Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0005315 PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Vitis vinifera] Contig1181 - View
CSS0014931 hypothetical protein JCGZ_02373 [Jatropha curcas] Chr5 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr5.1807 chr5 - View
Actinidia chinensis Actinidia11361 Lachesis_group21 + View
Actinidia chinensis Actinidia30136 Lachesis_group24 - View
Actinidia chinensis Actinidia39918 Lachesis_group17 + View
Actinidia chinensis Actinidia37542 Lachesis_group13 - View
Aquilegia oxysepala Aqoxy2G03722 CHR02 - View
Aquilegia oxysepala Aqoxy5G00169 CHR05 - View
Arabidopsis thaliana AT4G14300 RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G33410.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Amborella trichopoda ATR0736G022 AmTr_v1.0_scaffold00067 + View
Beta vulgaris EL10Ac3g04958 PTHR24012:SF308 - PROTEIN Y55F3AM.3, ISOFORM A Chr3_EL10_PGA_scaffold7 - View
Cannabis sativa CANSAT01G2671 NC_044373.1 + View
Corylus avellana Haze_11443 Similar to RNP1: Heterogeneous nuclear ribonucleoprotein 1 (Arabidopsis thaliana OX%3D3702) 9 - View
Corylus avellana Haze_24680 Similar to RNP1: Heterogeneous nuclear ribonucleoprotein 1 (Arabidopsis thaliana OX%3D3702) 8 - View
Coffea canephora Cc01_g17960 Putative uncharacterized protein chr1 + View
Coffea canephora Cc03_g05990 RNA-binding (RRM/RBD/RNP motifs) family protein chr3 - View
Citrus clementina Ciclev10020365m.g scaffold_3 + View
Carpinus fangiana Cfa002469 Cfa01 - View
Cardamine hirsuta CARHR220480 RNA-binding protein-like Chr7 + View
Carya illinoinensis CiPaw.03G268700 K14411 - RNA-binding protein Musashi (MSI) Chr03 - View
Carya illinoinensis CiPaw.02G108200 K14411 - RNA-binding protein Musashi (MSI) Chr02 + View
Carya illinoinensis CiPaw.04G188900 K14411 - RNA-binding protein Musashi (MSI) Chr04 - View
Carya illinoinensis CiPaw.01G179600 K14411 - RNA-binding protein Musashi (MSI) Chr01 + View
Citrullus lanatus ClCG07G001290 RNA-binding protein-like CG_Chr07 - View
Cucumis melo MELO3C012850.2 heterogeneous nuclear ribonucleoprotein 1-like chr04 + View
Cucumis melo MELO3C023033.2 heterogeneous nuclear ribonucleoprotein 1-like chr05 - View
Carica papaya Cpa.g.sc165.46 supercontig_165 - View
Chenopodium quinoa AUR62002178 RNP1: Heterogeneous nuclear ribonucleoprotein 1 C_Quinoa_Scaffold_4480 - View
Capsella rubella Carub.0007s2801 PTHR24012//PTHR24012:SF308 - FAMILY NOT NAMED // PROTEIN Y55F3AM.3, ISOFORM A scaffold_7 - View
Cucumis sativus L. CsaV3_2G012530 heterogeneous nuclear ribonucleoprotein 1-like chr2 + View
Cucumis sativus L. CsaV3_3G028220 heterogeneous nuclear ribonucleoprotein 1-like chr3 - View
Davidia involucrata Dinv16384 GWHABJS00000007 - View
Davidia involucrata Dinv29818 GWHABJS00000016 + View
Davidia involucrata Dinv27094 GWHABJS00000014 + View
Erigeron canadensis ECA247G1281 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA236G0472 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.H00136 Chr08 + View
Erythranthe guttata Migut.G00490 scaffold_7 + View
Fragaria x ananassa FAN27G1061 K14411 - RNA-binding protein Musashi (MSI) Fvb2-1 + View
Fragaria x ananassa FAN15G1588 K14411 - RNA-binding protein Musashi (MSI) Fvb2-4 + View
Fragaria x ananassa FAN24G1103 K14411 - RNA-binding protein Musashi (MSI) Fvb2-2 - View
Fragaria x ananassa FAN20G1069 K14411 - RNA-binding protein Musashi (MSI) Fvb2-3 - View
Fragaria x ananassa FAN17G1612 K14411 - RNA-binding protein Musashi (MSI) Fvb4-2 + View
Fragaria vesca FvH4_2g20810 K14411 - RNA-binding protein Musashi (MSI) Fvb2 + View
Gossypium hirsutum Gohir.A08G049200 PTHR24012:SF318 - RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN A08 + View
Gossypium hirsutum Gohir.A02G041800 PTHR24012//PTHR24012:SF308 - FAMILY NOT NAMED // PROTEIN Y55F3AM.3, ISOFORM A A02 + View
Gossypium hirsutum Gohir.D08G059200 PTHR24012:SF318 - RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN D08 + View
