Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0018087 PREDICTED: UPF0392 protein RCOM_0530710 [Sesamum indicum] Chr2 + View
CSS0031107 hypothetical protein JCGZ_10186 [Jatropha curcas] Chr2 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G5370 LG-2 - View
Aethionema arabicum Aa31LG9G920 LG-9 - View
Acer truncatum Atru.chr6.2478 chr6 + View
Actinidia chinensis Actinidia36159 Lachesis_group4 - View
Arabidopsis lyrata AL5G16650 scaffold_5 - View
Arabidopsis lyrata AL7G49020 scaffold_7 - View
Avicennia marina MSTRG.24062 ScioBoG_3895_HRSCAF_3912 + View
Aquilegia oxysepala Aqoxy5G03563 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.R689L2 PF00097 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) arahy.Tifrunner.gnm1.Arahy.06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q0SVNI PF00097 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) arahy.Tifrunner.gnm1.Arahy.16 - View
Arabidopsis thaliana AT5G40720 C3H4 type zinc finger protein (DUF23) CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166)%3B BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G27330.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT3G27330 zinc finger (C3HC4-type RING finger) family protein zinc finger (C3HC4-type RING finger) family protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Protein of unknown function DUF23 (InterPro:IPR008166)%3B BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G40720.1)%3B Has 9172 Blast hits to 9085 proteins in 2351 species: Archae - 0%3B Bacteria - 208%3B Metazoa - 7155%3B Fungi - 537%3B Plants - 665%3B Viruses - 17%3B Other Eukaryotes - 590 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaB02g07931 ChrB02 - View
Brassica carinata BcaC08g44478 ChrC08 + View
Brassica carinata BcaC06g31011 ChrC06 - View
Brassica napus A06p41270 A06 + View
Brassica napus C07p36380 C07 - View
Brassica napus A07p20470 A07 + View
Brassica napus C02p54100 C02 - View
Brassica napus C06p19330 C06 + View
Brassica oleracea BolC6t37128H C6 + View
Brassica oleracea BolC7t44157H C7 - View
Brassica oleracea BolC2t11472H C2 - View
Brassica rapa BraA07t29741Z A07 + View
Brassica rapa BraA06t27051Z A06 + View
Brassica rapa BraA02t08540Z A02 - View
Capsicum annuum CAN.G473.54 PGAv.1.6.scaffold473 + View
Cannabis sativa CANSAT64G1555 NC_044379.1 - View
Corylus avellana Haze_14807 Similar to RCOM_0530710: Glycosyltransferase family 92 protein RCOM_0530710 (Ricinus communis OX%3D3988) 5 + View
Citrus clementina Ciclev10017544m.g scaffold_2 - View
Carpinus fangiana Cfa007285 Cfa03 - View
Cardamine hirsuta CARHR148650 zinc finger (C3HC4-type RING finger) family protein Chr5 - View
Carya illinoinensis CiPaw.04G032700 PF00097 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) Chr04 + View
Carya illinoinensis CiPaw.03G049800 PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED Chr03 + View
Citrullus lanatus ClCG05G013200 Tripartite motif-containing protein 65 CG_Chr05 + View
Cucumis melo MELO3C014848.2 Zinc finger, RING-type chr06 - View
Cucumis melo MELO3C008225.2 glycosyltransferase family 92 protein RCOM_0530710-like chr03 - View
Corchorus olitorius COL.COLO4_29270 hypothetical protein AWUE01020282.1 + View
Capsella rubella Carub.0005s0563 PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED scaffold_5 - View
Capsella rubella Carub.0007s3476 PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED scaffold_7 - View
Cucumis sativus L. CsaV3_6G001280 glycosyltransferase family 92 protein RCOM_0530710-like chr6 - View
Cucumis sativus L. CsaV3_3G027350 E3 ubiquitin-protein ligase RNF168-like chr3 - View
Davidia involucrata Dinv33388 GWHABJS00000014 - View
Davidia involucrata Dinv25699 GWHABJS00000012 + View
Durio zibethinus Duzib264G0509 NW_019167960.1 - View
Durio zibethinus Duzib187G1086 NW_019167860.1 - View
Durio zibethinus Duzib147G1186 NW_019168470.1 + View
Erigeron canadensis ECA238G1906 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA232G2553 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.I01697 Chr09 - View
Erythranthe guttata Migut.E00129 scaffold_5 - View
Erythranthe guttata Migut.H00053 scaffold_8 + View
Eutrema salsugineum Thhalv10028205m.g PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED scaffold_14 - View
Eutrema salsugineum Thhalv10003629m.g PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED scaffold_6 + View
Fragaria x ananassa FAN14G2882 PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED Fvb6-1 - View
Fragaria x ananassa FAN09G4850 PTHR21461//PTHR21461:SF10 - UNCHARACTERIZED // C3H4 TYPE ZINC FINGER PROTEIN-RELATED Fvb6-2 - View
Fragaria x ananassa FAN05G3425 PF00097 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) Fvb6-3 - View
Fragaria x ananassa FAN02G2178 PF00097//PF01697 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // Glycosyltransferase family 92 (Glyco_transf_92) Fvb6-4 + View
Fragaria vesca FvH4_6g52450 PTHR21461//PTHR21461:SF10 - UNCHARACTERIZED // C3H4 TYPE ZINC FINGER PROTEIN-RELATED Fvb6 + View
Gossypium hirsutum Gohir.D11G069600 PF00097 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) D11 - View
Gossypium hirsutum Gohir.D09G032600 PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED D09 + View
