Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0024447 conserved hypothetical protein [Ricinus communis] Chr2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr13.724 chr13 - View
Acer truncatum Atru.chr5.2655 chr5 + View
Actinidia chinensis Actinidia01095 Lachesis_group26 - View
Actinidia chinensis Actinidia22646 Lachesis_group28 - View
Actinidia chinensis Actinidia16475 Lachesis_group25 - View
Actinidia chinensis Actinidia08286 Lachesis_group27 - View
Actinidia chinensis Actinidia12042 Lachesis_group11 + View
Arabidopsis lyrata AL8G17910 scaffold_8 + View
Arabidopsis lyrata AL8G44240 scaffold_8 + View
Avicennia marina MSTRG.27732 ScioBoG_94932_HRSCAF_95134 - View
Avicennia marina MSTRG.24354 ScioBoG_4088_HRSCAF_4107 + View
Avicennia marina MSTRG.25076 ScioBoG_4119_HRSCAF_4138 + View
Avicennia marina MSTRG.1069 ScioBoG_102833_HRSCAF_103052 + View
Aquilegia oxysepala Aqoxy5G01195 CHR05 + View
Aquilegia oxysepala Aqoxy6G01277 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.S0CDCC PTHR14155//PTHR14155:SF72//PTHR37904 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED // FAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.16 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.81V7JE PTHR14155//PTHR14155:SF72//PTHR37904//PTHR37904:SF1 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED // FAMILY NOT NAMED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.U8FDA3 PF13639 - Ring finger domain (zf-RING_2) arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT5G67120 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC06g34792 ChrC06 - View
Brassica napus A07p16840 A07 + View
Brassica napus C07p24650 C07 + View
Brassica oleracea BolC7t42985H C7 + View
Brassica rapa BraA07t29409Z A07 + View
Beta vulgaris EL10Ac6g15727 PF13639 - Ring finger domain (zf-RING_2) Chr6_EL10_PGA_scaffold0 + View
Beta vulgaris EL10As7g23754 PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Scaffold_0007 - View
Capsicum annuum CAN.G370.45 PGAv.1.6.scaffold370 + View
Cannabis sativa CANSAT25G2748 NC_044370.1 - View
Cicer arietinum L. Ca_24756_v3 Ca_LG8_v3 + View
Cicer arietinum L. Ca_13282_v3 Ca_LG4_v3 + View
Corylus avellana Haze_15378 Similar to HIP1: Probable E3 ubiquitin-protein ligase HIP1 (Oryza sativa subsp. japonica OX%3D39947) 11 + View
Corylus avellana Haze_18037 Similar to RHG1A: Probable E3 ubiquitin-protein ligase RHG1A (Arabidopsis thaliana OX%3D3702) 7 - View
Coffea canephora Cc10_g04640 Putative RING/U-box superfamily protein chr10 - View
Citrus clementina Ciclev10027894m.g scaffold_8 + View
Citrus clementina Ciclev10000459m.g scaffold_5 + View
Carpinus fangiana Cfa004035 Cfa01 - View
Carpinus fangiana Cfa018070 Cfa07 + View
Cardamine hirsuta CARHR181150 RING/U-box superfamily protein Chr6 + View
Cardamine hirsuta CARHR280530 RING/U-box superfamily protein Chr8 + View
Carya illinoinensis CiPaw.06G171600 PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr06 + View
Carya illinoinensis CiPaw.15G054500 K10635 - E3 ubiquitin-protein ligase Arkadia [EC:6.3.2.19] (RNF111) Chr15 + View
Carya illinoinensis CiPaw.02G007700 PTHR22937//PTHR22937:SF55 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr02 + View
Carya illinoinensis CiPaw.16G040500 PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr16 + View
Carya illinoinensis CiPaw.05G008000 PTHR14155//PTHR14155:SF72//PTHR22937//PTHR22937:SF55 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED // RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr05 - View
