Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0015197 PREDICTED: uncharacterized protein LOC100253430 [Vitis vinifera] Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G9940 LG-9 - View
Aethionema arabicum Aa31LG2G80 LG-2 + View
Aethionema arabicum Aa31LG6G4360 LG-6 - View
Acer truncatum Atru.chr6.3260 chr6 + View
Acer truncatum Atru.chr10.2316 chr10 - View
Actinidia chinensis Actinidia02333 Lachesis_group20 - View
Arabidopsis lyrata AL6G47750 scaffold_6 + View
Arabidopsis lyrata AL7G31380 scaffold_7 + View
Arabidopsis lyrata AL2G13530 scaffold_2 - View
Avicennia marina MSTRG.7186 ScioBoG_102840_HRSCAF_103099 + View
Amaranthus hybridus Ah.09g234460 AmaHy_arrow1_Scaffold_9 - View
Aquilegia oxysepala Aqoxy1G02913 CHR01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KST8W5 KOG4172 - Predicted E3 ubiquitin ligase arahy.Tifrunner.gnm1.Arahy.04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IL02F1 KOG4172 - Predicted E3 ubiquitin ligase arahy.Tifrunner.gnm1.Arahy.14 + View
Arabidopsis thaliana AT4G03965 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G22250.1)%3B Has 1224 Blast hits to 1224 proteins in 176 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 580%3B Fungi - 72%3B Plants - 352%3B Viruses - 38%3B Other Eukaryotes - 182 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT4G22250 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G03965.1)%3B Has 910 Blast hits to 910 proteins in 159 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 334%3B Fungi - 67%3B Plants - 314%3B Viruses - 43%3B Other Eukaryotes - 152 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT1G62370 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G03965.1)%3B Has 610 Blast hits to 610 proteins in 109 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 219%3B Fungi - 27%3B Plants - 270%3B Viruses - 11%3B Other Eukaryotes - 83 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC09g51147 ChrC09 + View
Brassica carinata BcaB01g02609 ChrB01 - View
Brassica carinata BcaNung01702 Contig593 + View
Brassica carinata BcaC02g10473 ChrC02 - View
Brassica carinata BcaNung03750 Contig1284 + View
Brassica carinata BcaC06g31897 ChrC06 + View
Brassica napus A03p67880 A03 + View
Brassica napus C04p28440 C04 + View
Brassica napus A03p53380 A03 - View
Brassica napus C07p51690 C07 - View
Brassica napus A03p29870 A03 + View
Brassica oleracea BolC4t24391H C4 + View
Brassica oleracea BolC3t15924H C3 + View
Brassica oleracea BolC1t01600H C1 - View
Brassica rapa BraA03t14405Z A03 - View
Brassica rapa BraA03t12177Z A03 + View
Brassica rapa BraA01t01305Z A01 - View
Beta vulgaris EL10Ac8g20137 PF13920 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) Chr8_EL10_PGA_scaffold4 + View
Cannabis sativa CANSAT56G1550 NC_044371.1 - View
Cicer arietinum L. Ca_21058_v3 Ca_LG7_v3 - View
Cicer arietinum L. Ca_00700_v3 Ca_LG1_v3 + View
Corylus avellana Haze_06885 Protein of unknown function 2 + View
Corylus avellana Haze_12764 Protein of unknown function 5 - View
Coffea canephora Cc09_g01120 Putative RING/U-box superfamily protein chr9 - View
Citrus clementina Ciclev10017636m.g scaffold_2 + View
Citrus clementina Ciclev10016774m.g scaffold_2 + View
Carpinus fangiana Cfa014316 Cfa06 - View
Carpinus fangiana Cfa000139 Cfa01 - View
Cardamine hirsuta CARHR229140 RING/U-box superfamily protein Chr7 - View
Cardamine hirsuta CARHR049550 RING/U-box superfamily protein Chr2 - View
Cardamine hirsuta CARHR253430 RING/U-box superfamily protein Chr8 - View
Carya illinoinensis CiPaw.03G154900 KOG4172 - Predicted E3 ubiquitin ligase Chr03 - View
Carya illinoinensis CiPaw.10G075300 PTHR12183//PTHR12183:SF11 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN // C3HC4 TYPE RING-FINGER PROTEIN-RELATED Chr10 + View
