Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0008015 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Solanum lycopersicum] Contig440 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G2010 LG-8 - View
Acer truncatum Atru.chr2.1941 chr2 + View
Arabidopsis lyrata AL3G27110 scaffold_3 - View
Brassica napus A01p39030 A01 + View
Brassica napus C01p49650 C01 + View
Brassica oleracea BolC1t04921H C1 + View
Brassica rapa BraA01t03950Z A01 + View
Cannabis sativa CANSAT56G0339 NC_044371.1 - View
Coffea canephora Cc05_g09240 Putative AC transposase chr5 + View
Coffea canephora Cc05_g10690 Putative AC transposase chr5 - View
Cardamine hirsuta CARHR089740 HAT family dimerization domain-containing protein Chr3 - View
Carya illinoinensis CiPaw.11G156100 PTHR23272//PTHR23272:SF13 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Chr11 + View
Citrullus lanatus ClCG09G022320 HAT family dimerisation domain containing protein, expressed CG_Chr09 + View
Cucumis melo MELO3C031104.2 zinc finger BED domain-containing protein RICESLEEPER 1-like isoform X1 chr05 - View
Chenopodium quinoa AUR62013958 Os05g0239150: Zinc finger BED domain-containing protein RICESLEEPER 1 C_Quinoa_Scaffold_3035 - View
Cucumis sativus L. CsaV3_6G037990 Zinc finger BED domain-containing protein chr6 + View
Durio zibethinus Duzib213G0128 NW_019167993.1 + View
Erythranthe guttata Migut.H02025 scaffold_8 + View
Eutrema salsugineum Thhalv10020233m.g PTHR23272//PTHR23272:SF13 - BED FINGER-RELATED // SUBFAMILY NOT NAMED scaffold_13 + View
Fragaria vesca FvH4_3g17721 PTHR23272//PTHR23272:SF13 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Fvb3 - View
Gossypium hirsutum Gohir.D11G302903 PTHR23272//PTHR23272:SF13 - BED FINGER-RELATED // SUBFAMILY NOT NAMED D11 + View
Gossypium hirsutum Gohir.A11G289741 PTHR23272//PTHR23272:SF13 - BED FINGER-RELATED // SUBFAMILY NOT NAMED A11 - View
Glycine max Glyma.18G105600 PTHR23272//PTHR23272:SF31 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Gm18 + View
Gossypium raimondii Gorai.007G331900 Chr07 + View
Hydrangea macrophylla Hma1.2p1_0050F.1_g028760 Hma1.2p1_0050F.1 - View
Lupinus albus Lalb_Chr10g0106771 PTHR23272//PTHR23272:SF31 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Lalb_Chr10 - View
Lonicera japonica Lj1P824T53 GWHAAZE00000001 - View
Malus domestica MD11G1270200 BED zinc finger Chr11 + View
Malus domestica MD09G1155300 BED zinc finger Chr09 - View
Nelumbo nucifera Nn3g20984 chr3 - View
Nelumbo nucifera Nn6g34411 chr6 - View
Olea europaea Oeu010033.1 chr6 + View
Punica granatum PGR083G0919 NC_045133.1 + View
Prunus persica Prupe.3G170500 PTHR23272//PTHR23272:SF31 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Pp03 + View
Prunus persica Prupe.4G156200 PTHR23272//PTHR23272:SF13 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Pp04 - View
Populus trichocarpa Potri.011G104000 PTHR23272//PTHR23272:SF13 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Chr11 - View
Populus trichocarpa Potri.001G383800 PTHR23272//PTHR23272:SF13 - BED FINGER-RELATED // SUBFAMILY NOT NAMED Chr01 - View
Rhododendron simsii Rhsim06G0212000 chr06 + View
Rhododendron simsii Rhsim06G0120900 chr06 - View
Striga asiatica SGA_v2.0_scaffold130G34269 scaffold130 - View
Salix brachista Sabra11G0076800 GWHAAZH00000011 + View
Salix brachista Sabra11G0081700 GWHAAZH00000011 + View
Salix brachista Sabra16G0252800 GWHAAZH00000016 - View
Sechium edule Sed0011120 LG04 + View
Sapria himalayana SHI03635 scaffold5_19632047 + View
Schrenkiella parvula Sp3g13020 PTHR23272//PTHR23272:SF13 - BED FINGER-RELATED // SUBFAMILY NOT NAMED ch3-1 - View
Solanum pennellii Sopen07g015380 Putative AC transposase (ORFA) - Zea mays (Maize), transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. | BED zinc finger , hAT family dimerisation domain | CONTAINS InterPro DOMAIN/s: HAT dimerisation , Zinc finger, BED-type predicted | BEST Arabidopsis thaliana protein match is: BED zinc finger , hAT family dimerisation domain Spenn-ch07 + View
Selenicereus undatus Hund10410 Scaffold_10417 - View
Theobroma cacao Thecc.07G134000 BED zinc finger Chromosome_7 + View
Theobroma cacao Thecc.01G160100 BED zinc finger Chromosome_1 + View
Tripterygium wilfordii TWI18G0917 NC_052241.1 - View
Tripterygium wilfordii TWI38G0584 NC_052252.1 + View
Tripterygium wilfordii TWI39G1020 NC_052250.1 - View
Vitis vinifera GSVIVG01014094001 chr19 - View