Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0049545 PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic isoform X1 [Vitis vinifera] Chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr8.2019 chr8 - View
Acer truncatum Atru.chr12.394 chr12 + View
Actinidia chinensis Actinidia02928 Lachesis_group22 + View
Actinidia chinensis Actinidia23672 Lachesis_group3 - View
Actinidia chinensis Actinidia11278 Lachesis_group21 - View
Actinidia chinensis Actinidia26489 Lachesis_group17 - View
Avicennia marina MSTRG.8269 ScioBoG_102841_HRSCAF_103114 - View
Amaranthus hybridus Ah.16g102550 AmaHy_arrow1_Scaffold_16 - View
Amaranthus hybridus Ah.10g036970 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (RA) (RuBisCO activase) AmaHy_arrow1_Scaffold_10 - View
Aquilegia oxysepala Aqoxy1G00872 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.S3V5ZL KOG0651 - 26S proteasome regulatory complex, ATPase RPT4 arahy.Tifrunner.gnm1.Arahy.07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.59KA91 KOG0651 - 26S proteasome regulatory complex, ATPase RPT4 arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NME7KH PTHR32429//PTHR32429:SF12//PTHR32429:SF8 - FAMILY NOT NAMED // RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.13 + View
Amborella trichopoda ATR0559G057 AmTr_v1.0_scaffold00012 - View
Cannabis sativa CANSAT35G0439 NC_044378.1 - View
Cicer arietinum L. Ca_08178_v3 Ca_LG3_v3 - View
Corylus avellana Haze_20837 Similar to RCA2: Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic (Larrea tridentata OX%3D66636) 10 - View
Corylus avellana Haze_24157 Similar to RCA1: Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic (Larrea tridentata OX%3D66636) 6 - View
Corylus avellana Haze_17109 Similar to RCA1: Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic (Larrea tridentata OX%3D66636) 11 - View
Coffea canephora Cc02_g07500 Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic chr2 + View
Citrus clementina Ciclev10031443m.g scaffold_4 + View
Citrus clementina Ciclev10013735m.g scaffold_6 - View
Ceratophyllum demersum CDE09G0450 7 + View
Carpinus fangiana Cfa011552 Cfa04 - View
Carya illinoinensis CiPaw.02G186000 PTHR32429//PTHR32429:SF12 - FAMILY NOT NAMED // RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC Chr02 - View
Carya illinoinensis CiPaw.10G147600 KOG0651 - 26S proteasome regulatory complex, ATPase RPT4 Chr10 - View
Carya illinoinensis CiPaw.09G197300 PF00004 - ATPase family associated with various cellular activities (AAA) (AAA) Chr09 - View
Citrullus lanatus ClCG11G006730 Ribulose bisphosphate carboxylase/oxygenase activase 1 CG_Chr11 + View
Citrullus lanatus ClCG02G019910 Ribulose bisphosphate carboxylase/oxygenase activase family protein CG_Chr02 + View
Citrullus lanatus ClCG07G003520 Ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 CG_Chr07 - View
Cucumis melo MELO3C008231.2 Ribulose bisphosphate carboxylase/oxygenase activase chr03 - View
Cucumis melo MELO3C025892.2 Ribulose bisphosphate carboxylase/oxygenase activase family protein chr11 - View
Carica papaya Cpa.g.sc81.100 supercontig_81 + View
Chenopodium quinoa AUR62012129 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic C_Quinoa_Scaffold_1995 - View
Chenopodium quinoa AUR62040707 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic C_Quinoa_Scaffold_1465 + View
Capsella rubella Carub.0004s2179 scaffold_4 - View
Cucumis sativus L. CsaV3_6G001300 Ribulose bisphosphate carboxylase/oxygenase activase chr6 - View
