Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0043476 chlorophyll A/B binding protein, putative [Ricinus communis] Chr10 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr8.2228 chr8 - View
Acer truncatum Atru.chr12.21 chr12 - View
Actinidia chinensis Actinidia11596 Lachesis_group21 + View
Actinidia chinensis Actinidia29107 Lachesis_group3 + View
Actinidia chinensis Actinidia20729 Lachesis_group0 + View
Arabidopsis lyrata AL6G10520 scaffold_6 - View
Avicennia marina MSTRG.19016 ScioBoG_25048_HRSCAF_25167 + View
Aquilegia oxysepala Aqoxy2G00916 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CVJ130 PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED arahy.Tifrunner.gnm1.Arahy.02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6DQ39T PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED arahy.Tifrunner.gnm1.Arahy.12 - View
Arabidopsis thaliana AT2G40100 light harvesting complex photosystem II Lhcb4:3 protein (Lhcb4.3%2C light harvesting complex of photosystem II light harvesting complex photosystem II (LHCB4.3)%3B FUNCTIONS IN: chlorophyll binding%3B INVOLVED IN: response to blue light%2C response to red light%2C response to far red light%2C photosynthesis%3B LOCATED IN: light-harvesting complex%2C thylakoid%2C chloroplast thylakoid membrane%2C chloroplast%2C membrane%3B EXPRESSED IN: 28 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344)%3B BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT5G01530.1)%3B Has 2254 Blast hits to 2193 proteins in 216 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 3%3B Fungi - 0%3B Plants - 1937%3B Viruses - 0%3B Other Eukaryotes - 314 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT5G01530 light harvesting complex photosystem II light harvesting complex photosystem II (LHCB4.1)%3B FUNCTIONS IN: chlorophyll binding%3B INVOLVED IN: response to blue light%2C response to red light%2C response to far red light%2C photosynthesis%3B LOCATED IN: in 6 components%3B EXPRESSED IN: 27 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344)%3B BEST Arabidopsis thaliana protein match is: light harvesting complex photosystem II (TAIR:AT3G08940.2)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0618G419 AmTr_v1.0_scaffold00029 - View
Brassica carinata BcaC02g07352 ChrC02 + View
Brassica rapa BraA02t04683Z A02 - View
Cannabis sativa CANSAT35G0940 NC_044378.1 + View
Corylus avellana Haze_17216 Similar to LHCB4.3: Chlorophyll a-b binding protein CP29.3, chloroplastic (Arabidopsis thaliana OX%3D3702) 11 - View
Corylus avellana Haze_20995 Similar to LHCB4.2: Chlorophyll a-b binding protein CP29.2, chloroplastic (Arabidopsis thaliana OX%3D3702) 10 - View
Coffea canephora Cc06_g01460 Chlorophyll a-b binding protein CP29.2, chloroplastic chr6 + View
Citrus clementina Ciclev10012370m.g scaffold_6 - View
Citrus clementina Ciclev10032377m.g scaffold_4 - View
Ceratophyllum demersum CDE04G1487 2 + View
Carpinus fangiana Cfa001328 Cfa01 + View
Carpinus fangiana Cfa017214 Cfa07 + View
Cardamine hirsuta CARHR211890 Chlorophyll a-b binding protein 6, chloroplastic Chr6 + View
Cardamine hirsuta CARHR135070 Chlorophyll a-b binding protein 6, chloroplastic Chr4 + View
Carya illinoinensis CiPaw.09G208700 PTHR21649//PTHR21649:SF6 - CHLOROPHYLL A/B BINDING PROTEIN // CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED Chr09 - View
Carya illinoinensis CiPaw.01G297600 PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC Chr01 - View
Citrullus lanatus ClCG10G022080 Chlorophyll a-b binding protein 6, chloroplastic CG_Chr10 - View
Citrullus lanatus ClCG04G007140 Chlorophyll a-b binding protein C, chloroplastic CG_Chr04 - View
Corchorus olitorius COL.COLO4_14545 Chlorophyll A-B binding protein%2C plant AWUE01015434.1 + View
Carica papaya Cpa.g.sc163.22 supercontig_163 - View
Carica papaya Cpa.g.sc19.185 supercontig_19 + View
Capsella rubella Carub.0004s2227 PTHR21649//PTHR21649:SF32 - CHLOROPHYLL A/B BINDING PROTEIN // CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC scaffold_4 + View
Cucumis sativus L. CsaV3_4G026100 Chlorophyll a-b binding protein, chloroplastic chr4 + View
Daucus carota DCAR_028844 hypothetical protein DCARv2_Chr8 + View
Durio zibethinus Duzib106G1849 NW_019168492.1 - View
Durio zibethinus Duzib114G0691 NW_019167926.1 + View
Erigeron canadensis ECA247G0325 Conyza_canadensis_scaffold:7 + View
Erythranthe guttata Migut.L02008 scaffold_12 - View
Eutrema salsugineum Thhalv10017060m.g PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC scaffold_10 + View
Eutrema salsugineum Thhalv10021263m.g K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) scaffold_13 + View
Fragaria x ananassa FAN14G2107 K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) Fvb6-1 - View
Fragaria x ananassa FAN01G0634 PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC Fvb7-4 + View
Fragaria x ananassa FAN09G2037 K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) Fvb6-2 - View
Fragaria x ananassa FAN10G1131 PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC Fvb7-1 - View
