Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0001036 PREDICTED: pectinesterase QRT1 [Eucalyptus grandis] Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G11540 LG-3 + View
Actinidia chinensis Actinidia05018 Lachesis_group19 - View
Actinidia chinensis Actinidia30417 Lachesis_group10 + View
Actinidia chinensis Actinidia35390 Lachesis_group2 + View
Arabidopsis lyrata AL8G31160 scaffold_8 + View
Amaranthus hybridus Ah.04g166480 Pectinesterase QRT1 (AtQRT1) (PE QRT1) (EC 3.1.1.11) (Pectin methylesterase 62) (AtPME62) (Pectin methylesterase QRT1) (Protein QUARTET 1) AmaHy_arrow1_Scaffold_4 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X1DC6B PTHR31321//PTHR31321:SF31 - FAMILY NOT NAMED // PECTINESTERASE QRT1 arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3M1W8D PTHR31321//PTHR31321:SF31 - FAMILY NOT NAMED // PECTINESTERASE QRT1 arahy.Tifrunner.gnm1.Arahy.07 - View
Arabidopsis thaliana AT5G47500 Pectin lyase-like superfamily protein predicted to encode a pectin methylesterase Pectin lyase-like superfamily protein%3B FUNCTIONS IN: pectinesterase activity%3B INVOLVED IN: cell wall modification%3B LOCATED IN: endomembrane system%2C cell wall%2C plant-type cell wall%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Pectinesterase%2C active site (InterPro:IPR018040)%2C Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectinesterase%2C catalytic (InterPro:IPR000070)%2C Pectin lyase fold (InterPro:IPR012334)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G19730.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT5G55590 Pectin lyase-like superfamily protein Encodes a protein with pectin methylesterase activity. No change in activity were detected in mutants defective in this gene%2C which was interpreted as a result of redundancy of product function with other pectin methylesterases. The gene product is required for pollen separation during normal development. In qrt mutants%2C the outer walls of the four meiotic products of the pollen mother cell are fused%2C and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation. QUARTET 1 (QRT1)%3B FUNCTIONS IN: pectinesterase activity%3B INVOLVED IN: pectin catabolic process%3B LOCATED IN: endomembrane system%2C cell wall%2C plant-type cell wall%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: 5 post anthesis%2C sepals enclosing floral bud%2C petal differentiation and expansion stage%2C fruit development stages%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectinesterase%2C catalytic (InterPro:IPR000070)%2C Pectin lyase fold (InterPro:IPR012334)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT5G47500.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB08g35918 ChrB08 + View
Brassica carinata BcaC03g16965 ChrC03 - View
Brassica napus C09p46550 C09 + View
Brassica napus C02p16000 C02 - View
Brassica napus A10p12840 A10 + View
Brassica oleracea BolC2t07706H C2 - View
Brassica oleracea BolC9t57508H C9 + View
Brassica rapa BraA10t43377Z A10 + View
Brassica rapa BraA06t27373Z A06 + View
Beta vulgaris EL10Ac4g07606 PTHR31321:SF31 - PECTINESTERASE QRT1 Chr4_EL10_PGA_scaffold1 + View
Cannabis sativa CANSAT11G2396 NC_044377.1 - View
Cicer arietinum L. Ca_06386_v3 Ca_LG2_v3 + View
Corylus avellana Haze_09804 Similar to QRT1: Pectinesterase QRT1 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc05_g14800 Pectinesterase QRT1 chr5 + View
Citrus clementina Ciclev10010593m.g scaffold_1 + View
Carpinus fangiana Cfa020214 Cfa08 - View
Cardamine hirsuta CARHR268900 Pectinesterase Chr8 + View
Carya illinoinensis CiPaw.11G202200 PTHR31321:SF31 - PECTINESTERASE QRT1 Chr11 + View
Carya illinoinensis CiPaw.12G136500 PTHR31321//PTHR31321:SF31 - FAMILY NOT NAMED // PECTINESTERASE QRT1 Chr12 + View
Citrullus lanatus ClCG09G021160 Pectinesterase CG_Chr09 + View
Cucumis melo MELO3C024917.2 Pectinesterase chr01 - View
Carica papaya Cpa.g.sc12.174 supercontig_12 - View
Chenopodium quinoa AUR62017068 QRT1: Pectinesterase QRT1 C_Quinoa_Scaffold_3787 - View
Capsella rubella Carub.0008s1596 PTHR31321//PTHR31321:SF31 - FAMILY NOT NAMED // PECTINESTERASE QRT1 scaffold_8 + View
Cucumis sativus L. CsaV3_7G018350 Pectinesterase chr7 - View
Daucus carota DCAR_013224 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv40843 GWHABJS00000013 - View
Davidia involucrata Dinv10319 GWHABJS00000001 + View
Durio zibethinus Duzib170G0070 NW_019167871.1 - View
Erigeron canadensis ECA236G1911 Conyza_canadensis_scaffold:3 - View
Erythranthe guttata Migut.M01665 scaffold_13 - View
Erythranthe guttata Migut.H01765 scaffold_8 - View