Carya illinoinensis CiPaw.01G016400 PTHR22937//PTHR22937:SF55 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr01 + View
Citrullus lanatus ClCG08G016100 RING/U-box superfamily protein LENGTH=691 CG_Chr08 - View
Cucumis melo MELO3C010842.2 E3 ubiquitin-protein ligase MBR2 chr03 - View
Corchorus olitorius COL.COLO4_26547 Zinc finger%2C RING-type AWUE01019271.1 - View
Carica papaya Cpa.g.sc21.175 supercontig_21 + View
Carica papaya Cpa.g.sc55.126 supercontig_55 - View
Chenopodium quinoa AUR62010243 HIP1: Probable E3 ubiquitin-protein ligase HIP1 C_Quinoa_Scaffold_1257 - View
Chenopodium quinoa AUR62001912 Protein of unknown function C_Quinoa_Scaffold_4480 + View
Capsella rubella Carub.0008s2739 scaffold_8 + View
Cucumis sativus L. CsaV3_2G026530 E3 ubiquitin-protein ligase MBR2 chr2 + View
Daucus carota DCAR_019437 hypothetical protein DCARv2_Chr5 - View
Daucus carota DCAR_012786 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_022013 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv15731 GWHABJS00000005 - View
Davidia involucrata Dinv35939 GWHABJS00000002 + View
Davidia involucrata Dinv39290 GWHABJS00000011 + View
Davidia involucrata Dinv42168 GWHABJS00000002 + View
Durio zibethinus Duzib187G1450 NW_019167860.1 + View
Durio zibethinus Duzib132G0227 The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons NW_019167915.1 - View
Durio zibethinus Duzib116G0443 NW_019167949.1 - View
Durio zibethinus Duzib093G1398 NW_019167937.1 + View
Durio zibethinus Duzib248G1643 NW_019168048.1 + View
Durio zibethinus Duzib041G0535 NW_019167826.1 - View
Erigeron canadensis ECA236G2033 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA232G0431 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA247G0252 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA234G0549 Conyza_canadensis_scaffold:4 + View
Eucalyptus grandis Eucgr.F00204 Chr06 - View
Eucalyptus grandis Eucgr.F02323 Chr06 - View
Erythranthe guttata Migut.C00560 scaffold_3 + View
Erythranthe guttata Migut.N02748 scaffold_14 + View
Eutrema salsugineum Thhalv10005473m.g PTHR22937 - RING FINGER CONTAINING PROTEIN scaffold_6 - View
Fragaria x ananassa FAN20G1867 PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb2-3 - View
Fragaria x ananassa FAN15G1912 PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb2-4 + View
Fragaria x ananassa FAN27G0573 PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb2-1 + View
Fragaria x ananassa FAN24G2489 KOG1493//KOG2930 - Anaphase-promoting complex (APC), subunit 11 // SCF ubiquitin ligase, Rbx1 component Fvb2-2 - View
Fragaria x ananassa FAN20G2802 PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb2-3 - View
Fragaria vesca FvH4_2g34090 KOG1493//KOG2930 - Anaphase-promoting complex (APC), subunit 11 // SCF ubiquitin ligase, Rbx1 component Fvb2 + View
Gossypium hirsutum Gohir.A13G041600 K10635 - E3 ubiquitin-protein ligase Arkadia [EC:6.3.2.19] (RNF111) A13 - View
Gossypium hirsutum Gohir.D02G090901 K10635 - E3 ubiquitin-protein ligase Arkadia [EC:6.3.2.19] (RNF111) D02 + View
Gossypium hirsutum Gohir.A11G193500 PTHR22937//PTHR22937:SF55 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED A11 - View
Gossypium hirsutum Gohir.D06G018500 K10635 - E3 ubiquitin-protein ligase Arkadia [EC:6.3.2.19] (RNF111) D06 + View
Gossypium hirsutum Gohir.A12G023000 PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED A12 + View
