Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G3630 LG-2 - View
Acer truncatum Atru.chr8.809 chr8 - View
Actinidia chinensis Actinidia18122 Lachesis_group11 - View
Actinidia chinensis Actinidia36307 Lachesis_group4 - View
Actinidia chinensis Actinidia16613 Lachesis_group4 + View
Actinidia chinensis Actinidia14847 Lachesis_group14 - View
Arabidopsis lyrata AL2G25770 scaffold_2 - View
Arabidopsis lyrata AL2G27760 scaffold_2 - View
Avicennia marina MSTRG.2940 ScioBoG_102835_HRSCAF_103059 + View
Avicennia marina MSTRG.2265 ScioBoG_102834_HRSCAF_103055 + View
Avicennia marina MSTRG.13501 ScioBoG_18778_HRSCAF_18863 - View
Avicennia marina MSTRG.23822 ScioBoG_3895_HRSCAF_3912 + View
Avicennia marina MSTRG.15416 ScioBoG_19538_HRSCAF_19626 + View
Amaranthus hybridus Ah.10g037510 Transcription factor TCP12 (Protein BRANCHED 2) AmaHy_arrow1_Scaffold_10 - View
Aquilegia oxysepala Aqoxy3G00387 CHR03 - View
Aquilegia oxysepala Aqoxy3G03902 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5LBE6G PTHR31072//PTHR31072:SF6 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP18 arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.47Q1NW PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1 arahy.Tifrunner.gnm1.Arahy.04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q1RL33 PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1 arahy.Tifrunner.gnm1.Arahy.14 - View
Arabidopsis thaliana AT1G67260 TCP family transcription factor Encodes protein with TCP (TB1%2CCYC%2CPCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis%2C there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA. TCP1%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C TCP (InterPro:IPR005333)%2C CYC/TB1%2C R domain (InterPro:IPR017888)%2C Transcription factor TCP subgroup (InterPro:IPR017887)%3B BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1)%3B Has 1624 Blast hits to 1624 proteins in 376 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 1618%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink). TCP1%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: flower development%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: floral meristem%3B EXPRESSED DURING: 1 floral meristem visible%2C 2 floral meristem notched%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C TCP (InterPro:IPR005333)%2C CYC/TB1%2C R domain (InterPro:IPR017888)%2C Transcription factor TCP subgroup (InterPro:IPR017887)%3B BEST Arabidopsis thaliana protein match is: TCP domain protein 12 (TAIR:AT1G68800.1)%3B Has 1627 Blast hits to 1627 proteins in 374 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 1623%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G68800 TCP domain protein 12 Encodes a TCP transcription factor%2C closely related to teosinte branched1%2C arrests axillary bud development and prevents axillary bud outgrowth. Transcription level and mutant phenotype are weaker than its homolog BRC1 (At3G18550). TCP domain protein 12 (TCP12)%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C TCP (InterPro:IPR005333)%2C CYC/TB1%2C R domain (InterPro:IPR017888)%2C Transcription factor TCP subgroup (InterPro:IPR017887)%3B BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G67260.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC03g14991 ChrC03 - View
Brassica carinata BcaC03g14821 ChrC03 - View
Brassica carinata BcaB05g24253 ChrB05 - View
