Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0010016 PREDICTED: zinc finger protein NUTCRACKER-like isoform X1 [Nelumbo nucifera] Chr2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G1000 LG-8 + View
Aethionema arabicum Aa31LG10G890 LG-10 - View
Acer truncatum Atru.chr1.3736 chr1 + View
Actinidia chinensis Actinidia21767 Lachesis_group1 + View
Actinidia chinensis Actinidia32152 Lachesis_group27 - View
Arabidopsis lyrata AL3G25950 scaffold_3 + View
Arabidopsis lyrata AL1G63110 scaffold_1 - View
Avicennia marina MSTRG.22576 ScioBoG_3703_HRSCAF_3719 + View
Avicennia marina MSTRG.9499 ScioBoG_12795_HRSCAF_12848 - View
Avicennia marina MSTRG.10979 ScioBoG_14204_HRSCAF_14270 + View
Amaranthus hybridus Ah.08g216310 Protein indeterminate-domain 7 AmaHy_arrow1_Scaffold_8 - View
Amaranthus hybridus Ah.10g034260 Zinc finger protein MAGPIE (Protein POLLEN SPECIFIC GENE 3) (Protein indeterminate-domain 3) (AtIDD3) AmaHy_arrow1_Scaffold_10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.951CXV PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8W2D3B PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.18 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IMP9EL PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT3G13810 indeterminate(ID)-domain 11 indeterminate(ID)-domain 11 (IDD11)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%3B BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 7 (TAIR:AT1G55110.1)%3B Has 54110 Blast hits to 21919 proteins in 332 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 48498%3B Fungi - 430%3B Plants - 766%3B Viruses - 2%3B Other Eukaryotes - 4406 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC05g29154 ChrC05 - View
Brassica carinata BcaB04g18800 ChrB04 + View
Brassica carinata BcaB06g25432 ChrB06 - View
Brassica carinata BcaC01g03973 ChrC01 - View
Brassica napus A03p38430 A03 + View
Brassica napus C05p53960 C05 - View
Brassica napus C03p46610 C03 + View
Brassica oleracea BolC3t16924H C3 + View
Brassica oleracea BolC5t34062H C5 - View
Brassica oleracea BolC3t21540H C3 - View
Brassica rapa BraA01t02577Z A01 + View
Brassica rapa BraA03t12995Z A03 + View
Beta vulgaris EL10Ac7g16348 PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr7_EL10_PGA_scaffold5 - View
Capsicum annuum CAN.G825.38 PGAv.1.6.scaffold825 - View
Capsicum annuum CAN.G1389.28 PGAv.1.6.scaffold1389 - View
Cannabis sativa CANSAT25G2038 NC_044370.1 + View
Cannabis sativa CANSAT56G3526 NC_044371.1 - View
Cicer arietinum L. Ca_23325_v3 Ca_LG7_v3 - View
Corylus avellana Haze_18170 Similar to GAF1: Zinc finger protein GAI-ASSOCIATED FACTOR 1 (Arabidopsis thaliana OX%3D3702) 7 - View
Corylus avellana Haze_15962 Similar to IDD7: Protein indeterminate-domain 7 (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc04_g01870 Putative indeterminate(ID)-domain 7 chr4 + View
Citrus clementina Ciclev10007837m.g scaffold_1 - View
Citrus clementina Ciclev10025122m.g scaffold_7 + View
Carpinus fangiana Cfa003577 Cfa01 + View
Cardamine hirsuta CARHR044700 Zinc finger protein, putative Chr1 - View
Cardamine hirsuta CARHR088580 Zinc finger protein, putative Chr3 + View
Carya illinoinensis CiPaw.02G139500 PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr02 + View
Carya illinoinensis CiPaw.01G224200 PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr01 + View
Citrullus lanatus ClCG05G017910 Zinc finger protein CG_Chr05 - View
Citrullus lanatus ClCG07G013780 indeterminate(ID)-domain 7 LENGTH=455 CG_Chr07 - View
Citrullus lanatus ClCG09G000740 Zinc finger protein CG_Chr09 - View
Cucumis melo MELO3C024385.2 protein indeterminate-domain 7 chr01 + View
Cucumis melo MELO3C016876.2 Zinc finger family protein chr07 + View
Carica papaya Cpa.g.sc25.46 supercontig_25 - View
Chenopodium quinoa AUR62038143 IDD11: Protein indeterminate-domain 11 C_Quinoa_Scaffold_1289 - View
