Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G1270 LG-3 - View
Arabidopsis lyrata AL4G38780 scaffold_4 + View
Avicennia marina MSTRG.19772 ScioBoG_25048_HRSCAF_25167 + View
Arabidopsis thaliana AT2G40830 RING-H2 finger C1A Encodes a putative RING-H2 finger protein RHC1a. RING-H2 finger C1A (RHC1A)%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: cell wall%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G56580.3)%3B Has 10447 Blast hits to 10319 proteins in 284 species: Archae - 0%3B Bacteria - 14%3B Metazoa - 2825%3B Fungi - 987%3B Plants - 5086%3B Viruses - 20%3B Other Eukaryotes - 1515 (source: NCBI BLink). RING-H2 finger C1A (RHC1A)%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: cell wall%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G56580.3)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB01g03510 ChrB01 - View
Brassica carinata BcaC01g05373 ChrC01 - View
Brassica napus C03p27250 C03 + View
Brassica oleracea BolC3t15107H C3 + View
Corylus avellana Haze_20290 Similar to RHC1A: Probable E3 ubiquitin-protein ligase RHC1A (Arabidopsis thaliana OX%3D3702) 10 - View
Carpinus fangiana Cfa019949 Cfa08 + View
Cardamine hirsuta CARHR135950 RING/U-box superfamily protein Chr4 + View
Carya illinoinensis CiPaw.09G052300 PTHR22763//PTHR22763:SF44 - RING ZINC FINGER PROTEIN // E3 UBIQUITIN LIGASE Chr09 - View
Capsella rubella Carub.0004s2315 PTHR22763:SF44 - E3 UBIQUITIN LIGASE scaffold_4 + View
Daucus carota DCAR_020606 hypothetical protein DCARv2_Chr6 + View
Erythranthe guttata Migut.J01550 scaffold_10 + View
Eutrema salsugineum Thhalv10016932m.g PTHR22763:SF44 - E3 UBIQUITIN LIGASE scaffold_10 + View
Lupinus albus Lalb_Chr17g0347721 PTHR22763//PTHR22763:SF24 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr17 + View
Lonicera japonica Lj2P826T12 GWHAAZE00000002 - View
Lonicera japonica Lj1E1080T0 GWHAAZE00000001 + View
Nelumbo nucifera Nn7g37025 chr7 - View
Olea europaea Oeu060765.1 chr9 + View
Punica granatum PGR142G1240 NC_045128.1 - View
Populus trichocarpa Potri.006G032100 PTHR22763:SF44 - E3 UBIQUITIN LIGASE Chr06 - View
Populus trichocarpa Potri.016G029300 PTHR22763:SF44 - E3 UBIQUITIN LIGASE Chr16 - View
Quercus lobata QL07p013851 7 - View
Striga asiatica SGA_v2.0_scaffold106G30549 scaffold106 - View
Salix brachista Sabra16G0033300 GWHAAZH00000016 - View
Salix brachista Sabra06G0021400 GWHAAZH00000006 - View
Schrenkiella parvula Sp4g23160 PTHR22763:SF44 - E3 UBIQUITIN LIGASE ch4-6 + View
Theobroma cacao Thecc.05G119300 RING-H2 finger C1A Chromosome_5 - View
Tripterygium wilfordii TWI74G0677 NC_052234.1 - View
Vaccinium macrocarpon vmacro08974 Similar to RHC1A: Probable E3 ubiquitin-protein ligase RHC1A (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01029854001 chr8 - View