Gossypium hirsutum Gohir.D12G070300 PTHR22937//PTHR22937:SF55 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED D12 + View
Gossypium hirsutum Gohir.D13G040300 K10635 - E3 ubiquitin-protein ligase Arkadia [EC:6.3.2.19] (RNF111) D13 - View
Gossypium hirsutum Gohir.D11G200700 PTHR22937//PTHR22937:SF55 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED D11 - View
Gossypium hirsutum Gohir.A05G204100 K10635 - E3 ubiquitin-protein ligase Arkadia [EC:6.3.2.19] (RNF111) A05 - View
Gossypium hirsutum Gohir.A06G020000 PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED A06 + View
Gossypium hirsutum Gohir.D05G207300 K10635 - E3 ubiquitin-protein ligase Arkadia [EC:6.3.2.19] (RNF111) D05 - View
Gossypium hirsutum Gohir.D12G023700 PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED D12 + View
Gossypium hirsutum Gohir.A04G120400 PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED A04 + View
Gossypium hirsutum Gohir.D04G161900 PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED D04 + View
Glycine max Glyma.06G041000 K10635 - E3 ubiquitin-protein ligase Arkadia [EC:6.3.2.19] (RNF111) Gm06 - View
Glycine max Glyma.04G039701 PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm04 - View
Glycine max Glyma.17G240800 PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm17 + View
Gossypium raimondii Gorai.013G045200 Chr13 - View
Gossypium raimondii Gorai.007G214900 Chr07 - View
Gossypium raimondii Gorai.012G149900 Chr12 + View
Gossypium raimondii Gorai.009G213900 Chr09 - View
Gossypium raimondii Gorai.010G021500 Chr10 + View
Gossypium raimondii Gorai.008G077400 Chr08 - View
Gossypium raimondii Gorai.008G024100 Chr08 + View
Gossypium raimondii Gorai.005G101700 Chr05 + View
Helianthus annuus HanXRQChr09g0267451 Probable RING/U-box superfamily protein HanXRQChr09 - View
Helianthus annuus HanXRQChr08g0230541 Putative zinc finger, RING/FYVE/PHD-type HanXRQChr08 + View
Hydrangea macrophylla Hma1.2p1_0360F.1_g135710 Hma1.2p1_0360F.1 - View
Lupinus albus Lalb_Chr22g0355041 KOG3496 - Cytochrome c oxidase assembly protein/Cu2+ chaperone COX17 Lalb_Chr22 + View
Lotus japonicus Lj1g0026591 K10635 - E3 ubiquitin-protein ligase Arkadia [EC:6.3.2.19] (RNF111) chr1 + View
Lonicera japonica Lj4C769G12 GWHAAZE00000004 + View
Lonicera japonica Lj4C61T9 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_4_126801 PTHR22937//PTHR22937:SF55 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_4 - View
Lactuca sativa Lsat_1_v5_gn_1_21720 Lsat_1_v8_lg_1 + View
Lactuca sativa Lsat_1_v5_gn_0_4280 PTHR22937//PTHR22937:SF55 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_7 + View
Malus domestica MD08G1097400 RING/U-box superfamily protein Chr08 + View
Malus domestica MD15G1079700 RING/U-box superfamily protein Chr15 + View
Malus domestica MD05G1083400 RING/U-box superfamily protein Chr05 - View
Manihot esculenta Manes.13G122800 Chromosome13 + View
Manihot esculenta Manes.18G039700 Chromosome18 - View
Medicago truncatula Medtr1g019200 zinc finger (C3HC4-type RING finger) family protein chr1 + View
Medicago truncatula Medtr5g016920 zinc finger, C3HC4 type (RING finger) protein chr5 + View
Nicotiana tabacum Nitab4.5_0000287g0070 Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-type Nitab4.5_0000287 + View
Punica granatum PGR083G0833 NC_045133.1 - View
Punica granatum PGR031G2886 NC_045127.1 - View
Punica granatum PGR142G3349 NC_045128.1 + View
Prunus persica Prupe.8G127800 Pp08 - View
