Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0003691 MADS-box transcription factor protein 2 [Camellia sinensis] Chr13 - View
CSS0000974 MADS-box transcription factor protein 1 [Camellia sinensis] Contig509 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr13.1018 chr13 - View
Acer truncatum Atru.chr6.1251 chr6 + View
Acer truncatum Atru.chr3.1252 chr3 - View
Actinidia chinensis Actinidia10277 Lachesis_group26 - View
Actinidia chinensis Actinidia19238 Lachesis_group28 - View
Actinidia chinensis Actinidia01161 Lachesis_group2 + View
Arabidopsis lyrata AL4G12080 scaffold_4 + View
Avicennia marina MSTRG.16616 ScioBoG_19743_HRSCAF_19834 + View
Amaranthus hybridus Ah.01g007440 Protein TRANSPARENT TESTA 16 (Arabidopsis BSISTER MADS-box protein) AmaHy_arrow1_Scaffold_1 - View
Aquilegia oxysepala Aqoxy6G01437 CHR06 - View
Aquilegia oxysepala Aqoxy6G00651 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SGD688 KOG0014 - MADS box transcription factor arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.G922MD PTHR11945:SF179 - MADS-BOX PROTEIN SVP arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6TV8QX PTHR11945:SF179 - MADS-BOX PROTEIN SVP arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UK37ES PTHR11945:SF179 - MADS-BOX PROTEIN SVP arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D3LV4V KOG0014 - MADS box transcription factor arahy.Tifrunner.gnm1.Arahy.13 + View
Arabidopsis thaliana AT2G22540 K-box region and MADS-box transcription factor family protein Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter. SHORT VEGETATIVE PHASE (SVP)%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%2C Transcription factor%2C K-box (InterPro:IPR002487)%3B BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 (TAIR:AT4G24540.1)%3B Has 7469 Blast hits to 7448 proteins in 905 species: Archae - 3%3B Bacteria - 14%3B Metazoa - 824%3B Fungi - 324%3B Plants - 6168%3B Viruses - 0%3B Other Eukaryotes - 136 (source: NCBI BLink). Chr2 + View
Beta vulgaris EL10Ac1g01057 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Chr1_EL10_PGA_scaffold3 - View
Beta vulgaris EL10Ac9g22075 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Chr9_EL10_PGA_scaffold8 - View
Capsicum annuum CAN.G523.13 PGAv.1.6.scaffold523 - View
Cannabis sativa CANSAT54G0156 NC_044375.1 - View
Corylus avellana Haze_10525 Similar to J: MADS-box protein JOINTLESS (Solanum lycopersicum OX%3D4081) 9 - View
Corylus avellana Haze_03866 Similar to J: MADS-box protein JOINTLESS (Solanum lycopersicum OX%3D4081) 2 + View
Citrus clementina Ciclev10002707m.g scaffold_5 - View
Citrus clementina Ciclev10029491m.g scaffold_8 - View
Citrus clementina Ciclev10026457m.g scaffold_7 - View
Carpinus fangiana Cfa013789 Cfa05 + View
Carya illinoinensis CiPaw.07G166000 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Chr07 - View
Carya illinoinensis CiPaw.06G157400 PF00319 - SRF-type transcription factor (DNA-binding and dimerisation domain) (SRF-TF) Chr06 + View
Citrullus lanatus ClCG10G009620 MADS-box transcription factor family protein CG_Chr10 + View
Citrullus lanatus ClCG09G016000 MPF2-like CG_Chr09 - View
Cucumis melo MELO3C018601.2 MADS box protein chr01 - View
Cucumis melo MELO3C003502.2 MADS-box transcription factor chr04 - View
