Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0035562 PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Vitis vinifera] Chr13 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G21070 LG-5 - View
Aethionema arabicum Aa31LG10G7510 LG-10 - View
Acer truncatum Atru.chr8.1342 chr8 - View
Acer truncatum Atru.chr3.3104 chr3 + View
Actinidia chinensis Actinidia37750 Lachesis_group5 + View
Actinidia chinensis Actinidia07278 Lachesis_group13 + View
Actinidia chinensis Actinidia06184 Lachesis_group20 - View
Actinidia chinensis Actinidia24255 Lachesis_group24 + View
Arabidopsis lyrata AL4G32030 scaffold_4 - View
Arabidopsis lyrata AL5G33100 scaffold_5 - View
Avicennia marina MSTRG.19303 ScioBoG_25048_HRSCAF_25167 - View
Avicennia marina MSTRG.12389 ScioBoG_17730_HRSCAF_17811 + View
Amaranthus hybridus Ah.12g059280 E3 ubiquitin-protein ligase PUB23 (EC 2.3.2.27) (Plant U-box protein 23) (RING-type E3 ubiquitin transferase PUB23) (U-box domain-containing protein 23) AmaHy_arrow1_Scaffold_12 + View
Amaranthus hybridus Ah.02g115710 AmaHy_arrow1_Scaffold_2 + View
Aquilegia oxysepala Aqoxy1G00648 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UUM6SM PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TG9TSU PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 arahy.Tifrunner.gnm1.Arahy.18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VTD8RL PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.RTT5QY PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 arahy.Tifrunner.gnm1.Arahy.13 + View
Arabidopsis thaliana AT3G52450 plant U-box 22 Encodes a cytoplasmically localized U-box domain E3 ubiquitin ligase protein that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity. plant U-box 22 (PUB22)%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: plant U-box 23 (TAIR:AT2G35930.1)%3B Has 2414 Blast hits to 2402 proteins in 185 species: Archae - 0%3B Bacteria - 30%3B Metazoa - 243%3B Fungi - 90%3B Plants - 1816%3B Viruses - 3%3B Other Eukaryotes - 232 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT2G35930 plant U-box 23 Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity. plant U-box 23 (PUB23)%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: plant U-box 22 (TAIR:AT3G52450.1)%3B Has 2501 Blast hits to 2466 proteins in 187 species: Archae - 0%3B Bacteria - 34%3B Metazoa - 243%3B Fungi - 89%3B Plants - 1910%3B Viruses - 3%3B Other Eukaryotes - 222 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaB01g00367 ChrB01 + View
Brassica carinata BcaC07g39609 ChrC07 - View
Brassica carinata BcaC01g05685 ChrC01 + View
Brassica carinata BcaC02g09258 ChrC02 + View
Brassica carinata BcaB02g08569 ChrB02 + View
Brassica carinata BcaC06g32914 ChrC06 - View
Brassica carinata BcaB06g28895 ChrB06 - View
Brassica napus A04p27430 A04 - View
Brassica napus A04p06970 A04 + View
Brassica napus C07p46970 C07 - View
Brassica napus C04p40600 C04 + View
Brassica napus C08p27690 C08 - View
Brassica napus C03p23210 C03 - View
Brassica napus A09p45510 A09 - View
Brassica oleracea BolC4t25639H C4 + View
Brassica oleracea BolC7t45214H C7 - View
Brassica oleracea BolC8t50389H C8 - View
Brassica oleracea BolC5t34274H C5 + View
Brassica oleracea BolC3t14722H C3 - View
Brassica rapa BraA04t16395Z A04 + View
Brassica rapa BraA04t18241Z A04 - View
Brassica rapa BraA09t40013Z A09 - View
Brassica rapa BraA03t13989Z A03 - View
Beta vulgaris EL10Ac7g16290 PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr7_EL10_PGA_scaffold5 + View
Beta vulgaris EL10Ac5g11863 PTHR22849//PTHR22849:SF38 - WDSAM1 PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Chr5_EL10_PGA_scaffold2 + View
Capsicum annuum CAN.G574.1 PGAv.1.6.scaffold574 - View
Cannabis sativa CANSAT64G0361 NC_044379.1 + View
Cicer arietinum L. Ca_09061_v3 Ca_LG3_v3 + View
Cicer arietinum L. Ca_01632_v3 Ca_LG1_v3 + View