Brassica napus A02p15360 A02 - View
Brassica napus A02p14110 A02 - View
Brassica napus C02p22720 C02 - View
Brassica napus C06p43010 C06 + View
Brassica oleracea BolC2t08425H C2 - View
Brassica oleracea BolC6t39134H C6 - View
Brassica rapa BraA02t06474Z A02 - View
Beta vulgaris EL10Ac2g04612 PTHR31072:SF22 - TRANSCRIPTION FACTOR TCP12 Chr2_EL10_PGA_scaffold6 + View
Capsicum annuum CAN.G184.85 PGAv.1.6.scaffold184 - View
Capsicum annuum CAN.G497.4 PGAv.1.6.scaffold497 + View
Cannabis sativa CANSAT64G1749 NC_044379.1 + View
Cicer arietinum L. Ca_13740_v3 Ca_LG5_v3 + View
Corylus avellana Haze_14118 Similar to TCP1: Transcription factor TCP1 (Arabidopsis thaliana OX%3D3702) 5 - View
Coffea canephora Cc07_g05080 Putative Transcription factor CYCLOIDEA (Fragment) chr7 - View
Citrus clementina Ciclev10033382m.g scaffold_4 + View
Carpinus fangiana Cfa018635 Cfa07 + View
Carpinus fangiana Cfa007952 Cfa03 + View
Cardamine hirsuta CARHR061630 Cycloidea-like protein group 1A Chr2 - View
Cardamine hirsuta CARHR059730 Cycloidea-like protein group 1A Chr2 - View
Carya illinoinensis CiPaw.03G059100 PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1 Chr03 - View
Citrullus lanatus ClCG05G012030 CYCLOIDEA-like group 1B protein CG_Chr05 - View
Citrullus lanatus ClCG05G023050 Transcription factor CYCLOIDEA CG_Chr05 + View
Cucumis melo MELO3C023772.2 Cycloidea-like protein group 1A chr06 + View
Cucumis melo MELO3C012212.2 transcription factor TCP12-like chr10 + View
Carica papaya Cpa.g.sc179.29 supercontig_179 + View
Capsella rubella Carub.0002s1537 scaffold_2 - View
Capsella rubella Carub.0002s1353 PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1 scaffold_2 - View
Cucumis sativus L. CsaV3_5G039160 Cycloidea-like protein group 1A chr5 + View
Cucumis sativus L. CsaV3_5G033950 Cycloidea-like protein group 1A chr5 - View
Daucus carota DCAR_026267 hypothetical protein DCARv2_Chr7 + View
Daucus carota DCAR_010972 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_023690 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv16511 GWHABJS00000008 + View
Davidia involucrata Dinv38589 GWHABJS00000019 - View
Davidia involucrata Dinv33927 GWHABJS00000014 - View
Davidia involucrata Dinv34853 GWHABJS00000012 + View
Durio zibethinus Duzib138G1843 NW_019167893.1 - View
Durio zibethinus Duzib251G0154 NW_019167971.1 + View
Erigeron canadensis ECA233G4981 Conyza_canadensis_scaffold:1 - View
Erigeron canadensis ECA232G3102 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.J01466 Chr10 - View
Eucalyptus grandis Eucgr.G02354 Chr07 + View
Erythranthe guttata Migut.K00858 scaffold_11 + View
Erythranthe guttata Migut.H00528 scaffold_8 + View
Erythranthe guttata Migut.E00294 scaffold_5 - View
Eutrema salsugineum Thhalv10018773m.g PTHR31072:SF22 - TRANSCRIPTION FACTOR TCP12 scaffold_9 + View
Eutrema salsugineum Thhalv10019499m.g PTHR31072:SF18 - TRANSCRIPTION FACTOR TCP1 scaffold_9 - View
Fragaria x ananassa FAN14G0133 PTHR31072:SF18 - TRANSCRIPTION FACTOR TCP1 Fvb6-1 - View
Fragaria x ananassa FAN07G0812 PTHR31072:SF22 - TRANSCRIPTION FACTOR TCP12 Fvb4-4 - View
Fragaria x ananassa FAN09G2730 PTHR31072//PTHR31072:SF6 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP18 Fvb6-2 - View
Fragaria x ananassa FAN22G1545 PTHR31072:SF22 - TRANSCRIPTION FACTOR TCP12 Fvb4-1 + View
Fragaria vesca FvH4_4g28170 PTHR31072:SF22 - TRANSCRIPTION FACTOR TCP12 Fvb4 + View