Prunus persica Prupe.1G432700 K10635 - E3 ubiquitin-protein ligase Arkadia [EC:6.3.2.19] (RNF111) Pp01 + View
Papaver somniferum PSO170G6274 NC_039360.1 - View
Papaver somniferum PSO210G7164 NC_039359.1 - View
Papaver somniferum PSO675G7872 NC_039358.1 - View
Populus trichocarpa Potri.002G124300 PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr02 + View
Populus trichocarpa Potri.007G045500 PTHR22937//PTHR22937:SF55 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr07 - View
Populus trichocarpa Potri.009G100100 PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr09 + View
Phaseolus vulgaris Phvul.009G066000 K10635 - E3 ubiquitin-protein ligase Arkadia [EC:6.3.2.19] (RNF111) Chr09 - View
Phaseolus vulgaris Phvul.001G023300 PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr01 - View
Phaseolus vulgaris Phvul.003G242600 PTHR22937 - RING FINGER CONTAINING PROTEIN Chr03 + View
Quercus lobata QL06p040897 6 + View
Quercus lobata QL02p004379 CM012294 + View
Quercus lobata QL11p034968 11 + View
Rosa chinensis RcHm_v2.0_Chr6g0308261 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim07G0227200 chr07 + View
Rhododendron simsii Rhsim08G0099500 chr08 + View
Rhododendron simsii Rhsim06G0052700 chr06 - View
Striga asiatica SGA_v2.0_scaffold28G11811 scaffold28 + View
Striga asiatica SGA_v2.0_scaffold14G06963 scaffold14 - View
Salvia bowleyana SalBow6G5553 GWHASIU00000002 - View
Salix brachista Sabra07G0040500 GWHAAZH00000007 - View
Salix brachista Sabra09G0076100 GWHAAZH00000009 + View
Salix brachista Sabra02G0097600 GWHAAZH00000002 + View
Salix brachista Sabra16G0191500 GWHAAZH00000016 + View
Simmondsia chinensis Sc15g0005980 GWHAASQ00000015 + View
Sechium edule Sed0004383 LG11 + View
Sechium edule Sed0014852 LG10 + View
Solanum lycopersicum Solyc04g078680.4 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1PN10_ARTAN) SL4.0ch04 + View
Solanum lycopersicum Solyc12g088740.2 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1PN10_ARTAN) SL4.0ch12 + View
Schrenkiella parvula Sp3g28780 PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED ch3-5 + View
Solanum pennellii Sopen04g032280 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch04 + View
Solanum pennellii Sopen12g030650 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch12 + View
Solanum tuberosum PGSC0003DMG400015408 Zinc finger protein ST4.03ch12 + View
Solanum tuberosum PGSC0003DMG400007954 Zinc finger protein ST4.03ch04 + View
Trochodendron aralioides TAR381G0132 group11 - View
Trochodendron aralioides TAR625G0353 group4 - View
Trochodendron aralioides TAR628G0833 group5 + View
Trochodendron aralioides TAR376G0642 group14 + View
Theobroma cacao Thecc.08G003700 RING/U-box superfamily protein Chromosome_8 + View
Theobroma cacao Thecc.02G103000 Binding protein Chromosome_2 - View
Theobroma cacao Thecc.01G058900 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104827193 probable E3 ubiquitin-protein ligase RHG1A isoform X1 NW_010960188.1 - View
Trifolium pratense TPR.G3771 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI36G1017 NC_052237.1 - View
Tripterygium wilfordii TWI31G1329 NC_052233.1 + View
Vaccinium macrocarpon vmacro21501 Similar to RHG1A: Probable E3 ubiquitin-protein ligase RHG1A (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G1412 CM024073.1 - View
Vigna mungo VMungo1309G2085 CM024072.1 + View
Vitis vinifera GSVIVG01022103001 chr7 - View
Vitis vinifera GSVIVG01009465001 chr18 + View