Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr1.4166 | chr1 | - | View | |
Actinidia chinensis | Actinidia25999 | Lachesis_group2 | + | View | |
Actinidia chinensis | Actinidia31145 | Lachesis_group9 | + | View | |
Arabidopsis lyrata | AL2G31870 | scaffold_2 | - | View | |
Arabidopsis thaliana | AT1G72200 | RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: LP.04 four leaves visible%2C 4 anthesis%2C petal differentiation and expansion stage%2C LP.08 eight leaves visible%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G22500.1)%3B Has 9343 Blast hits to 9316 proteins in 282 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 2295%3B Fungi - 806%3B Plants - 4899%3B Viruses - 51%3B Other Eukaryotes - 1288 (source: NCBI BLink). | Chr1 | - | View |
Cannabis sativa | CANSAT56G3524 | NC_044371.1 | - | View | |
Corylus avellana | Haze_16141 | Similar to ATL3: RING-H2 finger protein ATL3 (Arabidopsis thaliana OX%3D3702) | 11 | - | View |
Citrus clementina | Ciclev10026156m.g | scaffold_7 | - | View | |
Carpinus fangiana | Cfa003456 | Cfa01 | + | View | |
Cardamine hirsuta | CARHR065060 | RING finger protein | Chr2 | - | View |
Carya illinoinensis | CiPaw.02G130500 | PTHR14155:SF99 - RING-H2 FINGER PROTEIN ATL3 | Chr02 | + | View |
Cucumis melo | MELO3C022709.2 | RING-H2 finger protein ATL3-like | chr04 | - | View |
Corchorus olitorius | COL.COLO4_30876 | Zinc finger%2C RING-type | AWUE01020791.1 | - | View |
Erigeron canadensis | ECA234G3163 | Conyza_canadensis_scaffold:4 | + | View | |
Erigeron canadensis | ECA247G2021 | Conyza_canadensis_scaffold:7 | - | View | |
Erythranthe guttata | Migut.D00908 | scaffold_4 | + | View | |
Eutrema salsugineum | Thhalv10022171m.g | PTHR14155:SF145 - RING-H2 FINGER PROTEIN ATL61-RELATED | scaffold_13 | + | View |
Eutrema salsugineum | Thhalv10019648m.g | K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) | scaffold_9 | + | View |
Gossypium hirsutum | Gohir.D10G050850 | PTHR14155//PTHR14155:SF180 - RING FINGER DOMAIN-CONTAINING // RING/U-BOX DOMAIN-CONTAINING PROTEIN-RELATED | D10 | + | View |
Gossypium hirsutum | Gohir.A10G050274 | PTHR14155:SF175 - E3 UBIQUITIN-PROTEIN LIGASE RHA2B-RELATED | A10 | + | View |
Gossypium raimondii | Gorai.011G054600 | Chr11 | + | View | |
Helianthus annuus | HanXRQChr12g0360061 | Putative zinc finger, RING/FYVE/PHD-type | HanXRQChr12 | + | View |
Lactuca sativa | Lsat_1_v5_gn_1_39341 | Lsat_1_v8_lg_1 | - | View | |
Magnolia biondii | MBI19_g32877_MAGBIO | AED:0.00 | Chr19 | - | View |
Magnolia biondii | MBI13_g01651_MAGBIO | AED:0.04 | Chr13 | - | View |
Malus domestica | MD09G1172100 | RING/U-box superfamily protein | Chr09 | + | View |
Manihot esculenta | Manes.04G151500 | Chromosome04 | - | View | |
Manihot esculenta | Manes.11G011900 | Chromosome11 | + | View | |
Nelumbo nucifera | Nn6g35745 | chr6 | - | View | |
Olea europaea | Oeu019511.1 | chr18 | + | View | |
Prunus persica | Prupe.3G030500 | PTHR14155:SF99 - RING-H2 FINGER PROTEIN ATL3 | Pp03 | + | View |
Populus trichocarpa | Potri.003G073300 | PTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3 | Chr03 | - | View |
Populus trichocarpa | Potri.001G162000 | PTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3 | Chr01 | + | View |
Quercus lobata | QL05p000885 | 5 | - | View | |
Rhododendron simsii | Rhsim12G0213300 | chr12 | - | View | |
Striga asiatica | SGA_v2.0_scaffold122G33303 | scaffold122 | + | View | |
Salix brachista | Sabra01G0130500 | GWHAAZH00000001 | - | View | |
Salix brachista | Sabra03G0043900 | GWHAAZH00000003 | - | View | |
Sechium edule | Sed0010497 | LG04 | + | View | |
Solanum lycopersicum | Solyc06g063110.3 | RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LDD8_ARTAN) | SL4.0ch06 | - | View |
Solanum lycopersicum | Solyc03g123680.1 | RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LDD8_ARTAN) | SL4.0ch03 | - | View |
Schrenkiella parvula | Sp5g27290 | K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) | ch5-6 | - | View |
Solanum pennellii | Sopen06g022560 | RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein | Spenn-ch06 | - | View |
Solanum pennellii | Sopen03g041450 | RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein | Spenn-ch03 | - | View |
Solanum tuberosum | PGSC0003DMG400047336 | ACRE 132 | ST4.03ch03 | - | View |
Vaccinium macrocarpon | vmacro22012 | Similar to ATL3: RING-H2 finger protein ATL3 (Arabidopsis thaliana OX%3D3702) | scaffold00289_Vaccinium_macrocarpon_Stevens_v1 | + | View |