Cucumis sativus L. CsaV3_5G008270 Ribulose bisphosphate carboxylase/oxygenase activase chr5 - View
Cucumis sativus L. CsaV3_6G016610 Ribulose bisphosphate carboxylase/oxygenase activase chr6 + View
Daucus carota DCAR_012116 hypothetical protein DCARv2_Chr3 - View
Daucus carota DCAR_011723 hypothetical protein DCARv2_Chr3 - View
Daucus carota DCAR_005945 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv35568 GWHABJS00000015 + View
Davidia involucrata Dinv06759 GWHABJS00000004 - View
Durio zibethinus Duzib114G0514 NW_019167926.1 + View
Durio zibethinus Duzib106G1627 NW_019168492.1 + View
Durio zibethinus Duzib093G1516 NW_019167937.1 - View
Erigeron canadensis ECA232G4132 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA238G4726 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.B02310 Chr02 + View
Eucalyptus grandis Eucgr.K03065 Chr11 + View
Eucalyptus grandis Eucgr.J02030 Chr10 + View
Erythranthe guttata Migut.F00758 scaffold_6 + View
Fragaria x ananassa FAN10G3238 PTHR32429//PTHR32429:SF12 - FAMILY NOT NAMED // RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC Fvb7-1 + View
Fragaria x ananassa FAN02G3407 PTHR32429:SF12 - RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC Fvb6-4 - View
Fragaria x ananassa FAN14G3137 PTHR32429:SF12 - RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC Fvb6-1 - View
Fragaria x ananassa FAN05G3443 KOG0651 - 26S proteasome regulatory complex, ATPase RPT4 Fvb6-3 - View
Fragaria x ananassa FAN06G1654 PTHR32429:SF12 - RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC Fvb7-2 + View
Fragaria x ananassa FAN25G1728 KOG0651 - 26S proteasome regulatory complex, ATPase RPT4 Fvb3-1 + View
Fragaria x ananassa FAN06G3747 PTHR32429//PTHR32429:SF12 - FAMILY NOT NAMED // RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC Fvb7-2 - View
Fragaria x ananassa FAN21G0126 KOG0651 - 26S proteasome regulatory complex, ATPase RPT4 Fvb3-2 - View
Fragaria x ananassa FAN03G3441 PTHR32429//PTHR32429:SF12 - FAMILY NOT NAMED // RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC Fvb7-3 + View
Fragaria x ananassa FAN01G0222 KOG0651 - 26S proteasome regulatory complex, ATPase RPT4 Fvb7-4 + View
Fragaria vesca FvH4_6g13160 PTHR32429//PTHR32429:SF12//PTHR32429:SF8 - FAMILY NOT NAMED // RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC // SUBFAMILY NOT NAMED Fvb6 + View
Fragaria vesca FvH4_7g22910 PTHR32429:SF12 - RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC Fvb7 - View
Fragaria vesca FvH4_3g36920 KOG0651 - 26S proteasome regulatory complex, ATPase RPT4 Fvb3 - View
Gossypium hirsutum Gohir.A04G084300 PTHR32429//PTHR32429:SF12//PTHR32429:SF8 - FAMILY NOT NAMED // RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC // SUBFAMILY NOT NAMED A04 - View
Gossypium hirsutum Gohir.D04G123100 KOG0651 - 26S proteasome regulatory complex, ATPase RPT4 D04 - View
Gossypium hirsutum Gohir.A10G221700 KOG0651 - 26S proteasome regulatory complex, ATPase RPT4 A10 - View
Gossypium hirsutum Gohir.D10G234000 PTHR32429//PTHR32429:SF12 - FAMILY NOT NAMED // RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC D10 + View
Glycine max Glyma.03G068100 PTHR32429:SF12 - RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC Gm03 - View
Glycine max Glyma.18G036400 KOG0651 - 26S proteasome regulatory complex, ATPase RPT4 Gm18 + View
Glycine max Glyma.02G249600 PTHR32429:SF12 - RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC Gm02 - View
Glycine max Glyma.14G067000 PTHR32429:SF12 - RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC Gm14 + View
