Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0029920 Chaperonin CPN60-2, mitochondrial [Gossypium arboreum] Contig620 - View
CSS0000706 Heat shock protein 60 isoform 1 [Theobroma cacao] Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G10890 LG-8 - View
Acer truncatum Atru.chr4.1818 chr4 - View
Actinidia chinensis Actinidia30103 Lachesis_group24 + View
Actinidia chinensis Actinidia39945 Lachesis_group17 + View
Avicennia marina MSTRG.4199 ScioBoG_102837_HRSCAF_103074 + View
Amaranthus hybridus Ah.04g153380 AmaHy_arrow1_Scaffold_4 - View
Arabidopsis thaliana AT3G23990 heat shock protein 60 mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria. heat shock protein 60 (HSP60)%3B FUNCTIONS IN: copper ion binding%2C ATP binding%3B INVOLVED IN: response to cadmium ion%2C response to cyclopentenone%2C chaperone-mediated protein complex assembly%2C response to heat%2C mitochondrion organization%3B LOCATED IN: cytosol%2C cytosolic ribosome%2C mitochondrion%2C plasma membrane%2C mitochondrial matrix%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423)%2C Chaperonin Cpn60%2C conserved site (InterPro:IPR018370)%2C Chaperonin Cpn60 (InterPro:IPR001844)%3B BEST Arabidopsis thaliana protein match is: heat shock protein 60-2 (TAIR:AT2G33210.1)%3B Has 33706 Blast hits to 33652 proteins in 8680 species: Archae - 676%3B Bacteria - 21745%3B Metazoa - 1618%3B Fungi - 1515%3B Plants - 790%3B Viruses - 2%3B Other Eukaryotes - 7360 (source: NCBI BLink). Chr3 + View
Cannabis sativa CANSAT78G1698 NC_044376.1 - View
Corylus avellana Haze_24751 Similar to CPN60-2: Chaperonin CPN60-2, mitochondrial (Cucurbita maxima OX%3D3661) 8 + View
Corylus avellana Haze_11536 Similar to CPN60-2: Chaperonin CPN60-2, mitochondrial (Cucurbita maxima OX%3D3661) 9 + View
Cardamine hirsuta CARHR127210 60 kDa chaperonin Chr4 - View
Cucumis melo MELO3C023058.2 chaperonin CPN60-2, mitochondrial chr05 - View
Carica papaya Cpa.g.sc59.67 supercontig_59 + View
Carica papaya Cpa.g.sc8.201 supercontig_8 - View
Chenopodium quinoa AUR62035324 CPN60: Chaperonin CPN60, mitochondrial C_Quinoa_Scaffold_2909 - View
Capsella rubella Carub.0003s2453 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED scaffold_3 - View
Davidia involucrata Dinv38296 GWHABJS00000016 + View
Durio zibethinus Duzib138G1483 NW_019167893.1 + View
Erigeron canadensis ECA248G1845 Conyza_canadensis_scaffold:9 + View
Erythranthe guttata Migut.G00606 scaffold_7 + View
Erythranthe guttata Migut.D00503 scaffold_4 + View
Fragaria x ananassa FAN12G1740 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED Fvb4-3 + View
Fragaria x ananassa FAN07G0384 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED Fvb4-4 - View
Fragaria vesca FvH4_4g05420 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED Fvb4 + View
Gossypium hirsutum Gohir.D11G141400 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED D11 + View
Gossypium hirsutum Gohir.A09G201800 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED A09 + View
Gossypium hirsutum Gohir.D09G195700 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED D09 + View
Glycine max Glyma.20G079300 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED Gm20 - View
Gossypium raimondii Gorai.007G151700 Chr07 + View
Gossypium raimondii Gorai.006G219100 Chr06 + View
Helianthus annuus HanXRQChr02g0059441 Probable chaperonin CPN60-2, mitochondrial HanXRQChr02 + View
Lupinus albus Lalb_Chr03g0036801 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED Lalb_Chr03 - View
Lupinus albus Lalb_Chr19g0128631 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED Lalb_Chr19 + View
Lonicera japonica Lju414A1G21 GWHAAZE00000093 + View
Lactuca sativa Lsat_1_v5_gn_6_63121 Lsat_1_v8_lg_6 + View
Malus domestica MD10G1170700 heat shock protein 60 Chr10 - View
Malus domestica MD05G1182500 heat shock protein 60 Chr05 - View
Manihot esculenta Manes.03G155000 Chromosome03 - View
Olea europaea Oeu022323.1 scaffold199 + View
Petunia axillaris Peaxi162Scf00047g01633 60 kDa chaperonin 1 Peaxi162Scf00047 - View
Prunus persica Prupe.1G056300 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED Pp01 + View
Populus trichocarpa Potri.001G054400 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED Chr01 - View
Populus trichocarpa Potri.003G173900 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED Chr03 + View
Phaseolus vulgaris Phvul.007G238500 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED Chr07 - View
Quercus lobata QL06p022681 6 + View
Rosa chinensis RcHm_v2.0_Chr6g0285501 RcHm_v2.0_Chr6 - View
Striga asiatica SGA_v2.0_scaffold57G20165 scaffold57 - View
Salvia bowleyana SalBow2G0241 GWHASIU00000007 - View
Salix brachista Sabra01G0038900 GWHAAZH00000001 - View
Salix brachista Sabra03G0127400 GWHAAZH00000003 + View
Simmondsia chinensis Sc19g0005820 GWHAASQ00000019 + View
Sechium edule Sed0013920 LG04 - View
Solanum lycopersicum Solyc09g091180.3 60 kDa chaperonin (AHRD V3.3 *** Q8H903_ORYSJ) SL4.0ch09 + View
Solanum lycopersicum Solyc05g053470.3 60 kDa chaperonin (AHRD V3.3 *** Q8H903_ORYSJ) SL4.0ch05 + View
Solanum pennellii Sopen09g034150 Chaperonin CPN60-2, mitochondrial precursor (HSP60-2) - Cucurbita maxima (Pumpkin) (Winter squash), mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria. | heat shock protein 60 (HSP60) | FUNCTIONS IN: copper ion binding, ATP binding | INVOLVED IN: response to cadmium ion, response to cyclopentenone, chaperone-mediated protein complex assembly, response to heat, mitochondrion organization | LOCATED IN: cytosol, cytosolic ribosome, mitochondrion, plasma membrane, mitochondrial matrix | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 , Chaperonin Cpn60, conserved site , Chaperonin Cpn60 | BEST Arabidopsis thaliana protein match is: heat shock protein 60-2 Spenn-ch09 + View
Trochodendron aralioides TAR365G0603 group16 - View
Trochodendron aralioides TAR636G1961 group1 - View
Theobroma cacao Thecc.04G215300 Heat shock protein 60 Chromosome_4 - View
Theobroma cacao Thecc.01G232900 Heat shock protein 60 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104804823 chaperonin CPN60%2C mitochondrial NW_010972002.1 - View
Tripterygium wilfordii TWI09G1178 NC_052245.1 - View
Vaccinium macrocarpon vmacro15496 Similar to CPN60-2: Chaperonin CPN60-2, mitochondrial (Cucurbita maxima OX%3D3661) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro02731 Similar to CPN60-2: Chaperonin CPN60-2, mitochondrial (Cucurbita maxima OX%3D3661) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G1756 CM024071.1 - View
Vitis vinifera GSVIVG01029025001 chr5 + View