Cicer arietinum L. Ca_11694_v3 Ca_LG4_v3 - View
Corylus avellana Haze_23561 Similar to PUB24: E3 ubiquitin-protein ligase PUB24 (Arabidopsis thaliana OX%3D3702) 6 + View
Coffea canephora Cc06_g06620 Putative E3 ubiquitin-protein ligase PUB24 chr6 + View
Citrus clementina Ciclev10028557m.g scaffold_8 + View
Citrus clementina Ciclev10011844m.g scaffold_6 - View
Ceratophyllum demersum CDE04G3568 2 - View
Ceratophyllum demersum CDE12G0227 10 + View
Carpinus fangiana Cfa020036 Cfa08 + View
Cardamine hirsuta CARHR162220 U-box domain-containing protein Chr5 - View
Carya illinoinensis CiPaw.13G128800 PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr13 - View
Carya illinoinensis CiPaw.10G018100 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr10 + View
Carya illinoinensis CiPaw.09G021300 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr09 + View
Citrullus lanatus ClCG02G022440 U-box domain-containing protein CG_Chr02 - View
Citrullus lanatus ClCG10G018310 U-box domain-containing protein CG_Chr10 - View
Cucumis melo MELO3C009543.2 RING-type E3 ubiquitin transferase chr04 - View
Cucumis melo MELO3C014520.2 RING-type E3 ubiquitin transferase chr05 + View
Carica papaya Cpa.g.sc104.23 supercontig_104 - View
Chenopodium quinoa AUR62036368 PUB23: E3 ubiquitin-protein ligase PUB23 C_Quinoa_Scaffold_2079 - View
Chenopodium quinoa AUR62030729 PUB24: E3 ubiquitin-protein ligase PUB24 C_Quinoa_Scaffold_2000 - View
Chenopodium quinoa AUR62001555 PUB24: E3 ubiquitin-protein ligase PUB24 C_Quinoa_Scaffold_2716 + View
Chenopodium quinoa AUR62020225 PUB23: E3 ubiquitin-protein ligase PUB23 C_Quinoa_Scaffold_2465 + View
Capsella rubella Carub.0005s1884 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED scaffold_5 - View
Cucumis sativus L. CsaV3_6G038570 RING-type E3 ubiquitin transferase chr6 - View
Cucumis sativus L. CsaV3_3G038010 RING-type E3 ubiquitin transferase chr3 + View
Daucus carota DCAR_020700 hypothetical protein DCARv2_Chr6 + View
Daucus carota DCAR_016915 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv31763 GWHABJS00000015 + View
Davidia involucrata Dinv12343 GWHABJS00000021 - View
Davidia involucrata Dinv17492 GWHABJS00000010 - View
Durio zibethinus Duzib093G1915 NW_019167937.1 - View
Durio zibethinus Duzib128G1255 NW_019168481.1 - View
Durio zibethinus Duzib106G0989 NW_019168492.1 - View
Durio zibethinus Duzib170G0174 NW_019167871.1 + View
Durio zibethinus Duzib150G1488 NW_019167882.1 + View
Erigeron canadensis ECA233G0918 Conyza_canadensis_scaffold:1 - View
Erigeron canadensis ECA238G3677 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA248G0315 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.J00575 Chr10 + View
Eucalyptus grandis Eucgr.A02579 Chr01 - View
Eucalyptus grandis Eucgr.K01926 Chr11 - View
Erythranthe guttata Migut.J00696 scaffold_10 - View
Erythranthe guttata Migut.L01827 scaffold_12 - View
Erythranthe guttata Migut.N02452 scaffold_14 + View
Eutrema salsugineum Thhalv10010389m.g PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED scaffold_16 + View
Fragaria x ananassa FAN14G3832 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Fvb6-1 - View
Fragaria x ananassa FAN09G1453 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Fvb6-2 - View
Fragaria x ananassa FAN05G2037 PTHR22849//PTHR22849:SF38 - WDSAM1 PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Fvb6-3 - View
Fragaria x ananassa FAN02G4568 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Fvb6-4 + View
Fragaria x ananassa FAN05G3678 PTHR22849//PTHR22849:SF38 - WDSAM1 PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Fvb6-3 - View
Fragaria x ananassa FAN16G2662 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Fvb3-3 - View
Fragaria x ananassa FAN21G2467 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Fvb3-2 + View