Citrullus lanatus ClCG01G021600 RING/U-box superfamily protein LENGTH=214 CG_Chr01 - View
Cucumis melo MELO3C007424.2 Zinc finger, RING-type chr08 + View
Corchorus olitorius COL.COLO4_31845 Zinc finger%2C RING-type AWUE01020876.1 + View
Carica papaya Cpa.g.sc132.26 supercontig_132 + View
Chenopodium quinoa AUR62012764 Protein of unknown function C_Quinoa_Scaffold_2715 + View
Chenopodium quinoa AUR62021893 Protein of unknown function C_Quinoa_Scaffold_1862 - View
Capsella rubella Carub.0007s1907 PTHR12183 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN scaffold_7 + View
Capsella rubella Carub.0006s3204 PTHR12183 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN scaffold_6 + View
Capsella rubella Carub.0002s0261 PTHR12183 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN scaffold_2 - View
Cucumis sativus L. CsaV3_6G048640 Zinc finger, RING-type chr6 - View
Daucus carota DCAR_002207 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv20114 GWHABJS00000020 + View
Davidia involucrata Dinv39751 GWHABJS00000001 + View
Durio zibethinus Duzib192G0402 NW_019168037.1 - View
Durio zibethinus Duzib235G0464 NW_019167982.1 + View
Durio zibethinus Duzib211G0626 NW_019168049.1 - View
Durio zibethinus Duzib138G0709 NW_019167893.1 - View
Eucalyptus grandis Eucgr.E03980 Chr05 + View
Erythranthe guttata Migut.M01364 scaffold_13 - View
Eutrema salsugineum Thhalv10026221m.g PTHR12183 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN scaffold_1 + View
Eutrema salsugineum Thhalv10023694m.g PTHR12183 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN scaffold_8 - View
Eutrema salsugineum Thhalv10029329m.g PTHR12183 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN scaffold_3 - View
Fragaria x ananassa FAN21G3527 PF13920 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) Fvb3-2 + View
Fragaria x ananassa FAN25G3753 PTHR12183:SF11 - C3HC4 TYPE RING-FINGER PROTEIN-RELATED Fvb3-1 + View
Fragaria vesca FvH4_3g01290 PF13920 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) Fvb3 - View
Gossypium hirsutum Gohir.A11G152700 PF13920 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) A11 - View
Gossypium hirsutum Gohir.D11G159600 PF13920 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) D11 - View
Gossypium hirsutum Gohir.A05G174000 KOG4172 - Predicted E3 ubiquitin ligase A05 - View
Gossypium hirsutum Gohir.D06G158300 PTHR12183:SF11 - C3HC4 TYPE RING-FINGER PROTEIN-RELATED D06 + View
Gossypium hirsutum Gohir.D05G177000 KOG4172 - Predicted E3 ubiquitin ligase D05 - View
Gossypium hirsutum Gohir.A06G152000 A06 + View
Glycine max Glyma.15G112600 PTHR12183 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN Gm15 + View
Glycine max Glyma.09G008200 PTHR12183 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN Gm09 + View
Glycine max Glyma.07G264100 PTHR12183 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN Gm07 + View
Glycine max Glyma.17G009900 PTHR12183 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN Gm17 - View
Gossypium raimondii Gorai.010G184800 Chr10 + View
Gossypium raimondii Gorai.009G182400 Chr09 - View
Gossypium raimondii Gorai.007G170200 Chr07 - View
Helianthus annuus HanXRQChr16g0516871 Putative zinc finger, RING/FYVE/PHD-type HanXRQChr16 - View
Hydrangea macrophylla Hma1.2p1_0298F.1_g117420 Hma1.2p1_0298F.1 - View
Lupinus albus Lalb_Chr18g0056821 KOG4172 - Predicted E3 ubiquitin ligase Lalb_Chr18 + View
Lupinus albus Lalb_Chr15g0087831 KOG4172 - Predicted E3 ubiquitin ligase Lalb_Chr15 + View
Lotus japonicus Lj4g0027518 KOG4172 - Predicted E3 ubiquitin ligase chr4 + View
Lotus japonicus Lj6g0015850 KOG4172 - Predicted E3 ubiquitin ligase chr6 + View
Lonicera japonica Lj1P781T37 GWHAAZE00000001 + View
