Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG8G2610 | LG-8 | + | View | |
Actinidia chinensis | Actinidia18762 | Lachesis_group9 | + | View | |
Actinidia chinensis | Actinidia35254 | Lachesis_group2 | + | View | |
Arabidopsis lyrata | AL3G27880 | scaffold_3 | + | View | |
Avicennia marina | MSTRG.6840 | ScioBoG_102840_HRSCAF_103099 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.YA7R1N | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | arahy.Tifrunner.gnm1.Arahy.08 | - | View |
Arabidopsis thaliana | AT3G15380 | Plasma-membrane choline transporter family protein Encodes a member of a choline transporter-like protein family that facilitates choline transport%2C localizes to the trans-Golgi network%2C and during cytokinesis is associated with the phragmoplast. Loss-of-function results in an altered choline metabolite profile%2C defects in sieve plate and sieve pore formation and impaired phloem transport. Plasma-membrane choline transporter family protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603)%3B Has 948 Blast hits to 937 proteins in 182 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 503%3B Fungi - 120%3B Plants - 118%3B Viruses - 0%3B Other Eukaryotes - 207 (source: NCBI BLink). | Chr3 | + | View |
Brassica carinata | BcaB04g20929 | ChrB04 | - | View | |
Brassica carinata | BcaB06g29569 | ChrB06 | + | View | |
Brassica napus | C05p51790 | C05 | - | View | |
Brassica napus | A05p34020 | A05 | - | View | |
Brassica napus | A01p38720 | A01 | + | View | |
Brassica oleracea | BolC5t33865H | C5 | - | View | |
Brassica rapa | BraA05t22224Z | A05 | - | View | |
Brassica rapa | BraA03t13080Z | A03 | + | View | |
Brassica rapa | BraA01t03913Z | A01 | - | View | |
Capsicum annuum | CAN.G162.68 | PGAv.1.6.scaffold162 | + | View | |
Cannabis sativa | CANSAT56G0567 | NC_044371.1 | + | View | |
Cicer arietinum L. | Ca_01833_v3 | Ca_LG1_v3 | - | View | |
Coffea canephora | Cc05_g12200 | Putative CTL-like protein 1 | chr5 | + | View |
Citrus clementina | Ciclev10007637m.g | scaffold_1 | + | View | |
Carpinus fangiana | Cfa020557 | Cfa08 | - | View | |
Cardamine hirsuta | CARHR090420 | Choline transporter like family | Chr3 | + | View |
Carya illinoinensis | CiPaw.11G172300 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | Chr11 | + | View |
Citrullus lanatus | ClCG11G018140 | Choline transporter-related family protein | CG_Chr11 | + | View |
Cucumis melo | MELO3C016707.2 | Choline transporter-like protein 2 | chr07 | - | View |
Corchorus olitorius | COL.COLO4_09421 | Choline transporter-like protein | AWUE01014232.1 | + | View |
Capsella rubella | Carub.0003s1510 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | scaffold_3 | + | View |
Cucumis sativus L. | CsaV3_4G033780 | choline transporter-like protein 2 | chr4 | + | View |
Daucus carota | DCAR_019547 | hypothetical protein | DCARv2_Chr5 | - | View |
Davidia involucrata | Dinv04314 | GWHABJS00000001 | + | View | |
Erigeron canadensis | ECA236G2009 | Conyza_canadensis_scaffold:3 | - | View | |
Eucalyptus grandis | Eucgr.F01103 | Chr06 | - | View | |
Erythranthe guttata | Migut.M00849 | scaffold_13 | + | View | |
Eutrema salsugineum | Thhalv10020171m.g | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | scaffold_13 | - | View |
Fragaria x ananassa | FAN21G0641 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | Fvb3-2 | - | View |
Gossypium hirsutum | Gohir.D01G052400 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | D01 | + | View |
Gossypium hirsutum | Gohir.A01G065000 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | A01 | + | View |
Glycine max | Glyma.12G150800 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | Gm12 | - | View |