Fragaria vesca FvH4_6g20390 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Fvb6 + View
Gossypium hirsutum Gohir.D07G117000 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED D07 + View
Gossypium hirsutum Gohir.A01G201100 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED A01 - View
Gossypium hirsutum Gohir.D09G129900 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED D09 - View
Gossypium hirsutum Gohir.D04G091600 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED D04 - View
Gossypium hirsutum Gohir.D01G191000 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED D01 - View
Gossypium hirsutum Gohir.A07G113400 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED A07 + View
Gossypium hirsutum Gohir.A09G133700 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED A09 - View
Glycine max Glyma.10G081900 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Gm10 + View
Glycine max Glyma.12G095000 PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 Gm12 + View
Glycine max Glyma.02G195900 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Gm02 - View
Glycine max Glyma.19G199300 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Gm19 - View
Glycine max Glyma.12G188900 PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 Gm12 + View
Glycine max Glyma.03G202600 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Gm03 + View
Glycine max Glyma.11G178046 PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 Gm11 - View
Gossypium raimondii Gorai.009G396600 Chr09 - View
Gossypium raimondii Gorai.002G234800 Chr02 - View
Gossypium raimondii Gorai.001G125700 Chr01 + View
Gossypium raimondii Gorai.006G148900 Chr06 - View
Lupinus albus Lalb_Chr02g0154431 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Lalb_Chr02 - View
Lupinus albus Lalb_Chr25g0287971 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Lalb_Chr25 - View
Lupinus albus Lalb_Chr20g0111331 PTHR22849//PTHR22849:SF38 - WDSAM1 PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Lalb_Chr20 - View
Lupinus albus Lalb_Chr06g0172621 PTHR22849//PTHR22849:SF38 - WDSAM1 PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Lalb_Chr06 + View
Lotus japonicus Lj1g0027254 PTHR22849//PTHR22849:SF38 - WDSAM1 PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED chr1 - View
Lotus japonicus Lj3g0009101 PTHR22849:SF0 - WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 chr3 + View
Lotus japonicus Lj3g0012262 PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED chr3 + View
Lotus japonicus Lj5g0025220 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED chr5 - View
Lonicera japonica Lj1C1054T2 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_1_58280 Lsat_1_v8_lg_1 - View
Lactuca sativa Lsat_1_v5_gn_2_53860 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Lsat_1_v8_lg_2 - View
Lactuca sativa Lsat_1_v5_gn_6_33780 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Lsat_1_v8_lg_6 - View
Malus domestica MD14G1039900 plant U-box 24 Chr14 + View
Malus domestica MD12G1040800 plant U-box 24 Chr12 + View
Manihot esculenta Manes.08G034000 Chromosome08 + View
Manihot esculenta Manes.09G045900 Chromosome09 + View
Medicago truncatula Medtr7g106340 E3 ubiquitin-protein ligase PUB23-like protein chr7 + View
Medicago truncatula Medtr1g056840 E3 ubiquitin-protein ligase PUB23-like protein chr1 - View
Nelumbo nucifera Nn6g34677 chr6 + View
Nicotiana tabacum Nitab4.5_0000380g0040 U box domain, Armadillo-type fold, Zinc finger, RING/FYVE/PHD-type, Armadillo-like helical Nitab4.5_0000380 - View
Olea europaea Oeu045050.1 chr9 + View
Oryza sativa ssp. japonica Os02g0539200 Zinc finger, RING/FYVE/PHD-type domain containing protein. chr02 - View
Oryza sativa ssp. japonica Os04g0418500 Similar to photoperiod responsive protein. chr04 + View