Chenopodium quinoa AUR62009132 IDD7: Protein indeterminate-domain 7 C_Quinoa_Scaffold_3674 + View
Capsella rubella Carub.0001s4361 PTHR10593:SF24 - INDETERMINATE(ID)-DOMAIN 7 PROTEIN scaffold_1 - View
Capsella rubella Carub.0003s1336 scaffold_3 + View
Cucumis sativus L. CsaV3_3G043830 protein indeterminate-domain 7-like chr3 + View
Cucumis sativus L. CsaV3_4G035690 Protein indeterminate-domain like chr4 - View
Cucumis sativus L. CsaV3_7G034740 protein indeterminate-domain 7 chr7 + View
Daucus carota DCAR_016152 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_007626 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv30372 GWHABJS00000019 - View
Davidia involucrata Dinv27996 GWHABJS00000003 + View
Davidia involucrata Dinv37909 GWHABJS00000006 - View
Durio zibethinus Duzib187G1780 NW_019167860.1 + View
Durio zibethinus Duzib160G0046 NW_019168015.1 + View
Durio zibethinus Duzib235G0039 NW_019167982.1 + View
Durio zibethinus Duzib192G0314 NW_019168037.1 - View
Eucalyptus grandis Eucgr.J02851 Chr10 + View
Erythranthe guttata Migut.I01032 scaffold_9 - View
Eutrema salsugineum Thhalv10020544m.g PTHR10593:SF24 - INDETERMINATE(ID)-DOMAIN 7 PROTEIN scaffold_13 - View
Fragaria x ananassa FAN09G2630 PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Fvb6-2 + View
Fragaria x ananassa FAN14G2605 PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Fvb6-1 + View
Fragaria vesca FvH4_2g31720 PTHR10593//PTHR10593:SF25 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Fvb2 + View
Gossypium hirsutum Gohir.A10G058700 PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED A10 - View
Gossypium hirsutum Gohir.A05G134900 PTHR10593//PTHR10593:SF25 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED A05 + View
Gossypium hirsutum Gohir.D10G060400 PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED D10 - View
Gossypium hirsutum Gohir.D05G136900 PTHR10593//PTHR10593:SF25 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED D05 + View
Glycine max Glyma.08G192300 PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Gm08 + View
Glycine max Glyma.13G349500 PTHR10593:SF24 - INDETERMINATE(ID)-DOMAIN 7 PROTEIN Gm13 + View
Glycine max Glyma.07G009100 PTHR10593:SF24 - INDETERMINATE(ID)-DOMAIN 7 PROTEIN Gm07 + View
Glycine max Glyma.15G024500 PTHR10593:SF24 - INDETERMINATE(ID)-DOMAIN 7 PROTEIN Gm15 - View
Gossypium raimondii Gorai.011G064700 Chr11 - View
Gossypium raimondii Gorai.009G141200 Chr09 + View
Gossypium raimondii Gorai.010G099600 Chr10 + View
Helianthus annuus HanXRQChr09g0276541 Putative zinc finger C2H2-type/integrase DNA-binding domain HanXRQChr09 - View
Hydrangea macrophylla Hma1.2p1_0388F.1_g142410 Hma1.2p1_0388F.1 - View
Lupinus albus Lalb_Chr22g0351811 PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Lalb_Chr22 - View
Lupinus albus Lalb_Chr14g0372791 PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Lalb_Chr14 + View
Lotus japonicus Lj3g0010441 PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED chr3 - View
Lotus japonicus Lj3g0022046 PTHR10593//PTHR10593:SF24 - SERINE/THREONINE-PROTEIN KINASE RIO // INDETERMINATE(ID)-DOMAIN 7 PROTEIN chr3 + View
Lonicera japonica Lj9A519T89 GWHAAZE00000009 - View
Lonicera japonica Lj5A44T114 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_0_11100 PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Lsat_1_v8_lg_4 - View
Malus domestica MD15G1058000 indeterminate(ID)-domain 7 Chr15 + View
Malus domestica MD09G1192300 indeterminate(ID)-domain 7 Chr09 + View
Malus domestica MD08G1063600 indeterminate(ID)-domain 4 Chr08 - View
Manihot esculenta Manes.04G140300 Chromosome04 - View
Manihot esculenta Manes.11G025600 Chromosome11 + View
Medicago truncatula Medtr8g017210 C2H2-like zinc finger protein, putative chr8 - View
Medicago truncatula Medtr2g099990 C2H2-type zinc finger protein chr2 + View