Eutrema salsugineum Thhalv10013811m.g PTHR31321:SF31 - PECTINESTERASE QRT1 scaffold_2 - View
Eutrema salsugineum Thhalv10000935m.g PTHR31321:SF19 - PECTINESTERASE 68-RELATED scaffold_20 - View
Gossypium hirsutum Gohir.D01G075400 PTHR31321//PTHR31321:SF31 - FAMILY NOT NAMED // PECTINESTERASE QRT1 D01 + View
Gossypium hirsutum Gohir.D13G137400 PTHR31321//PTHR31321:SF31 - FAMILY NOT NAMED // PECTINESTERASE QRT1 D13 - View
Gossypium hirsutum Gohir.A01G090100 PTHR31321//PTHR31321:SF31 - FAMILY NOT NAMED // PECTINESTERASE QRT1 A01 + View
Gossypium hirsutum Gohir.A13G133900 PTHR31321//PTHR31321:SF31 - FAMILY NOT NAMED // PECTINESTERASE QRT1 A13 - View
Glycine max Glyma.14G014400 PTHR31321//PTHR31321:SF31 - FAMILY NOT NAMED // PECTINESTERASE QRT1 Gm14 - View
Glycine max Glyma.02G299200 PTHR31321//PTHR31321:SF31 - FAMILY NOT NAMED // PECTINESTERASE QRT1 Gm02 + View
Gossypium raimondii Gorai.013G154000 Chr13 - View
Gossypium raimondii Gorai.002G098600 Chr02 + View
Hydrangea macrophylla Hma1.2p1_0036F.1_g022570 Hma1.2p1_0036F.1 - View
Lupinus albus Lalb_Chr04g0247931 PTHR31321:SF31 - PECTINESTERASE QRT1 Lalb_Chr04 - View
Lupinus albus Lalb_Chr17g0348891 PTHR31321//PTHR31321:SF31 - FAMILY NOT NAMED // PECTINESTERASE QRT1 Lalb_Chr17 + View
Lonicera japonica Lj1A888T38 GWHAAZE00000001 + View
Malus domestica MD03G1186900 Pectin lyase-like superfamily protein Chr03 - View
Malus domestica MD11G1201900 Pectin lyase-like superfamily protein Chr11 - View
Manihot esculenta Manes.15G061800 Chromosome15 - View
Medicago truncatula Medtr5g095490 pectinesterase chr5 + View
Nicotiana tabacum Nitab4.5_0000461g0170 Pectin lyase fold, Pectin lyase fold/virulence factor, Pectinesterase, catalytic Nitab4.5_0000461 + View
Olea europaea Oeu057090.1 chr18 - View
Punica granatum PGR031G3836 NC_045127.1 - View
Prunus persica Prupe.4G239700 PTHR31321:SF31 - PECTINESTERASE QRT1 Pp04 + View
Pisum sativum Psat2g008200 Pectinesterase chr2LG1 - View
Pisum sativum Psat2g010000 Pectinesterase chr2LG1 + View
Papaver somniferum PSO675G5595 NC_039358.1 - View
Populus trichocarpa Potri.001G365700 PTHR31321//PTHR31321:SF31 - FAMILY NOT NAMED // PECTINESTERASE QRT1 Chr01 + View
Phaseolus vulgaris Phvul.008G277900 PTHR31321:SF31 - PECTINESTERASE QRT1 Chr08 + View
Quercus lobata QL08p004826 8 - View
Rhododendron simsii Rhsim06G0227400 chr06 + View
Rhododendron simsii Rhsim04G0014000 chr04 - View
Striga asiatica SGA_v2.0_scaffold171G38883 scaffold171 - View
Striga asiatica SGA_v2.0_scaffold8G04403 scaffold8 + View
Striga asiatica SGA_v2.0_scaffold42G16005 scaffold42 - View
Salix brachista Sabra16G0239300 GWHAAZH00000016 + View
Simmondsia chinensis Sc03g0011130 GWHAASQ00000003 - View
Sechium edule Sed0008909 LG04 - View
Solanum lycopersicum Solyc07g065350.2 Pectinesterase (AHRD V3.3 *** A0A2I4DU44_9ROSI) SL4.0ch07 + View
Schrenkiella parvula Sp2g12230 PTHR31321:SF19 - PECTINESTERASE 68-RELATED ch2-4 - View
Schrenkiella parvula Sp6g17510 PTHR31321//PTHR31321:SF31 - FAMILY NOT NAMED // PECTINESTERASE QRT1 ch6-6 + View
Solanum pennellii Sopen07g033550 Encodes a protein with pectin methylesterase activity. No change in activity were detected in mutants defective in this gene, which was interpreted as a result of redundancy of product function with other pectin methylesterases. The gene product is required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation. | QUARTET 1 (QRT1) | FUNCTIONS IN: pectinesterase activity | INVOLVED IN: pectin catabolic process | LOCATED IN: endomembrane system, cell wall, plant-type cell wall | EXPRESSED IN: 8 plant structures | EXPRESSED DURING: 5 post anthesis, sepals enclosing floral bud, petal differentiation and expansion stage, fruit development stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectinesterase, catalytic , Pectin lyase fold | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG400022287 Pectinesterase QRT1 ST4.03ch07 + View
Trochodendron aralioides TAR626G0205 group3 - View
Trochodendron aralioides TAR629G0394 group0 - View
Trochodendron aralioides TAR624G1093 group9 + View
Theobroma cacao Thecc.07G016700 Pectin lyase-like superfamily protein Chromosome_7 - View
Trifolium pratense TPR.G8586 Tp57577_TGAC_v2_LG4 - View
Tripterygium wilfordii TWI38G1013 NC_052252.1 + View
Tripterygium wilfordii TWI39G0527 NC_052250.1 - View
Vaccinium macrocarpon vmacro22712 Similar to QRT1: Pectinesterase QRT1 (Arabidopsis thaliana OX%3D3702) scaffold00446_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G0270 CM024073.1 + View
Vitis vinifera GSVIVG01014641001 chr19 + View