Oryza sativa ssp. japonica Os12g0161100 Zinc finger, RING/FYVE/PHD-type domain containing protein. chr12 + View
Petunia axillaris Peaxi162Scf00582g00085 U-box domain-containing protein 25 Peaxi162Scf00582 + View
Punica granatum PGR119G0721 NC_045132.1 + View
Punica granatum PGR004G1472 NC_045131.1 - View
Punica granatum PGR142G2037 NC_045128.1 + View
Prunus persica Prupe.7G094000 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Pp07 - View
Prunus persica Prupe.6G145200 PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Pp06 + View
Papaver somniferum PSO384G3321 NC_039368.1 - View
Populus trichocarpa Potri.016G069400 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Chr16 - View
Populus trichocarpa Potri.006G202600 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Chr06 - View
Phaseolus vulgaris Phvul.001G196000 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Chr01 + View
Phaseolus vulgaris Phvul.007G267700 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Chr07 - View
Phaseolus vulgaris Phvul.005G119100 PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr05 + View
Phaseolus vulgaris Phvul.011G099300 PTHR22849:SF0 - WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 Chr11 + View
Quercus lobata QL07p036477 7 - View
Quercus lobata QL01p019540 1 + View
Rosa chinensis RcHm_v2.0_Chr3g0476021 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim13G0196600 chr13 + View
Rhododendron simsii Rhsim03G0064200 chr03 - View
Striga asiatica SGA_v2.0_scaffold184G40015 scaffold184 - View
Striga asiatica SGA_v2.0_scaffold31G12862 scaffold31 + View
Salvia bowleyana SalBow3G0253 GWHASIU00000006 + View
Salvia bowleyana SalBow5G4772 GWHASIU00000003 + View
Salix brachista Sabra16G0070200 GWHAAZH00000016 - View
Salix brachista Sabra06G0155800 GWHAAZH00000006 - View
Salix brachista Sabra16G0127500 GWHAAZH00000016 + View
Simmondsia chinensis Sc01g0005510 GWHAASQ00000001 - View
Simmondsia chinensis Sc12g0004950 GWHAASQ00000012 + View
Sechium edule Sed0013851 LG12 - View
Solanum lycopersicum Solyc01g007000.4 RING-type E3 ubiquitin transferase (AHRD V3.3 *** Q3HLY8_CAPAN) SL4.0ch01 + View
Solanum lycopersicum Solyc06g074140.1 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3CBE3_CAPCH) SL4.0ch06 + View
Schrenkiella parvula Sp5g09850 PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED ch5-1 + View
Solanum pennellii Sopen06g030570 Encodes a U-box-domain-containing E3 ubiquitin ligase that acts as a negative regulator of PAMP-triggered immunity. | plant U-box 24 (PUB24) | FUNCTIONS IN: ubiquitin-protein ligase activity, binding | INVOLVED IN: respiratory burst involved in defense response, protein autoubiquitination, response to chitin, defense response | LOCATED IN: ubiquitin ligase complex | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: plant U-box 23 Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400021360 U-box protein ST4.03ch01 + View
Trochodendron aralioides TAR633G1992 group2 + View
Trochodendron aralioides TAR636G1239 group1 - View
Theobroma cacao Thecc.05G105300 Plant U-box 24 Chromosome_5 + View
Tarenaya hassleriana THA.LOC104803899 E3 ubiquitin-protein ligase PUB22 NW_010960187.1 - View
Trifolium pratense TPR.G2819 Tp57577_TGAC_v2_LG1 - View
Trifolium pratense TPR.G4208 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI53G1781 NC_052244.1 - View
Tripterygium wilfordii TWI31G0228 NC_052233.1 + View
Tripterygium wilfordii TWI79G0743 NC_052238.1 + View
Tripterygium wilfordii TWI74G0091 NC_052234.1 + View
Utricularia gibba unitig_22.g5142 unitig_22 - View
Vigna mungo VMungo0720G1108 CM024071.1 + View
Vigna mungo VMungo1127G1809 CM024076.1 + View
Vigna mungo VMungo1080G0772 CM024079.1 + View
Vigna mungo VMungo1383G2574 CM024070.1 + View
Vitis vinifera GSVIVG01011139001 chr8 - View
Zea mays Zm00001eb083490 Zm00001e008167 E3 ubiquitin-protein ligase PUB23 2 + View