 species: Archae - 312%3B Bacteria - 5129%3B Metazoa - 255%3B Fungi - 163%3B Plants - 278%3B Viruses - 0%3B Other Eukaryotes - 1764 (source: NCBI BLink). Chr2 + View
Brassica napus C06p25660 C06 + View
Brassica oleracea BolC6t37729H C6 + View
Beta vulgaris EL10Ac9g20984 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Chr9_EL10_PGA_scaffold8 + View
Capsicum annuum CAN.G1360.17 PGAv.1.6.scaffold1360 - View
Cannabis sativa CANSAT64G1245 NC_044379.1 + View
Corylus avellana Haze_13427 Similar to RPL11B: 60S ribosomal protein L11-2 (Arabidopsis thaliana OX%3D3702) 5 + View
Corylus avellana Haze_06193 Similar to RPL11: 60S ribosomal protein L11 (Oryza sativa subsp. indica OX%3D39946) 2 - View
Coffea canephora Cc05_g08530 60S ribosomal protein L11 chr5 + View
Citrus clementina Ciclev10016875m.g scaffold_2 + View
Ceratophyllum demersum CDE10G0585 8 + View
Carya illinoinensis CiPaw.09G071700 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Chr09 + View
Carya illinoinensis CiPaw.03G192700 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Chr03 + View
Citrullus lanatus ClCG03G007540 60S ribosomal protein L11 CG_Chr03 - View
Citrullus lanatus ClCG07G002650 Ribosomal protein L11-like CG_Chr07 - View
Cucumis melo MELO3C002668.2 60S ribosomal protein L11 chr12 - View
Carica papaya Cpa.g.sc52.157 supercontig_52 - View
Chenopodium quinoa AUR62024048 RPL11A: 60S ribosomal protein L11-1 C_Quinoa_Scaffold_3389 - View
Chenopodium quinoa AUR62040437 RPL11A: 60S ribosomal protein L11-1 C_Quinoa_Scaffold_1279 - View
Capsella rubella Carub.0007s2251 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) scaffold_7 - View
Daucus carota DCAR_013278 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv11959 GWHABJS00000001 - View
Durio zibethinus Duzib192G0814 NW_019168037.1 + View
Durio zibethinus Duzib235G1546 NW_019167982.1 - View
Eucalyptus grandis Eucgr.D00478 Chr04 - View
Eucalyptus grandis Eucgr.A01929 Chr01 + View
Erythranthe guttata Migut.M00275 scaffold_13 + View
Fragaria x ananassa FAN11G0047 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb3-4 + View
Fragaria x ananassa FAN21G1492 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb3-2 - View
Fragaria x ananassa FAN14G2161 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb6-1 + View
Fragaria x ananassa FAN16G0546 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb3-3 - View
Fragaria x ananassa FAN02G3837 PTHR11994//PTHR11994:SF13 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb6-4 - View
Fragaria vesca FvH4_3g07450 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Fvb3 - View
Fragaria vesca FvH4_6g27670 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb6 - View
Gossypium hirsutum Gohir.D10G036300 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) D10 - View
Gossypium hirsutum Gohir.A10G035600 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) A10 - View
Glycine max Glyma.12G131600 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Gm12 - View
Gossypium raimondii Gorai.011G038200 Chr11 - View
Gossypium raimondii Gorai.010G160100 Chr10 + View
Lonicera japonica Lj8C100G12 GWHAAZE00000008 - View
Lonicera japonica Lj1A677T62 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_7_24281 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Lsat_1_v8_lg_7 + View
Lactuca sativa Lsat_1_v5_gn_4_48420 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Lsat_1_v8_lg_4 - View
Magnolia biondii MBI07_g09548_MAGBIO AED:0.02 Chr07 - View
Malus domestica MD09G1235900 Ribosomal L5P family protein Chr09 - View