Gossypium hirsutum Gohir.A11G065300 PF00097 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) A11 - View
Gossypium hirsutum Gohir.A09G032600 PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED A09 + View
Glycine max Glyma.16G063400 PF00097 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) Gm16 - View
Glycine max Glyma.19G081400 PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED Gm19 + View
Gossypium raimondii Gorai.006G037600 Chr06 + View
Gossypium raimondii Gorai.007G074400 Chr07 - View
Helianthus annuus HanXRQChr14g0451011 Probable UPF0392 protein RCOM_0530710 HanXRQChr14 - View
Helianthus annuus HanXRQChr09g0255621 Putative zinc finger, RING/FYVE/PHD-type HanXRQChr09 - View
Hydrangea macrophylla Hma1.2p1_0279F.1_g112200 Hma1.2p1_0279F.1 + View
Lupinus albus Lalb_Chr24g0403421 PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED Lalb_Chr24 - View
Lotus japonicus Lj1g0014156 PF00097 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) chr1 - View
Lonicera japonica Lj7A605T74 GWHAAZE00000007 + View
Lonicera japonica Lju41A46T88 GWHAAZE00000094 + View
Lactuca sativa Lsat_1_v5_gn_2_93580 Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_4_183800 PF00097 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) Lsat_1_v8_lg_4 + View
Magnolia biondii MBI11_g40895_MAGBIO AED:0.09 Chr11 - View
Malus domestica MD09G1017800 zinc finger (C3HC4-type RING finger) family protein Chr09 - View
Malus domestica MD17G1018600 zinc finger (C3HC4-type RING finger) family protein Chr17 - View
Manihot esculenta Manes.17G107700 Chromosome17 - View
Manihot esculenta Manes.15G156000 Chromosome15 + View
Nelumbo nucifera Nn3g16573 chr3 - View
Nelumbo nucifera Nn4g22453 chr4 - View
Nicotiana tabacum Nitab4.5_0000040g0530 Zinc finger, RING/FYVE/PHD-type Nitab4.5_0000040 + View
Nicotiana tabacum Nitab4.5_0001863g0200 Zinc finger, RING-type, conserved site, Zinc finger, RING-type, Zinc finger, C3HC4 RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0001863 + View
Nicotiana tabacum Nitab4.5_0001031g0080 Zinc finger, RING-type, Zinc finger, RING-type, conserved site, Zinc finger, C3HC4 RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0001031 + View
Olea europaea Oeu048591.1 chr14 - View
Olea europaea Oeu050436.1 scaffold567 - View
Olea europaea Oeu058752.1 chr10 - View
Petunia axillaris Peaxi162Scf00420g00220 UPF0392 protein RCOM_0530710 Peaxi162Scf00420 + View
Petunia axillaris Peaxi162Scf00080g01722 zinc finger (C3HC4-type RING finger) family protein Peaxi162Scf00080 - View
Punica granatum PGR083G2095 NC_045133.1 - View
Punica granatum PGR142G1038 NC_045128.1 + View
Prunus persica Prupe.3G299100 PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED Pp03 + View
Papaver somniferum PSO063G5680 NC_039364.1 - View
Populus trichocarpa Potri.001G336766 PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED Chr01 + View
Phaseolus vulgaris Phvul.008G147000 PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED Chr08 - View
Quercus lobata QL02p073037 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr2g0174091 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim10G0011600 chr10 - View
Striga asiatica SGA_v2.0_scaffold135G34937 scaffold135 + View
Striga asiatica SGA_v2.0_scaffold47G17542 scaffold47 + View
Salvia bowleyana SalBow7G2506 GWHASIU00000005 + View
Salix brachista Sabra16G0217600 GWHAAZH00000016 + View
Simmondsia chinensis Sc16g0003720 GWHAASQ00000016 - View
Simmondsia chinensis Sc03g0006890 GWHAASQ00000003 - View
Sechium edule Sed0019906 LG08 + View
Sechium edule Sed0005287 LG06 - View
Sechium edule Sed0025932 LG11 + View
Solanum lycopersicum Solyc02g067970.4 Zinc finger (C3HC4-type RING finger) family protein (AHRD V3.3 *-* F4IWG7_ARATH) SL4.0ch02 - View
Solanum lycopersicum Solyc02g093750.3 C3H4 type zinc finger protein (DUF23) (AHRD V3.3 *** Q9FM26_ARATH) SL4.0ch02 + View
Schrenkiella parvula Sp2g16520 PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED ch2-4 - View
Solanum pennellii Sopen02g038390 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 | BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein Spenn-ch02 + View
Solanum pennellii Sopen02g017100 zinc finger (C3HC4-type RING finger) family protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Protein of unknown function DUF23 | BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400006969 Zinc finger family protein ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400020271 Ubiquitin-protein ligase ST4.03ch02 + View
Trochodendron aralioides TAR371G1081 group13 + View
Trochodendron aralioides TAR622G0035 group8 + View
Theobroma cacao Thecc.04G025000 Chromosome_4 - View
Tarenaya hassleriana THA.LOC104825305 glycosyltransferase family 92 protein RCOM_0530710 NW_010967136.1 - View
Tarenaya hassleriana THA.LOC104823964 glycosyltransferase family 92 protein RCOM_0530710-like NW_010966881.1 + View
Tarenaya hassleriana THA.LOC104805349 uncharacterized protein LOC104805349 NW_010961290.1 - View
Tripterygium wilfordii TWI12G0650 NC_052243.1 - View
Vaccinium macrocarpon vmacro05918 Similar to RCOM_0530710: Glycosyltransferase family 92 protein RCOM_0530710 (Ricinus communis OX%3D3988) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01003965001 chr14 - View