Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0032021 PREDICTED: pentatricopeptide repeat-containing protein At2g17033 [Vitis vinifera] Contig379 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G14230 LG-8 + View
Acer truncatum Atru.BG.70.p chr5 + View
Actinidia chinensis Actinidia18031 Lachesis_group12 - View
Arabidopsis lyrata AL3G49850 scaffold_3 + View
Avicennia marina MSTRG.19967 ScioBoG_26180_HRSCAF_26306 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DZVX1N PF01535 - PPR repeat (PPR) arahy.Tifrunner.gnm1.Arahy.19 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DS4D2V PF01535 - PPR repeat (PPR) arahy.Tifrunner.gnm1.Arahy.09 + View
Arabidopsis thaliana AT2G17033 pentatricopeptide (PPR) repeat-containing protein pentatricopeptide (PPR) repeat-containing protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%2C Smr protein/MutS2 C-terminal (InterPro:IPR002625)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G48730.1)%3B Has 2021 Blast hits to 1571 proteins in 89 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 0%3B Plants - 2004%3B Viruses - 0%3B Other Eukaryotes - 15 (source: NCBI BLink). pentatricopeptide (PPR) repeat-containing protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%2C Smr protein/MutS2 C-terminal (InterPro:IPR002625)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G48730.1)%3B Has 2363 Blast hits to 1770 proteins in 90 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 0%3B Plants - 2346%3B Viruses - 0%3B Other Eukaryotes - 15 (source: NCBI BLink). Chr2 + View
Amborella trichopoda ATR0661G309 AmTr_v1.0_scaffold00001 - View
Brassica carinata BcaB08g34688 ChrB08 + View
Brassica carinata BcaC01g02964 ChrC01 - View
Brassica napus C03p57830 C03 + View
Brassica napus A03p46230 A03 + View
Brassica oleracea BolC3t18054H C3 + View
Brassica rapa BraA03t13747Z A03 + View
Cicer arietinum L. Ca_03291_v3 Ca_LG1_v3 - View
Corylus avellana Haze_02090 Similar to At2g17033: Pentatricopeptide repeat-containing protein At2g17033 (Arabidopsis thaliana OX%3D3702) 1 - View
Coffea canephora Cc09_g10390 Pentatricopeptide repeat-containing protein At2g17033 chr9 + View
Citrus clementina Ciclev10028424m.g scaffold_8 - View
Ceratophyllum demersum CDE05G1346 3 + View
Carpinus fangiana Cfa005297 Cfa02 + View
Cardamine hirsuta CARHR107360 Pentatricopeptide repeat-containing protein Chr3 + View
Carya illinoinensis CiPaw.06G119700 PF01535 - PPR repeat (PPR) Chr06 - View
Carica papaya Cpa.g.sc20.124 supercontig_20 + View
Capsella rubella Carub.0003s3096 PF01535 - PPR repeat (PPR) scaffold_3 + View
Davidia involucrata Dinv41907 GWHABJS00000002 + View
Durio zibethinus Duzib052G0076 NW_019167849.1 + View
Erigeron canadensis ECA234G3875 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.I01461 Chr09 + View
Erythranthe guttata Migut.B00046 scaffold_2 - View
Eutrema salsugineum Thhalv10022675m.g PF01535 - PPR repeat (PPR) scaffold_11 - View
Fragaria x ananassa FAN27G0563 PF01535 - PPR repeat (PPR) Fvb2-1 + View
Fragaria x ananassa FAN24G2955 PF01535 - PPR repeat (PPR) Fvb2-2 - View
Fragaria x ananassa FAN20G2719 PF01535 - PPR repeat (PPR) Fvb2-3 - View
Fragaria x ananassa FAN15G3675 Fvb2-4 + View
Fragaria vesca FvH4_2g15760 PF01535 - PPR repeat (PPR) Fvb2 + View
Gossypium hirsutum Gohir.A03G206400 PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) A03 + View
Gossypium hirsutum Gohir.D02G227800 PF01535 - PPR repeat (PPR) D02 + View
Glycine max Glyma.20G105600 PF01535 - PPR repeat (PPR) Gm20 - View
Gossypium raimondii Gorai.005G255600 Chr05 + View
Hydrangea macrophylla Hma1.2p1_0032F.1_g019100 Hma1.2p1_0032F.1 - View
Lupinus albus Lalb_Chr06g0163771 PF01535 - PPR repeat (PPR) Lalb_Chr06 + View
Lotus japonicus Lj5g0013499 PF01535 - PPR repeat (PPR) chr5 - View
Lonicera japonica Lj5A175T99 GWHAAZE00000005 - View
Malus domestica MD10G1129400 pentatricopeptide (PPR) repeat-containing protein Chr10 + View
Manihot esculenta Manes.04G070000 Chromosome04 - View
Medicago truncatula Medtr1g113720 pentatricopeptide (PPR) repeat protein chr1 + View
Petunia axillaris Peaxi162Scf00042g01217 pentatricopeptide (PPR) repeat-containing protein Peaxi162Scf00042 - View
Punica granatum PGR142G2258 NC_045128.1 - View
Prunus persica Prupe.8G170200 PF01535 - PPR repeat (PPR) Pp08 + View
Papaver somniferum PSO675G2411 NC_039358.1 - View
Phaseolus vulgaris Phvul.007G017200 PF01535 - PPR repeat (PPR) Chr07 - View
Quercus lobata QL11p052544 11 + View
Rosa chinensis RcHm_v2.0_Chr6g0279111 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim11G0194300 chr11 + View
Striga asiatica SGA_v2.0_scaffold32G13314 scaffold32 + View
Salvia bowleyana SalBow1G5734 GWHASIU00000001 - View
Salix brachista Sabra09G0107900 GWHAAZH00000009 - View
Solanum lycopersicum Solyc10g055700.2 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2YL01_CAPAN) SL4.0ch10 + View
Solanum tuberosum PGSC0003DMG400018933 Pentatricopeptide repeat-containing protein ST4.03ch10 + View
Theobroma cacao Thecc.02G053600 Pentatricopeptide (PPR) repeat-containing protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104819661 pentatricopeptide repeat-containing protein At2g17033 NW_010966177.1 + View
Tripterygium wilfordii TWI79G1609 NC_052238.1 + View
Vaccinium macrocarpon vmacro02296 Similar to At2g17033: Pentatricopeptide repeat-containing protein At2g17033 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G0114 CM024071.1 + View
Vitis vinifera GSVIVG01023965001 chr3 + View