Fragaria vesca FvH4_6g45410 PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1 Fvb6 + View
Gossypium hirsutum Gohir.D07G179400 PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1 D07 - View
Glycine max Glyma.18G280700 PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1 Gm18 - View
Glycine max Glyma.19G044400 PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1 Gm19 - View
Glycine max Glyma.17G121500 PTHR31072//PTHR31072:SF6 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP18 Gm17 + View
Glycine max Glyma.13G047400 PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1 Gm13 + View
Glycine max Glyma.08G256400 PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1 Gm08 - View
Gossypium raimondii Gorai.001G200400 Chr01 - View
Hydrangea macrophylla Hma1.2p1_0550F.1_g177210 Hma1.2p1_0550F.1 - View
Lupinus albus Lalb_Chr17g0336531 PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1 Lalb_Chr17 + View
Lupinus albus Lalb_Chr10g0092271 PTHR31072:SF18 - TRANSCRIPTION FACTOR TCP1 Lalb_Chr10 + View
Lupinus albus Lalb_Chr21g0317931 PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1 Lalb_Chr21 + View
Lupinus albus Lalb_Chr02g0158341 PTHR31072:SF18 - TRANSCRIPTION FACTOR TCP1 Lalb_Chr02 + View
Lotus japonicus Lj1g0012165 PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1 chr1 + View
Lotus japonicus Lj4g0020267 PTHR31072:SF6 - TRANSCRIPTION FACTOR TCP18 chr4 + View
Lotus japonicus Lj2g0018524 PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1 chr2 + View
Lonicera japonica Lj4C131T10 GWHAAZE00000004 - View
Lonicera japonica Lj7C10T1 GWHAAZE00000007 - View
Lonicera japonica Lj5P145T35 GWHAAZE00000005 - View
Lonicera japonica Lj6P767T18 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_3_94461 PTHR31072:SF18 - TRANSCRIPTION FACTOR TCP1 Lsat_1_v8_lg_3 + View
Lactuca sativa Lsat_1_v5_gn_8_37420 Lsat_1_v8_lg_8 - View
Malus domestica MD17G1073600 TCP family transcription factor Chr17 - View
Malus domestica MD09G1083300 Chr09 - View
Malus domestica MD14G1221800 TCP family transcription factor Chr14 - View
Malus domestica MD13G1047200 TCP domain protein 12 Chr13 + View
Malus domestica MD16G1049000 TCP domain protein 12 Chr16 + View
Manihot esculenta Manes.06G072800 Chromosome06 + View
Manihot esculenta Manes.02G066400 Chromosome02 - View
Manihot esculenta Manes.14G097000 Chromosome14 - View
Medicago truncatula Medtr7g018500 TCP family transcription factor chr7 + View
Medicago truncatula Medtr6g017055 TCP family transcription factor chr6 + View
Petunia axillaris Peaxi162Scf00479g00005 Transcription factor CYCLOIDEA Peaxi162Scf00479 + View
Punica granatum PGR119G0221 NC_045132.1 + View
Punica granatum PGR042G2734 NC_045130.1 + View
Punica granatum PGR004G1057 NC_045131.1 + View
Prunus persica Prupe.1G304700 PTHR31072:SF22 - TRANSCRIPTION FACTOR TCP12 Pp01 - View
Prunus persica Prupe.3G240200 PTHR31072:SF18 - TRANSCRIPTION FACTOR TCP1 Pp03 + View
Pisum sativum Psat3g190960 TCP family transcription factor chr3LG5 + View
Pisum sativum Psat1g061800 TCP family transcription factor chr1LG6 - View
Papaver somniferum PSO478G2908 NC_039361.1 + View
Papaver somniferum PSO782G4034 NC_039365.1 - View
Populus trichocarpa Potri.017G112000 PTHR31072//PTHR31072:SF18 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP1 Chr17 - View
Populus trichocarpa Potri.010G130200 PTHR31072//PTHR31072:SF22 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP12 Chr10 + View
