Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0020646 CCT motif family protein isoform 2 [Theobroma cacao] Chr9 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G3960 LG-5 - View
Acer truncatum Atru.chr4.1926 chr4 + View
Actinidia chinensis Actinidia11370 Lachesis_group21 - View
Actinidia chinensis Actinidia39927 Lachesis_group17 - View
Arabidopsis lyrata AL4G29000 scaffold_4 + View
Avicennia marina MSTRG.9862 ScioBoG_12795_HRSCAF_12848 + View
Amaranthus hybridus Ah.04g155260 AmaHy_arrow1_Scaffold_4 + View
Aquilegia oxysepala Aqoxy5G00151 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EF48U6 PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.22FLX8 PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZRH25X PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.12 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FA5JII PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.19 - View
Arabidopsis thaliana AT1G04500 CCT motif family protein CCT motif family protein%3B CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402)%3B BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2)%3B Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 2%3B Fungi - 2%3B Plants - 1654%3B Viruses - 0%3B Other Eukaryotes - 125 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT2G33350 CCT motif family protein CCT motif family protein%3B CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402)%3B BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT1G04500.1)%3B Has 8037 Blast hits to 5335 proteins in 176 species: Archae - 8%3B Bacteria - 26%3B Metazoa - 23%3B Fungi - 132%3B Plants - 1672%3B Viruses - 0%3B Other Eukaryotes - 6176 (source: NCBI BLink). CCT motif family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%3B CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402)%3B BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT1G04500.1)%3B Has 8030 Blast hits to 5339 proteins in 177 species: Archae - 8%3B Bacteria - 27%3B Metazoa - 23%3B Fungi - 136%3B Plants - 1673%3B Viruses - 0%3B Other Eukaryotes - 6163 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB06g28677 ChrB06 + View
Brassica carinata BcaC02g11421 ChrC02 + View
Brassica carinata BcaB02g10553 ChrB02 + View
Brassica napus A04p25660 A04 + View
Brassica napus C04p62810 C04 + View
Brassica napus C04p15740 C04 - View
Brassica napus C05p02670 C05 - View
Brassica napus A05p12170 A05 - View
Brassica napus A10p02920 A10 - View
Brassica oleracea BolC4t27764H C4 + View
Brassica oleracea BolC4t23143H C4 - View
Brassica oleracea BolC5t29048H C5 - View
Brassica rapa BraA05t20161Z A05 - View
Brassica rapa BraA04t18070Z A04 + View
Beta vulgaris EL10Ac3g04948 PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN Chr3_EL10_PGA_scaffold7 + View
Capsicum annuum CAN.G220.76 PGAv.1.6.scaffold220 + View
Cannabis sativa CANSAT78G0790 NC_044376.1 + View
Corylus avellana Haze_11453 Similar to CO3: Zinc finger protein CO3 (Oryza sativa subsp. japonica OX%3D39947) 9 - View
Citrus clementina Ciclev10004980m.g scaffold_9 - View
Cardamine hirsuta CARHR127350 CCT motif-containing protein Chr4 + View
Cardamine hirsuta CARHR003840 CCT motif-containing protein Chr1 - View
Carya illinoinensis CiPaw.01G178700 PTHR31717:SF15 - CCT MOTIF-CONTAINING PROTEIN Chr01 + View
Carya illinoinensis CiPaw.02G107500 PTHR31717:SF15 - CCT MOTIF-CONTAINING PROTEIN Chr02 + View
Citrullus lanatus ClCG06G007250 CCT motif family protein LENGTH=410 CG_Chr06 - View
Cucumis melo MELO3C023041.2 Zinc finger-like protein chr05 - View
Carica papaya Cpa.g.sc44.6 supercontig_44 + View
Chenopodium quinoa AUR62016173 Protein of unknown function C_Quinoa_Scaffold_3256 + View
Capsella rubella Carub.0004s1497 PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN scaffold_4 + View
Cucumis sativus L. CsaV3_2G012450 Zinc finger-like protein chr2 + View
Daucus carota DCAR_030760 hypothetical protein DCARv2_Chr9 - View
Davidia involucrata Dinv29807 GWHABJS00000016 + View
Durio zibethinus Duzib212G0703 NW_019168026.1 + View
Durio zibethinus Duzib151G0926 NW_019167904.1 - View
Erigeron canadensis ECA248G3283 Conyza_canadensis_scaffold:9 + View
Eucalyptus grandis Eucgr.H02941 Chr08 + View
Eucalyptus grandis Eucgr.H00131 Chr08 + View
Erythranthe guttata Migut.G00546 scaffold_7 - View
Erythranthe guttata Migut.N00298 scaffold_14 - View
Eutrema salsugineum Thhalv10007843m.g PTHR31717:SF15 - CCT MOTIF-CONTAINING PROTEIN scaffold_5 + View
Eutrema salsugineum Thhalv10016744m.g PTHR31717:SF15 - CCT MOTIF-CONTAINING PROTEIN scaffold_10 + View
Fragaria x ananassa FAN17G1575 PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN Fvb4-2 + View
Fragaria x ananassa FAN22G1526 PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN Fvb4-1 - View
Fragaria vesca FvH4_4g04500 PTHR31717:SF15 - CCT MOTIF-CONTAINING PROTEIN Fvb4 - View