Glycine max | Glyma.06G246600 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | Gm06 | + | View |
Gossypium raimondii | Gorai.002G072200 | Chr02 | + | View | |
Helianthus annuus | HanXRQChr15g0494641 | Probable plasma-membrane choline transporter family protein | HanXRQChr15 | - | View |
Helianthus annuus | HanXRQChr11g0328451 | Putative choline transporter-like | HanXRQChr11 | + | View |
Lupinus albus | Lalb_Chr25g0286471 | PTHR12385//PTHR12385:SF47 - CTL TRANSPORTER // SUBFAMILY NOT NAMED | Lalb_Chr25 | + | View |
Lupinus albus | Lalb_Chr19g0134281 | PTHR12385//PTHR12385:SF47 - CTL TRANSPORTER // SUBFAMILY NOT NAMED | Lalb_Chr19 | + | View |
Lotus japonicus | Lj3g0021569 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | chr3 | - | View |
Lactuca sativa | Lsat_1_v5_gn_7_18881 | PTHR12385//PTHR12385:SF47 - CTL TRANSPORTER // SUBFAMILY NOT NAMED | Lsat_1_v8_lg_7 | - | View |
Malus domestica | MD11G1246200 | Plasma-membrane choline transporter family protein | Chr11 | + | View |
Malus domestica | MD03G1225500 | Plasma-membrane choline transporter family protein | Chr03 | - | View |
Manihot esculenta | Manes.03G112000 | Chromosome03 | - | View | |
Manihot esculenta | Manes.15G086100 | Chromosome15 | + | View | |
Punica granatum | PGR083G2041 | NC_045133.1 | - | View | |
Pisum sativum | Psat5g244680 | Plasma-membrane choline transporter | chr5LG3 | + | View |
Papaver somniferum | PSO541G1226 | NC_039363.1 | - | View | |
Populus trichocarpa | Potri.011G121100 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | Chr11 | + | View |
Phaseolus vulgaris | Phvul.011G150000 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | Chr11 | - | View |
Phaseolus vulgaris | Phvul.005G082401 | Chr05 | + | View | |
Quercus lobata | QL08p020494 | 8 | - | View | |
Rhododendron simsii | Rhsim04G0020100 | chr04 | - | View | |
Rhododendron simsii | Rhsim06G0197100 | chr06 | - | View | |
Striga asiatica | SGA_v2.0_scaffold73G24287 | scaffold73 | + | View | |
Striga asiatica | SGA_v2.0_scaffold34G13734 | scaffold34 | - | View | |
Salix brachista | Sabra11G0105100 | GWHAAZH00000011 | + | View | |
Simmondsia chinensis | Sc03g0009930 | GWHAASQ00000003 | + | View | |
Sechium edule | Sed0005873 | LG04 | + | View | |
Solanum lycopersicum | Solyc07g063230.3 | Choline transporter-like protein (AHRD V3.3 *** A0A1R3ICN0_COCAP) | SL4.0ch07 | + | View |
Schrenkiella parvula | Sp3g13630 | K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) | ch3-1 | + | View |
Solanum pennellii | Sopen07g031420 | Plasma-membrane choline transporter family protein | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 | Spenn-ch07 | + | View |
Solanum tuberosum | PGSC0003DMG400012423 | Conserved gene of unknown function | ST4.03ch07 | + | View |
Selenicereus undatus | Hund02220 | Scaffold_33678 | + | View | |
Trochodendron aralioides | TAR624G0482 | group9 | + | View | |
Trochodendron aralioides | TAR626G1858 | group3 | - | View | |
Theobroma cacao | Thecc.07G080500 | Plasma-membrane choline transporter family protein | Chromosome_7 | - | View |
Tarenaya hassleriana | THA.LOC104810480 | choline transporter-like protein 2 | NW_010965216.1 | + | View |
Tarenaya hassleriana | THA.LOC104818067 | choline transporter-like protein 2 isoform X1 | NW_010966021.1 | - | View |
Vaccinium macrocarpon | vmacro09540 | Similar to CHER1: Choline transporter protein 1 (Arabidopsis thaliana OX%3D3702) | chr6_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vaccinium macrocarpon | vmacro11852 | Similar to CHER1: Choline transporter protein 1 (Arabidopsis thaliana OX%3D3702) | chr11_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vitis vinifera | GSVIVG01014366001 | chr19 | + | View |