Populus trichocarpa Potri.008G115800 PTHR31072//PTHR31072:SF22 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR TCP12 Chr08 - View
Phaseolus vulgaris Phvul.008G020400 PTHR31072:SF18 - TRANSCRIPTION FACTOR TCP1 Chr08 + View
Quercus lobata QL02p052869 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr4g0435921 RcHm_v2.0_Chr4 + View
Rosa chinensis RcHm_v2.0_Chr2g0163221 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim10G0063600 chr10 + View
Rhododendron simsii Rhsim09G0112900 chr09 + View
Striga asiatica SGA_v2.0_scaffold204G41648 scaffold204 - View
Striga asiatica SGA_v2.0_scaffold14G06816 scaffold14 - View
Salix brachista Sabra17G0092900 GWHAAZH00000017 - View
Salix brachista Sabra10G0099300 GWHAAZH00000010 + View
Salix brachista Sabra08G0087700 GWHAAZH00000008 - View
Simmondsia chinensis Sc11g0008160 GWHAASQ00000011 - View
Simmondsia chinensis Sc11g0003060 GWHAASQ00000011 - View
Sechium edule Sed0022485 LG06 + View
Sechium edule Sed0010372 LG11 + View
Sechium edule Sed0024971 LG03 + View
Solanum lycopersicum Solyc03g045030.2 TCP transcription factor 26 SL4.0ch03 - View
Solanum lycopersicum Solyc04g006980.1 TCP transcription factor 22 SL4.0ch04 - View
Solanum lycopersicum Solyc02g089830.2 TCP transcription factor 7 SL4.0ch02 - View
Schrenkiella parvula Sp5g22190 PTHR31072:SF18 - TRANSCRIPTION FACTOR TCP1 ch5-6 - View
Solanum pennellii Sopen02g034520 Encodes protein with TCP (TB1,CYC,PCF) domain which is likely to be involved in DNA binding and protein-protein interactions. Based on genome analysis, there is a 9-member gene family that possesses this domain in Arabidopsis. Orthologue of Antirrhinum gene CYCLOIDEA. | TCP1 | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: flower development | LOCATED IN: cellular_component unknown | EXPRESSED IN: floral meristem | EXPRESSED DURING: 1 floral meristem visible, 2 floral meristem notched | CONTAINS InterPro DOMAIN/s: Transcription factor, TCP , CYC/TB1, R domain , Transcription factor TCP subgroup | BEST Arabidopsis thaliana protein match is: TCP domain protein 12 Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400010045 TCP protein ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400000823 TCP transcription factor ST4.03ch05 - View
Solanum tuberosum PGSC0003DMG400003362 DICHOTOMA ST4.03ch03 - View
Selenicereus undatus Hund13736 Scaffold_33679 + View
Trochodendron aralioides TAR622G0099 group8 + View
Trochodendron aralioides TAR371G0428 group13 + View
Trochodendron aralioides TAR629G0148 group0 - View
Trochodendron aralioides TAR374G1647 group12 - View
Theobroma cacao Thecc.04G138700 LST1 Chromosome_4 + View
Theobroma cacao Thecc.02G361900 Chromosome_2 + View
Tarenaya hassleriana THA.LOC104805551 transcription factor TCP1 isoform X1 NW_010961290.1 + View
Tarenaya hassleriana THA.LOC104823871 transcription factor TCP1-like isoform X1 NW_010966881.1 - View
Trifolium pratense TPR.G4513 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI79G0859 NC_052238.1 + View
Tripterygium wilfordii TWI31G0018 NC_052233.1 + View
Vaccinium macrocarpon vmacro10524 Similar to TCP12: Transcription factor TCP12 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0464G1944 CM024077.1 - View
Vigna mungo VMungo1383G2603 CM024070.1 + View
Vitis vinifera GSVIVG01008234001 chr17 + View
Vitis vinifera GSVIVG01011962001 chr1 - View
Vitis vinifera GSVIVG01036449001 chr14 + View