Corchorus olitorius COL.COLO4_32384 Transcription factor%2C K-box AWUE01021110.1 + View
Carica papaya Cpa.g.sc21.11 supercontig_21 + View
Chenopodium quinoa AUR62003658 J: MADS-box protein JOINTLESS C_Quinoa_Scaffold_2370 + View
Chenopodium quinoa AUR62012889 SVP: MADS-box protein SVP C_Quinoa_Scaffold_1040 - View
Capsella rubella Carub.0004s0171 PTHR11945:SF179 - MADS-BOX PROTEIN SVP scaffold_4 + View
Cucumis sativus L. CsaV3_2G030300 MADS-box protein like chr2 - View
Cucumis sativus L. CsaV3_7G006940 MADS box protein chr7 + View
Cucumis sativus L. CsaV3_3G048150 MADS-box transcription factor chr3 + View
Davidia involucrata Dinv13608 GWHABJS00000014 - View
Davidia involucrata Dinv15994 GWHABJS00000002 + View
Davidia involucrata Dinv24150 GWHABJS00000005 - View
Durio zibethinus Duzib187G1592 NW_019167860.1 + View
Durio zibethinus Duzib093G0029 NW_019167937.1 + View
Durio zibethinus Duzib052G1115 NW_019167849.1 + View
Durio zibethinus Duzib248G1604 NW_019168048.1 + View
Durio zibethinus Duzib147G0199 NW_019168470.1 + View
Erigeron canadensis ECA238G2163 Conyza_canadensis_scaffold:6 + View
Fragaria x ananassa FAN20G0976 PTHR11945:SF144 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Fvb2-3 + View
Fragaria x ananassa FAN23G1738 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Fvb1-3 - View
Fragaria vesca FvH4_3g12460 PTHR11945:SF242 - PROTEIN TRANSPARENT TESTA 16 Fvb3 - View
Gossypium hirsutum Gohir.A03G177200 PTHR11945:SF179 - MADS-BOX PROTEIN SVP A03 + View
Gossypium hirsutum Gohir.D12G016900 PTHR11945:SF179 - MADS-BOX PROTEIN SVP D12 + View
Gossypium hirsutum Gohir.A12G017150 PTHR11945:SF172 - MADS-BOX TRANSCRIPTION FACTOR ANR1 A12 + View
Gossypium hirsutum Gohir.D02G200900 PTHR11945:SF179 - MADS-BOX PROTEIN SVP D02 + View
Glycine max Glyma.15G057900 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Gm15 + View
Glycine max Glyma.07G181600 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Gm07 + View
Glycine max Glyma.08G068200 PTHR11945//PTHR11945:SF179 - MADS BOX PROTEIN // MADS-BOX PROTEIN SVP Gm08 - View
Gossypium raimondii Gorai.005G225500 Chr05 + View
Gossypium raimondii Gorai.008G017200 Chr08 + View
Hydrangea macrophylla Hma1.2p1_1093F.1_g256190 Hma1.2p1_1093F.1 + View
Lupinus albus Lalb_Chr04g0252741 PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Lalb_Chr04 - View
Lonicera japonica Lj2A534T39 GWHAAZE00000002 - View
Lonicera japonica Lj4C88G16 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_2_70640 Lsat_1_v8_lg_2 + View
Malus domestica MD01G1038600 K-box region and MADS-box transcription factor family protein Chr01 + View
Malus domestica MD15G1313200 K-box region and MADS-box transcription factor family protein Chr15 - View
Manihot esculenta Manes.10G099000 Chromosome10 - View
Manihot esculenta Manes.07G038600 Chromosome07 + View
Manihot esculenta Manes.12G126800 Chromosome12 - View
Medicago truncatula Medtr5g066180 MADS-box transcription factor chr5 + View
Medicago truncatula Medtr4g093970 MADS-box transcription factor chr4 - View
Nelumbo nucifera Nn1g05562 chr1 + View
Nelumbo nucifera Nn5g29891 chr5 - View
Olea europaea Oeu014193.3 scaffold1561 + View
Petunia axillaris Peaxi162Scf00152g00731 MADS-box transcription factor 27 Peaxi162Scf00152 - View