Fragaria x ananassa FAN06G4602 PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC Fvb7-2 + View
Fragaria x ananassa FAN02G4444 K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) Fvb6-4 + View
Fragaria x ananassa FAN05G3715 PF00504//PF00717//PF03226 - Chlorophyll A-B binding protein (Chloroa_b-bind) // Peptidase S24-like (Peptidase_S24) // Yippee zinc-binding/DNA-binding /Mis18, centromere assembly (Yippee-Mis18) Fvb6-3 + View
Fragaria x ananassa FAN14G2573 K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) Fvb6-1 - View
Fragaria vesca FvH4_7g24350 PTHR21649//PTHR21649:SF32 - CHLOROPHYLL A/B BINDING PROTEIN // CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC Fvb7 - View
Fragaria vesca FvH4_6g11540 PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED Fvb6 + View
Gossypium hirsutum Gohir.A01G227800 PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED A01 + View
Gossypium hirsutum Gohir.A10G235100 K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) A10 - View
Gossypium hirsutum Gohir.D01G217600 PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED D01 + View
Glycine max Glyma.03G060300 PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED Gm03 + View
Glycine max Glyma.18G028400 PTHR21649//PTHR21649:SF32 - CHLOROPHYLL A/B BINDING PROTEIN // CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC Gm18 + View
Glycine max Glyma.01G115900 PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED Gm01 - View
Gossypium raimondii Gorai.002G263900 Chr02 + View
Gossypium raimondii Gorai.011G285900 Chr11 - View
Helianthus annuus HanXRQChr01g0005951 Putative chlorophyll A-B binding protein; Chlorophyll a/b binding protein domain HanXRQChr01 + View
Hydrangea macrophylla Hma1.2p1_0362F.1_g136150 Hma1.2p1_0362F.1 - View
Lupinus albus Lalb_Chr07g0193531 PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED Lalb_Chr07 + View
Lotus japonicus Lj3g0024765 PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED chr3 - View
Lonicera japonica Lj2A76T79 GWHAAZE00000002 + View
Malus domestica MD07G1220500 light harvesting complex photosystem II Chr07 - View
Malus domestica MD01G1132800 light harvesting complex photosystem II Chr01 - View
Malus domestica MD12G1165400 light harvesting complex photosystem II Chr12 - View
Malus domestica MD04G1151300 light harvesting complex photosystem II Chr04 - View
Manihot esculenta Manes.07G128500 Chromosome07 - View
Manihot esculenta Manes.08G091700 Chromosome08 - View
Medicago truncatula Medtr3g070340 light-harvesting complex I chlorophyll A/B-binding protein chr3 - View
Nelumbo nucifera Nn2g13690 chr2 - View
Nelumbo nucifera Nn2g11466 chr2 - View
Olea europaea Oeu015026.1 chr17 - View
Petunia axillaris Peaxi162Scf00825g00003 Chlorophyll a-b binding protein 25, chloroplastic Peaxi162Scf00825 - View
Petunia axillaris Peaxi162Scf00141g00022 Chlorophyll a-b binding protein 6, chloroplastic Peaxi162Scf00141 + View
Punica granatum PGR004G0948 NC_045131.1 + View
Prunus persica Prupe.2G248900 PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC Pp02 - View
Prunus persica Prupe.6G276200 PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED Pp06 - View
Papaver somniferum PSO339G3254 NC_039366.1 + View
Papaver somniferum PSO801G0562 NW_020628818.1 + View
Populus trichocarpa Potri.006G099500 K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) Chr06 - View
Populus trichocarpa Potri.016G115200 K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) Chr16 - View
Populus trichocarpa Potri.008G067300 PTHR21649//PTHR21649:SF32 - CHLOROPHYLL A/B BINDING PROTEIN // CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC Chr08 - View
Phaseolus vulgaris Phvul.010G002100 PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED Chr10 + View
Phaseolus vulgaris Phvul.001G242100 PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC Chr01 - View
Quercus lobata QL07p035805 7 + View
Rosa chinensis RcHm_v2.0_Chr3g0463241 RcHm_v2.0_Chr3 + View
Rosa chinensis RcHm_v2.0_Chr1g0370011 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim05G0212900 chr05 - View
Salix brachista Sabra06G0076400 GWHAAZH00000006 - View
Salix brachista Sabra16G0111100 GWHAAZH00000016 - View
Salix brachista Sabra08G0049400 GWHAAZH00000008 - View
Schrenkiella parvula Sp4g22410 PTHR21649:SF32 - CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC ch4-6 + View
Schrenkiella parvula Sp6g40810 K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) ch6-6 + View
Solanum tuberosum PGSC0003DMG400008488 Chloroplast pigment-binding protein CP29 ST4.03ch09 + View
Trochodendron aralioides TAR369G0321 group18 + View
Theobroma cacao Thecc.05G017200 Light-harvesting complex II protein Lhcb4 Chromosome_5 + View
Theobroma cacao Thecc.10G020400 Light-harvesting complex II protein Lhcb8 Chromosome_10 + View
Tripterygium wilfordii TWI74G1252 NC_052234.1 + View
Utricularia gibba unitig_26.g9092 unitig_26 + View
Vaccinium macrocarpon vmacro20256 Similar to LHCB4.2: Chlorophyll a-b binding protein CP29.2, chloroplastic (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G0218 CM024070.1 - View
Vigna mungo VMungo0331G1932 CM024078.1 + View