Nicotiana tabacum Nitab4.5_0000255g0230 Zinc finger, C2H2-like, Zinc finger, double-stranded RNA binding, Zinc finger C2H2-type/integrase DNA-binding domain, Zinc finger, C2H2 Nitab4.5_0000255 + View
Petunia axillaris Peaxi162Scf00038g01650 C2H2-like zinc finger protein Peaxi162Scf00038 - View
Punica granatum PGR102G0676 NC_045129.1 - View
Prunus persica Prupe.3G048600 PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Pp03 + View
Pisum sativum Psat4g188200 Zinc-finger double-stranded RNA-binding chr4LG4 + View
Papaver somniferum PSO210G1847 NC_039359.1 + View
Populus trichocarpa Potri.006G227600 PTHR10593//PTHR10593:SF25 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr06 + View
Populus trichocarpa Potri.003G036900 PTHR10593//PTHR10593:SF49 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Chr03 - View
Phaseolus vulgaris Phvul.010G138200 PTHR10593:SF24 - INDETERMINATE(ID)-DOMAIN 7 PROTEIN Chr10 + View
Phaseolus vulgaris Phvul.005G158600 PTHR10593:SF24 - INDETERMINATE(ID)-DOMAIN 7 PROTEIN Chr05 + View
Quercus lobata QL05p012055 5 + View
Rosa chinensis RcHm_v2.0_Chr2g0143461 RcHm_v2.0_Chr2 - View
Rosa chinensis RcHm_v2.0_Chr6g0311101 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim08G0234300 chr08 - View
Salvia bowleyana SalBow6G2815 GWHASIU00000002 - View
Salvia bowleyana SalBow7G0643 GWHASIU00000005 - View
Salix brachista Sabra06G0176100 GWHAAZH00000006 + View
Sechium edule Sed0025048 LG06 - View
Sechium edule Sed0011577 LG07 + View
Sechium edule Sed0019919 LG09 + View
Sechium edule Sed0013448 LG06 + View
Sechium edule Sed0000688 LG13 - View
Solanum lycopersicum Solyc03g121660.3 Protein indeterminate-domain 7 (AHRD V3.3 *** A0A2G2V8T0_CAPBA) SL4.0ch03 - View
Solanum lycopersicum Solyc06g062670.3 Protein indeterminate-domain 7 (AHRD V3.3 *** A0A2G3C8G8_CAPCH) SL4.0ch06 - View
Schrenkiella parvula Sp1g40770 PTHR10593//PTHR10593:SF24 - SERINE/THREONINE-PROTEIN KINASE RIO // INDETERMINATE(ID)-DOMAIN 7 PROTEIN ch1-2 - View
Schrenkiella parvula Sp3g12040 PTHR10593:SF24 - INDETERMINATE(ID)-DOMAIN 7 PROTEIN ch3-1 + View
Solanum pennellii Sopen03g040470 MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations. | Magpie (MGP) | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein Spenn-ch03 - View
Solanum pennellii Sopen06g022130 indeterminate(ID)-domain 11 (IDD11) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding | INVOLVED IN: regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 9 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type , Zinc finger, double-stranded RNA binding | BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 7 . Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400002495 C2H2L domain class transcription factor ST4.03ch03 - View
Solanum tuberosum PGSC0003DMG400004882 DNA/RNA binding protein ST4.03ch06 + View
Selenicereus undatus Hund18710 Scaffold_33675 + View
Trochodendron aralioides TAR624G0643 group9 + View
Trochodendron aralioides TAR626G1656 group3 + View
Trochodendron aralioides TAR383G0521 group10 - View
Theobroma cacao Thecc.09G055400 Indeterminate(ID)-domain 7 Chromosome_9 - View
Theobroma cacao Thecc.06G112200 Chromosome_6 + View
Tarenaya hassleriana THA.LOC104815639 protein indeterminate-domain 11-like isoform X1 NW_010965696.1 - View
Trifolium pratense TPR.G19279 Tp57577_TGAC_v2_scaf_349 - View
Trifolium pratense TPR.G6585 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI63G0629 NC_052240.1 + View
Tripterygium wilfordii TWI32G1280 NC_052254.1 + View
Vaccinium macrocarpon vmacro18780 Similar to IDD7: Protein indeterminate-domain 7 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0331G1822 CM024078.1 - View
Vigna mungo VMungo1080G0915 CM024079.1 - View
Vigna mungo VMungo1215G0657 CM024074.1 - View
Vitis vinifera GSVIVG01016867001 chr9 - View
Vitis vinifera GSVIVG01035391001 chr4 + View