Petunia axillaris Peaxi162Scf00299g00717 MADS-box transcription factor 47 Peaxi162Scf00299 - View
Prunus persica Prupe.6G199000 Pp06 + View
Prunus persica Prupe.1G531100 PTHR11945:SF179 - MADS-BOX PROTEIN SVP Pp01 + View
Prunus persica Prupe.8G069300 Pp08 + View
Pisum sativum Psat7g100960 MADS domain signature chr7LG7 + View
Populus trichocarpa Potri.007G115000 PTHR11945//PTHR11945:SF236 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Chr07 + View
Phaseolus vulgaris Phvul.002G212450 Chr02 + View
Phaseolus vulgaris Phvul.002G147600 PTHR11945:SF179 - MADS-BOX PROTEIN SVP Chr02 - View
Quercus lobata QL06p035702 6 + View
Quercus lobata QL11p024222 11 + View
Rosa chinensis RcHm_v2.0_Chr2g0111271 RcHm_v2.0_Chr2 - View
Rosa chinensis RcHm_v2.0_Chr6g0269991 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim07G0211700 chr07 + View
Striga asiatica SGA_v2.0_scaffold83G26372 scaffold83 + View
Salvia bowleyana SalBow8G1950 GWHASIU00000004 + View
Salvia bowleyana SalBow6G1714 GWHASIU00000002 + View
Salix brachista Sabra17G0030200 GWHAAZH00000017 - View
Salix brachista Sabra07G0093700 GWHAAZH00000007 + View
Simmondsia chinensis Sc08g0004040 GWHAASQ00000008 + View
Simmondsia chinensis Sc23g0000710 GWHAASQ00000023 + View
Simmondsia chinensis Sc26g0000580 GWHAASQ00000026 + View
Sechium edule Sed0016270 LG10 - View
Sechium edule Sed0011763 LG06 - View
Sechium edule Sed0025303 LG13 + View
Sechium edule Sed0012619 LG03 - View
Solanum lycopersicum Solyc01g105800.4 MADS-box protein JOINTLESS (AHRD V3.3 *** A0A2G3AWN8_CAPCH) SL4.0ch01 + View
Solanum lycopersicum Solyc04g076280.4 MADS-box protein SVP (AHRD V3.3 *** A0A2G3CP45_CAPCH) SL4.0ch04 + View
Schrenkiella parvula Sp4g01590 PTHR11945:SF179 - MADS-BOX PROTEIN SVP ch4-1 + View
Solanum pennellii Sopen01g048260 Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter. | SHORT VEGETATIVE PHASE (SVP) | CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box , Transcription factor, K-box | BEST Arabidopsis thaliana protein match is: AGAMOUS-like 24 Spenn-ch01 + View
Solanum pennellii Sopen10g014750 hypothetical protein Spenn-ch10 + View
Solanum tuberosum PGSC0003DMG400033570 MADS transcriptional factor ST4.03ch01 + View
Trochodendron aralioides TAR376G0963 group14 + View
Trochodendron aralioides TAR628G1136 group5 + View
Trochodendron aralioides TAR381G1243 group11 - View
Trochodendron aralioides TAR625G0300 group4 - View
Theobroma cacao Thecc.02G129600 MIKC mads-box transcription factor Chromosome_2 - View
Theobroma cacao Thecc.08G070300 K-box region and MADS-box transcription factor family protein Chromosome_8 + View
Theobroma cacao Thecc.01G091300 K-box region and MADS-box transcription factor family protein Chromosome_1 - View
Tripterygium wilfordii TWI53G0436 NC_052244.1 + View
Tripterygium wilfordii TWI59G0072 NC_052248.1 + View
Tripterygium wilfordii TWI74G0627 NC_052234.1 - View
Tripterygium wilfordii TWI23G1028 NC_052239.1 + View
Tripterygium wilfordii TWI12G1419 NC_052243.1 + View
Vaccinium macrocarpon vmacro04655 Similar to SVP: MADS-box protein SVP (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro01856 Similar to SVP: MADS-box protein SVP (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0540G0229 CM024075.1 + View
Vitis vinifera GSVIVG01015641001 chr3 - View
Vitis vinifera GSVIVG01009171001 chr18 + View