Glycine max Glyma.11G221000 KOG0651 - 26S proteasome regulatory complex, ATPase RPT4 Gm11 - View
Gossypium raimondii Gorai.012G106000 Chr12 - View
Gossypium raimondii Gorai.011G267600 Chr11 - View
Helianthus annuus HanXRQChr07g0201601 Probable ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic HanXRQChr07 + View
Lupinus albus Lalb_Chr10g0104701 PTHR32429//PTHR32429:SF12 - FAMILY NOT NAMED // RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC Lalb_Chr10 - View
Lupinus albus Lalb_Chr18g0053131 KOG0651 - 26S proteasome regulatory complex, ATPase RPT4 Lalb_Chr18 + View
Lupinus albus Lalb_Chr04g0251061 KOG0651 - 26S proteasome regulatory complex, ATPase RPT4 Lalb_Chr04 + View
Lotus japonicus LjContig00141g0007763 PTHR32429:SF12 - RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC Contig00141 + View
Lotus japonicus Lj3g0023398 PTHR32429:SF12 - RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC chr3 + View
Lotus japonicus Lj6g0024776 KOG0651 - 26S proteasome regulatory complex, ATPase RPT4 chr6 + View
Lonicera japonica Lj2A90T52 GWHAAZE00000002 + View
Lonicera japonica Lj8A80G67 GWHAAZE00000008 + View
Lactuca sativa Lsat_1_v5_gn_5_153800 PTHR32429:SF12 - RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC Lsat_1_v8_lg_5 + View
Magnolia biondii MBI14_g11607_MAGBIO AED:0.07 Chr14 - View
Magnolia biondii MBI05_g35194_MAGBIO AED:0.09 Chr05 - View
Malus domestica MD04G1134100 rubisco activase Chr04 - View
Malus domestica MD07G1202200 rubisco activase Chr07 - View
Malus domestica MD11G1095300 rubisco activase Chr11 + View
Malus domestica MD12G1147900 rubisco activase Chr12 - View
Malus domestica MD03G1086300 rubisco activase Chr03 + View
Malus domestica MD01G1137900 rubisco activase Chr01 - View
Manihot esculenta Manes.10G027600 Chromosome10 + View
Manihot esculenta Manes.09G095000 Chromosome09 - View
Medicago truncatula Medtr4g021210 ribulose bisphosphate carboxylase/oxygenase activase chr4 - View
Medicago truncatula Medtr3g068030 ribulose bisphosphate carboxylase/oxygenase activase chr3 - View
Nelumbo nucifera Nn2g13453 chr2 - View
Nelumbo nucifera Nn2g11205 chr2 - View
Olea europaea Oeu006880.1 scaffold1252 + View
Petunia axillaris Peaxi162Scf00094g00087 Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic Peaxi162Scf00094 + View
Petunia axillaris Peaxi162Scf00330g00810 Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic Peaxi162Scf00330 - View
Punica granatum PGR004G0502 NC_045131.1 + View
Punica granatum PGR044G2743 NC_045134.1 - View
Punica granatum PGR102G0238 NC_045129.1 - View
Prunus persica Prupe.6G070800 KOG0651 - 26S proteasome regulatory complex, ATPase RPT4 Pp06 + View
Prunus persica Prupe.2G238800 Pp02 - View
Prunus persica Prupe.6G260200 Pp06 - View
Papaver somniferum PSO513G0130 NW_020650859.1 + View
Populus trichocarpa Potri.010G200500 PTHR32429//PTHR32429:SF12 - FAMILY NOT NAMED // RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC Chr10 + View
Populus trichocarpa Potri.008G058500 PTHR32429//PTHR32429:SF12//PTHR32429:SF8 - FAMILY NOT NAMED // RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC // SUBFAMILY NOT NAMED Chr08 - View
Populus trichocarpa Potri.016G101100 PTHR32429//PTHR32429:SF12 - FAMILY NOT NAMED // RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC Chr16 - View
Phaseolus vulgaris Phvul.001G234300 Chr01 - View
Phaseolus vulgaris Phvul.010G016000 PTHR32429:SF12 - RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC Chr10 - View
Quercus lobata QL07p029234 7 + View
Quercus lobata QL07p029871 7 + View