Lonicera japonica Lj1E1237T0 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_7_14220 KOG0320//KOG4172 - Predicted E3 ubiquitin ligase // Predicted E3 ubiquitin ligase Lsat_1_v8_lg_7 - View
Lactuca sativa Lsat_1_v5_gn_4_63001 Lsat_1_v8_lg_4 + View
Magnolia biondii MBI19_g03674_MAGBIO AED:0.12 Chr19 + View
Malus domestica MD05G1353900 RING/U-box superfamily protein Chr05 + View
Malus domestica MD10G1328000 RING/U-box superfamily protein Chr10 + View
Manihot esculenta Manes.17G022526 Chromosome17 - View
Manihot esculenta Manes.12G069400 Chromosome12 - View
Manihot esculenta Manes.13G065850 Chromosome13 - View
Medicago truncatula Medtr4g132760 zinc finger, C3HC4 type (RING finger) protein chr4 + View
Medicago truncatula Medtr2g025080 RING/U-box protein, putative chr2 + View
Nelumbo nucifera Nn1g03375 chr1 - View
Nelumbo nucifera Nn1g07302 chr1 + View
Olea europaea Oeu003161.1 chr6 + View
Olea europaea Oeu051876.1 scaffold601 - View
Olea europaea Oeu007157.1 chr13 - View
Punica granatum PGR042G3932 NC_045130.1 - View
Punica granatum PGR042G2269 NC_045130.1 + View
Prunus persica Prupe.4G013900 PTHR12183 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN Pp04 - View
Pisum sativum Psat1g177600 Zinc finger + C3HC4 type (RING finger) chr1LG6 - View
Papaver somniferum PSO832G1511 NC_039367.1 - View
Papaver somniferum PSO541G3517 NC_039363.1 - View
Papaver somniferum PSO675G9389 NC_039358.1 + View
Papaver somniferum PSO210G6144 NC_039359.1 - View
Populus trichocarpa Potri.002G224200 KOG4172 - Predicted E3 ubiquitin ligase Chr02 - View
Populus trichocarpa Potri.011G020800 Chr11 + View
Populus trichocarpa Potri.004G003101 KOG4172 - Predicted E3 ubiquitin ligase Chr04 - View
Populus trichocarpa Potri.014G158900 KOG4172 - Predicted E3 ubiquitin ligase Chr14 + View
Phaseolus vulgaris Phvul.006G145000 PTHR12183 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN Chr06 - View
Phaseolus vulgaris Phvul.003G082200 PTHR12183 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN Chr03 + View
Quercus lobata QL03p008070 3 + View
Quercus lobata QL05p070193 5 - View
Rosa chinensis RcHm_v2.0_Chr5g0001841 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim13G0149500 chr13 - View
Striga asiatica SGA_v2.0_scaffold7G03788 scaffold7 + View
Salix brachista Sabra04G0001700 GWHAAZH00000004 - View
Salix brachista Sabra14G0120700 GWHAAZH00000014 + View
Sechium edule Sed0020262 LG10 - View
Solanum lycopersicum Solyc02g081180.2 RING/U-box superfamily protein (AHRD V3.3 *** Q5XV87_ARATH) SL4.0ch02 + View
Schrenkiella parvula Sp7g20370 ch7-4 - View
Schrenkiella parvula Sp6g04740 KOG4172 - Predicted E3 ubiquitin ligase ch6-1 - View
Schrenkiella parvula Sp2g02230 KOG4172 - Predicted E3 ubiquitin ligase ch2-1 - View
Solanum pennellii Sopen02g025820 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400016713 Zinc finger, RING-type ST4.03ch02 + View
Trochodendron aralioides TAR626G0005 group3 - View
Trochodendron aralioides TAR629G0424 group0 - View
Theobroma cacao Thecc.06G229600 RING/U-box superfamily protein Chromosome_6 + View
Theobroma cacao Thecc.01G182500 Ubiquitin-protein ligase Chromosome_1 + View
Tarenaya hassleriana THA.LOC104813470 death-associated inhibitor of apoptosis 1 NW_010960187.1 - View
Tarenaya hassleriana THA.LOC104818608 uncharacterized protein LOC104818608 NW_010960187.1 - View
Tarenaya hassleriana THA.LOC104809475 uncharacterized protein LOC104809475 NW_010965019.1 - View
Tripterygium wilfordii TWI18G0363 NC_052241.1 - View
Tripterygium wilfordii TWI63G1699 NC_052240.1 - View
Vaccinium macrocarpon vmacro03659 Protein of unknown function chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G2300 CM024074.1 - View
Vigna mungo VMungo0540G0409 CM024075.1 + View
Vitis vinifera GSVIVG01030507001 chr12 + View