Gossypium hirsutum Gohir.A10G109100 PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN A10 + View
Gossypium hirsutum Gohir.A02G042600 PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN A02 - View
Gossypium hirsutum Gohir.D10G158700 PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN D10 + View
Gossypium hirsutum Gohir.D02G048200 PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN D02 - View
Glycine max Glyma.20G200400 PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN Gm20 + View
Glycine max Glyma.20G085100 PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN Gm20 + View
Glycine max Glyma.10G190300 PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN Gm10 - View
Gossypium raimondii Gorai.011G178300 Chr11 + View
Gossypium raimondii Gorai.005G053500 Chr05 - View
Helianthus annuus HanXRQChr01g0022961 Putative CCT domain HanXRQChr01 + View
Helianthus annuus HanXRQChr02g0059301 Probable CCT motif family protein HanXRQChr02 + View
Lupinus albus Lalb_Chr06g0169501 PTHR31717:SF15 - CCT MOTIF-CONTAINING PROTEIN Lalb_Chr06 - View
Lotus japonicus Lj6g0022305 PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN chr6 + View
Lotus japonicus Lj5g0023532 PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN chr5 + View
Lonicera japonica Lj6C622T6 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_6_66601 PTHR31717:SF15 - CCT MOTIF-CONTAINING PROTEIN Lsat_1_v8_lg_6 - View
Lactuca sativa Lsat_1_v5_gn_2_40740 PTHR31717:SF15 - CCT MOTIF-CONTAINING PROTEIN Lsat_1_v8_lg_2 + View
Magnolia biondii MBI07_g12939_MAGBIO AED:0.03 Chr07 + View
Malus domestica MD13G1220700 CCT motif family protein Chr13 - View
Malus domestica MD16G1225800 CCT motif family protein Chr16 - View
Manihot esculenta Manes.15G045300 Chromosome15 - View
Manihot esculenta Manes.03G159600 Chromosome03 + View
Medicago truncatula Medtr1g073350 CCT motif protein chr1 + View
Nelumbo nucifera Nn3g19766 chr3 - View
Nelumbo nucifera Nn1g02951 chr1 - View
Olea europaea Oeu011225.1 chr22 + View
Oryza sativa ssp. japonica Os10g0466500 CCT domain containing protein. Similar to CCT motif family protein. chr10 + View
Oryza sativa ssp. japonica Os03g0139500 Similar to CONSTANS-like protein CO9 (Fragment). chr03 - View
Petunia axillaris Peaxi162Scf00033g00307 CCT motif family protein Peaxi162Scf00033 - View
Punica granatum PGR004G2664 NC_045131.1 - View
Punica granatum PGR031G3509 NC_045127.1 + View
Prunus persica Prupe.1G047400 Pp01 - View
Populus trichocarpa Potri.010G066100 PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN Chr10 + View
Populus trichocarpa Potri.008G171500 PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN Chr08 - View
Phaseolus vulgaris Phvul.007G270600 PTHR31717:SF15 - CCT MOTIF-CONTAINING PROTEIN Chr07 + View
Quercus lobata QL06p020888 6 - View
Rosa chinensis RcHm_v2.0_Chr4g0395281 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim04G0172700 chr04 + View
Rhododendron simsii Rhsim02G0043400 chr02 - View
Salvia bowleyana SalBow3G0311 GWHASIU00000006 + View
Salix brachista Sabra10G0041100 GWHAAZH00000010 - View
Simmondsia chinensis Sc19g0003340 GWHAASQ00000019 - View
Sechium edule Sed0023179 LG04 - View
Solanum lycopersicum Solyc09g090650.3 CCT motif family protein (AHRD V3.3 *** A0A2U1QLU6_ARTAN) SL4.0ch09 - View
Schrenkiella parvula Sp4g15660 PTHR31717:SF15 - CCT MOTIF-CONTAINING PROTEIN ch4-6 + View
Schrenkiella parvula Sp1g03330 PTHR31717//PTHR31717:SF15 - FAMILY NOT NAMED // CCT MOTIF-CONTAINING PROTEIN ch1-1 - View
Solanum pennellii Sopen09g033590 CCT motif family protein | CONTAINS InterPro DOMAIN/s: CCT domain | BEST Arabidopsis thaliana protein match is: CCT motif family protein Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400017148 Zinc finger ST4.03ch09 - View
Trochodendron aralioides TAR633G1858 group2 + View
Theobroma cacao Thecc.04G263300 CCT motif family protein Chromosome_4 - View
Tarenaya hassleriana THA.LOC104801068 uncharacterized protein LOC104801068 isoform X1 NW_010969548.1 + View
Tarenaya hassleriana THA.LOC104816005 uncharacterized protein LOC104816005 NW_010965696.1 - View
Tarenaya hassleriana THA.LOC104826094 serine/threonine-protein kinase pakE-like isoform X1 NW_010967707.1 - View
Trifolium pratense TPR.G23980 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI73G0954 NC_052232.1 - View
Tripterygium wilfordii TWI09G1141 NC_052245.1 + View
Vaccinium macrocarpon vmacro08551 Similar to CO3: Zinc finger protein CO3 (Oryza sativa subsp. japonica OX%3D39947) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro15475 Similar to COL4: Zinc finger protein CONSTANS-LIKE 4 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G0467 CM024071.1 - View
Vigna mungo VMungo0720G0889 CM024071.1 - View
Vanilla planifolia HPP92_008532 CCT motif family protein *** CM028153.1 + View
Vitis vinifera GSVIVG01027910001 chr5 - View
Zea mays Zm00001eb046390 Zm00001e004626 CCT motif family protein 1 + View