Quercus lobata QL08p061117 8 - View
Rosa chinensis RcHm_v2.0_Chr3g0465651 RcHm_v2.0_Chr3 + View
Rosa chinensis RcHm_v2.0_Chr5g0066321 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim13G0077400 chr13 + View
Rhododendron simsii Rhsim05G0195600 chr05 - View
Salvia bowleyana SalBow6G2267 GWHASIU00000002 - View
Salvia bowleyana SalBow5G1262 GWHASIU00000003 + View
Salix brachista Sabra10G0154700 GWHAAZH00000010 + View
Salix brachista Sabra08G0043100 GWHAAZH00000008 - View
Simmondsia chinensis Sc10g0001790 GWHAASQ00000010 - View
Simmondsia chinensis Sc01g0004510 GWHAASQ00000001 - View
Sechium edule Sed0012461 LG11 + View
Sechium edule Sed0005767 LG05 - View
Sechium edule Sed0011863 LG04 - View
Solanum lycopersicum Solyc10g086580.2 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (AHRD V3.3 *** RCA_SOLPN) SL4.0ch10 - View
Solanum lycopersicum Solyc09g011080.3 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (AHRD V3.3 *** A0A2G2VP29_CAPBA) SL4.0ch09 - View
Solanum pennellii Sopen10g035980 Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplast precursor (RuBisCO activase 2) (RA 2) - Nicotiana tabacum (Common tobacco), Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco. | rubisco activase (RCA) | FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding | INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium | LOCATED IN: in 10 components | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core | BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein Spenn-ch10 - View
Solanum pennellii Sopen09g005830 Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplast precursor (RuBisCO activase 1) (RA 1) - Nicotiana tabacum (Common tobacco), Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco. | rubisco activase (RCA) | FUNCTIONS IN: enzyme regulator activity, ADP binding, ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity, ATP binding | INVOLVED IN: response to cold, response to light stimulus, defense response to bacterium | LOCATED IN: in 10 components | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core | BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400011072 Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic ST4.03ch10 + View
Solanum tuberosum PGSC0003DMG400019149 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic ST4.03ch10 + View
Selenicereus undatus Hund13790 Scaffold_33679 - View
Trochodendron aralioides TAR636G1380 group1 - View
Trochodendron aralioides TAR633G0542 group2 + View
Theobroma cacao Thecc.10G038500 Rubisco activase Chromosome_10 - View
Theobroma cacao Thecc.05G034400 Rubisco activase Chromosome_5 + View
Tarenaya hassleriana THA.LOC104816251 ribulose bisphosphate carboxylase/oxygenase activase%2C chloroplastic-like NW_010965775.1 + View
Tripterygium wilfordii TWI63G1677 NC_052240.1 - View
Tripterygium wilfordii TWI38G0277 NC_052252.1 - View
Tripterygium wilfordii TWI77G0089 NC_052236.1 - View
Vaccinium macrocarpon vmacro20182 Similar to RCA2: Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic (Larrea tridentata OX%3D66636) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro03031 Similar to Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic (Nicotiana tabacum OX%3D4097) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G2031 CM024070.1 - View
Vigna mungo VMungo0647G0186 CM024073.1 - View
Vanilla planifolia HPP92_018133 Ribulose bisphosphate carboxylase/oxygenase activase *** CM028158.1 + View
Vitis vinifera GSVIVG01034123001 chr8 - View
Vitis vinifera GSVIVG01024910001 chr6 - View