Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0040129 PREDICTED: uncharacterized protein LOC100259525 [Vitis vinifera] Chr14 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr7.2457 chr7 + View
Actinidia chinensis Actinidia15665 Lachesis_group27 - View
Actinidia chinensis Actinidia14594 Lachesis_group14 - View
Arabidopsis lyrata AL4G16700 scaffold_4 - View
Amaranthus hybridus Ah.16g104580 Ubiquitin carboxyl-terminal hydrolase 13 (EC 3.4.19.12) (Deubiquitinating enzyme 13) (AtUBP13) (Ubiquitin thioesterase 13) (Ubiquitin-specific-processing protease 13) AmaHy_arrow1_Scaffold_16 + View
Arabidopsis thaliana AT2G25320 TRAF-like family protein TRAF-like family protein%3B LOCATED IN: chloroplast%3B CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974)%2C MATH (InterPro:IPR002083)%3B BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT2G25330.1)%3B Has 73652 Blast hits to 40883 proteins in 2342 species: Archae - 900%3B Bacteria - 9328%3B Metazoa - 35691%3B Fungi - 5783%3B Plants - 4303%3B Viruses - 204%3B Other Eukaryotes - 17443 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaC07g40870 ChrC07 + View
Brassica napus A09p55690 A09 + View
Brassica napus C08p38690 C08 + View
Brassica oleracea BolC8t51439H C8 + View
Brassica rapa BraA09t40970Z A09 + View
Beta vulgaris EL10Ac2g04195 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Chr2_EL10_PGA_scaffold6 - View
Cicer arietinum L. Ca_15750_v3 Ca_LG5_v3 + View
Corylus avellana Haze_21497 Similar to UBP13: Ubiquitin carboxyl-terminal hydrolase 13 (Arabidopsis thaliana OX%3D3702) 3 - View
Coffea canephora Cc08_g00460 TRAF-like family protein chr8 - View
Citrus clementina Ciclev10007238m.g scaffold_1 - View
Ceratophyllum demersum CDE05G2189 3 + View
Cardamine hirsuta CARHR116200 TRAF-like family protein Chr4 - View
Carya illinoinensis CiPaw.08G010200 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Chr08 - View
Carya illinoinensis CiPaw.07G224800 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Chr07 + View
Citrullus lanatus ClCG05G016760 TRAF-like family protein LENGTH=1673 CG_Chr05 - View
Cucumis melo MELO3C003713.2 Ubiquitin carboxyl-terminal hydrolase 12 chr04 + View
Carica papaya Cpa.g.sc217.15 supercontig_217 + View
Chenopodium quinoa AUR62012417 UBP13: Ubiquitin carboxyl-terminal hydrolase 13 C_Quinoa_Scaffold_1995 + View
Chenopodium quinoa AUR62031541 UBP13: Ubiquitin carboxyl-terminal hydrolase 13 C_Quinoa_Scaffold_1206 + View
Capsella rubella Carub.0004s0499 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED scaffold_4 - View
Cucumis sativus L. CsaV3_3G046270 Ubiquitin carboxyl-terminal hydrolase chr3 - View
Davidia involucrata Dinv05003 GWHABJS00000017 - View
Davidia involucrata Dinv41471 GWHABJS00000013 - View
Davidia involucrata Dinv18205 GWHABJS00000003 + View
Durio zibethinus Duzib168G1956 NW_019168159.1 - View
Durio zibethinus Duzib187G1394 NW_019167860.1 + View
Erigeron canadensis ECA246G2127 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.C01723 Chr03 + View
Eutrema salsugineum Thhalv10000009m.g PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED scaffold_15 + View
Fragaria x ananassa FAN20G0291 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Fvb2-3 - View
Fragaria x ananassa FAN24G1139 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Fvb2-2 + View
Fragaria x ananassa FAN27G2849 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Fvb2-1 - View
Fragaria x ananassa FAN15G2120 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Fvb2-4 - View
Fragaria vesca FvH4_2g28850 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Fvb2 - View
Gossypium hirsutum Gohir.D05G057900 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED D05 + View
Gossypium hirsutum Gohir.D06G052600 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED D06 - View
Gossypium hirsutum Gohir.A06G053550 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED A06 - View
Glycine max Glyma.04G065500 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Gm04 - View
Gossypium raimondii Gorai.009G059000 Chr09 + View
Gossypium raimondii Gorai.010G061000 Chr10 - View
Lupinus albus Lalb_Chr11g0063671 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr11 - View
Lupinus albus Lalb_Chr23g0268451 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr23 - View
Lupinus albus Lalb_Chr08g0244181 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr08 + View
Lotus japonicus Lj1g0009523 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED chr1 + View
Lonicera japonica Lj7C724G9 GWHAAZE00000007 + View
Lactuca sativa Lsat_1_v5_gn_5_30121 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_5 - View
Malus domestica MD15G1127100 TRAF-like family protein Chr15 + View
Malus domestica MD08G1156500 TRAF-like family protein Chr08 + View
Manihot esculenta Manes.16G123500 Chromosome16 + View
Manihot esculenta Manes.03G013300 Chromosome03 - View
Medicago truncatula Medtr3g106700 CGS1 mRNA stability protein chr3 - View
Olea europaea Oeu053108.1 scaffold632 - View
Pisum sativum Psat5g029560 MATH domain chr5LG3 + View
Populus trichocarpa Potri.018G025600 KOG1003//KOG1987//KOG4603 - Actin filament-coating protein tropomyosin // Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains // TBP-1 interacting protein Chr18 - View
Populus trichocarpa Potri.006G256400 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Chr06 + View
Populus trichocarpa Potri.006G065300 PTHR24007//PTHR24007:SF9 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Chr06 - View
Phaseolus vulgaris Phvul.009G091900 PTHR24007//PTHR24007:SF6 - BRCA1-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Chr09 - View
Quercus lobata QL02p021300 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr6g0297611 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim02G0202500 chr02 + View
Striga asiatica SGA_v2.0_scaffold64G21955 scaffold64 + View
Salvia bowleyana SalBow4G0163 GWHASIU00000008 - View
Salix brachista Sabra18G0028200 GWHAAZH00000018 - View
Salix brachista Sabra06G0200600 GWHAAZH00000006 + View
Sechium edule Sed0015158 LG13 - View
Sapria himalayana SHI18538 scaffold28_7511268 - View
Trochodendron aralioides TAR383G0794 group10 - View
Trochodendron aralioides TAR636G2033 group1 - View
Trochodendron aralioides TAR625G0257 group4 - View
Theobroma cacao Thecc.09G133400 TRAF-like family protein Chromosome_9 + View
Theobroma cacao Thecc.09G022400 TRAF-like family protein Chromosome_9 - View
Trifolium pratense TPR.G3117 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI34G0528 NC_052235.1 - View
Tripterygium wilfordii TWI32G1054 NC_052254.1 + View
Vaccinium macrocarpon vmacro11183 Similar to At3g58210: MATH domain and coiled-coil domain-containing protein At3g58210 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G0140 CM024072.1 + View
Vitis vinifera GSVIVG01035878001 chr4 + View
Vitis vinifera GSVIVG01015601001 chr11 + View