Malus domestica MD17G1264500 Ribosomal L5P family protein Chr17 - View
Malus domestica MD05G1297100 ribosomal protein large subunit 16A Chr05 - View
Malus domestica MD10G1276900 ribosomal protein large subunit 16A Chr10 - View
Manihot esculenta Manes.16G041800 Chromosome16 + View
Manihot esculenta Manes.17G058100 Chromosome17 + View
Medicago truncatula Medtr4g080740 50S ribosomal protein L5P chr4 - View
Nelumbo nucifera Nn1g04500 chr1 + View
Nelumbo nucifera Nn3g21125 chr3 - View
Nicotiana tabacum Nitab4.5_0000249g0140 Ribosomal protein L5, Ribosomal protein L5 domain, Ribosomal protein L5, conserved site Nitab4.5_0000249 - View
Petunia axillaris Peaxi162Scf00384g00127 Unknown protein Peaxi162Scf00384 - View
Petunia axillaris Peaxi162Scf00469g00530 60S ribosomal protein L11-1 Peaxi162Scf00469 + View
Petunia axillaris Peaxi162Scf00229g01114 60S ribosomal protein L11-2 Peaxi162Scf00229 - View
Punica granatum PGR142G3242 NC_045128.1 - View
Punica granatum PGR042G1504 NC_045130.1 - View
Prunus persica Prupe.4G065200 Pp04 + View
Prunus persica Prupe.3G113800 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Pp03 - View
Populus trichocarpa Potri.011G068900 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Chr11 + View
Quercus lobata QL05p048349 5 + View
Quercus lobata QL08p042282 8 + View
Rosa chinensis RcHm_v2.0_Chr5g0011401 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim02G0145200 chr02 + View
Rhododendron simsii Rhsim06G0129900 chr06 - View
Rhododendron simsii Rhsim04G0075900 chr04 + View
Salvia bowleyana SalBow7G1038 GWHASIU00000005 + View
Salix brachista Sabra11G0049900 GWHAAZH00000011 + View
Simmondsia chinensis Sc12g0003650 GWHAASQ00000012 + View
Simmondsia chinensis Sc21g0004090 GWHAASQ00000021 - View
Sechium edule Sed0025716 LG05 - View
Sechium edule Sed0004754 LG04 - View
Solanum lycopersicum Solyc07g055230.4 60S ribosomal protein L11 (AHRD V3.3 *-* A0A2G2VRP4_CAPBA) SL4.0ch07 + View
Solanum lycopersicum Solyc12g010930.2 60S ribosomal protein L11 (AHRD V3.3 *-* A0A2G2VRP4_CAPBA) SL4.0ch12 + View
Solanum pennellii Sopen07g026990 encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment. | ribosomal protein large subunit 16A (RPL16A) | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic large ribosomal subunit, nucleolus, chloroplast, vacuole | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 , Ribosomal protein L5, conserved site , Ribosomal protein L5, N-terminal , Ribosomal protein L5, C-terminal | BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein Spenn-ch07 - View
Solanum tuberosum PGSC0003DMG400020434 Ribosomal protein L11 ST4.03ch07 + View
Solanum tuberosum PGSC0003DMG400007855 Ribosomal protein L11 ST4.03ch12 - View
Selenicereus undatus Hund00862 Scaffold_33678 - View
Trochodendron aralioides TAR627G0718 group6 + View
Trochodendron aralioides TAR624G0369 group9 + View
Trochodendron aralioides TAR629G0405 group0 + View
Theobroma cacao Thecc.06G167400 Chromosome_6 - View
Theobroma cacao Thecc.01G153400 Ribosomal L5P family protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104803021 60S ribosomal protein L11-1 NW_010960188.1 + View
Tripterygium wilfordii TWI59G0955 NC_052248.1 + View
Tripterygium wilfordii TWI23G0133 NC_052239.1 + View
Vaccinium macrocarpon vmacro09203 Similar to RPL11: 60S ribosomal protein L11 (Medicago sativa OX%3D3879) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro12386 Similar to RPL11A: 60S ribosomal protein L11-1 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01021244001 chr10 + View
Vitis vinifera GSVIVG01020743001 chr12 - View