Gossypium hirsutum Gohir.D02G047500 PTHR24012//PTHR24012:SF308 - FAMILY NOT NAMED // PROTEIN Y55F3AM.3, ISOFORM A D02 + View
Gossypium raimondii Gorai.005G052700 Chr05 + View
Gossypium raimondii Gorai.004G061200 Chr04 + View
Lupinus albus Lalb_Chr06g0169461 PTHR24012//PTHR24012:SF308 - FAMILY NOT NAMED // PROTEIN Y55F3AM.3, ISOFORM A Lalb_Chr06 - View
Lupinus albus Lalb_Chr21g0312451 PTHR24012//PTHR24012:SF308 - FAMILY NOT NAMED // PROTEIN Y55F3AM.3, ISOFORM A Lalb_Chr21 - View
Lotus japonicus Lj5g0003393 PTHR24012//PTHR24012:SF308 - FAMILY NOT NAMED // PROTEIN Y55F3AM.3, ISOFORM A chr5 + View
Lonicera japonica Lj2A1144T88 GWHAAZE00000002 + View
Lonicera japonica Lj6A623T39 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_9_10141 Lsat_1_v8_lg_9 - View
Malus domestica MD13G1219200 RNA-binding (RRM/RBD/RNP motifs) family protein Chr13 - View
Malus domestica MD16G1224500 RNA-binding (RRM/RBD/RNP motifs) family protein Chr16 - View
Malus domestica MD05G1191700 RNA-binding (RRM/RBD/RNP motifs) family protein Chr05 - View
Manihot esculenta Manes.15G044100 Chromosome15 - View
Manihot esculenta Manes.03G160600 Chromosome03 + View
Manihot esculenta Manes.13G037800 Chromosome13 - View
Nelumbo nucifera Nn3g19745 chr3 - View
Nicotiana tabacum Nitab4.5_0003295g0160 RNA recognition motif domain, Nucleotide-binding, alpha-beta plait Nitab4.5_0003295 - View
Petunia axillaris Peaxi162Scf00415g00526 RNA-binding (RRM/RBD/RNP motifs) family protein Peaxi162Scf00415 - View
Punica granatum PGR031G2067 NC_045127.1 - View
Prunus persica Prupe.1G045900 Pp01 - View
Prunus persica Prupe.8G218100 K14411 - RNA-binding protein Musashi (MSI) Pp08 + View
Populus trichocarpa Potri.008G170400 PTHR24012//PTHR24012:SF308 - FAMILY NOT NAMED // PROTEIN Y55F3AM.3, ISOFORM A Chr08 - View
Populus trichocarpa Potri.010G067500 PTHR24012//PTHR24012:SF308 - FAMILY NOT NAMED // PROTEIN Y55F3AM.3, ISOFORM A Chr10 + View
Populus trichocarpa Potri.002G258600 K14411 - RNA-binding protein Musashi (MSI) Chr02 + View
Quercus lobata QL09p040974 9 - View
Quercus lobata QL06p020678 6 - View
Rosa chinensis RcHm_v2.0_Chr6g0287221 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim13G0039100 chr13 - View
Striga asiatica SGA_v2.0_scaffold67G22707 scaffold67 + View
Salvia bowleyana SalBow6G0309 GWHASIU00000002 + View
Salix brachista Sabra10G0039400 GWHAAZH00000010 - View
Salix brachista Sabra08G0130300 GWHAAZH00000008 - View
Salix brachista Sabra02G0196800 GWHAAZH00000002 + View
Simmondsia chinensis Sc25g0003610 GWHAASQ00000025 + View
Sechium edule Sed0020816 LG04 - View
Sechium edule Sed0012588 LG09 + View
Sechium edule Sed0002121 LG01 + View
Schrenkiella parvula Sp7g12310 PTHR24012:SF308 - PROTEIN Y55F3AM.3, ISOFORM A ch7-4 + View
Solanum pennellii Sopen09g028570 RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein ., 28 kDa ribonucleoprotein, chloroplast precursor (28RNP) - Nicotiana sylvestris (Wood tobacco) Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400003821 RNA-binding protein ST4.03ch09 - View
Selenicereus undatus Hund03076 Scaffold_19641 - View
Selenicereus undatus Hund05473 Scaffold_19641 + View
Trochodendron aralioides TAR365G0858 group16 + View
Trochodendron aralioides TAR362G0502 group17 - View
Trochodendron aralioides TAR633G0795 group2 + View
Trochodendron aralioides TAR636G1154 group1 + View
Theobroma cacao Thecc.04G261600 RNA-binding family protein Chromosome_4 - View
Tripterygium wilfordii TWI53G1794 NC_052244.1 + View
Vaccinium macrocarpon vmacro15469 Similar to RNP1: Heterogeneous nuclear ribonucleoprotein 1 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro08537 Similar to RNP1: Heterogeneous nuclear ribonucleoprotein 1 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro02702 Similar to RNP1: Heterogeneous nuclear ribonucleoprotein 1 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vanilla planifolia HPP92_008543 RNA-binding protein-like *-* CM028153.1 + View
Vitis vinifera GSVIVG01028394001 chr7 - View
Vitis vinifera GSVIVG01027891001 chr5 - View