Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0014847 PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Malus domestica] Chr9 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G10650 LG-11 - View
Acer truncatum Atru.chr4.2567 chr4 - View
Actinidia chinensis Actinidia23477 Lachesis_group3 + View
Actinidia chinensis Actinidia40191 Lachesis_group22 - View
Arabidopsis lyrata AL3G16990 scaffold_3 - View
Arabidopsis lyrata AL6G30470 scaffold_6 + View
Avicennia marina MSTRG.3995 ScioBoG_102837_HRSCAF_103074 + View
Aquilegia oxysepala Aqoxy2G03272 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.53PAXP PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.67YB7U PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED arahy.Tifrunner.gnm1.Arahy.01 + View
Arabidopsis thaliana AT3G06140 RING/U-box superfamily protein Paralog of LOG2 (At3g09770)%2C a ubiquitin ligase that regulates amino acid export. RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 17 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G19080.1)%3B Has 7743 Blast hits to 5478 proteins in 376 species: Archae - 2%3B Bacteria - 144%3B Metazoa - 2405%3B Fungi - 531%3B Plants - 3352%3B Viruses - 272%3B Other Eukaryotes - 1037 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G19080 RING/U-box superfamily protein Paralog of LOG2 (At3g09770)%2C a ubiquitin ligase that regulates amino acid export. RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: N-terminal protein myristoylation%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G06140.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0626G068 AmTr_v1.0_scaffold00025 - View
Brassica carinata BcaC05g30052 ChrC05 + View
Brassica carinata BcaB08g36616 ChrB08 - View
Brassica carinata BcaC04g18616 ChrC04 - View
Brassica napus A10p20610 A10 - View
Brassica napus C09p57320 C09 - View
Brassica napus C05p61120 C05 + View
Brassica napus A05p41860 A05 + View
Brassica oleracea BolC9t58604H C9 - View
Brassica oleracea BolC5t34769H C5 + View
Brassica rapa BraA10t44123Z A10 - View
Brassica rapa BraA05t22905Z A05 + View
Beta vulgaris EL10Ac3g06362 PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Chr3_EL10_PGA_scaffold7 + View
Cannabis sativa CANSAT78G2116 NC_044376.1 + View
Cicer arietinum L. Ca_00642_v3 Ca_LG1_v3 - View
Corylus avellana Haze_00960 Similar to LUL3: Probable E3 ubiquitin-protein ligase LUL3 (Arabidopsis thaliana OX%3D3702) 1 - View
Citrus clementina Ciclev10005143m.g scaffold_9 + View
Ceratophyllum demersum CDE12G0576 10 - View
Ceratophyllum demersum CDE01G0534 11 - View
Carpinus fangiana Cfa015584 Cfa06 + View
Cardamine hirsuta CARHR080650 RING finger protein Chr3 - View
Cardamine hirsuta CARHR193910 RING finger protein Chr6 - View
Carya illinoinensis CiPaw.02G092600 PTHR22996:SF4 - E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Chr02 + View
Carya illinoinensis CiPaw.01G160200 PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Chr01 + View
Citrullus lanatus ClCG05G005430 RING finger protein 157 CG_Chr05 - View
Cucumis melo MELO3C006565.2 RING finger protein chr06 - View
Carica papaya Cpa.g.sc16.23 supercontig_16 - View
Chenopodium quinoa AUR62030090 LUL3: Probable E3 ubiquitin-protein ligase LUL3 C_Quinoa_Scaffold_1447 + View
Chenopodium quinoa AUR62038215 LUL3: Probable E3 ubiquitin-protein ligase LUL3 C_Quinoa_Scaffold_4336 - View
Capsella rubella Carub.0006s1740 PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED scaffold_6 + View
Capsella rubella Carub.0003s0557 PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED scaffold_3 - View
Cucumis sativus L. CsaV3_3G013720 RING finger protein chr3 - View
Daucus carota DCAR_030599 hypothetical protein DCARv2_Chr9 + View
Daucus carota DCAR_027153 hypothetical protein DCARv2_Chr8 - View
Davidia involucrata Dinv38395 GWHABJS00000016 - View
Davidia involucrata Dinv44481 GWHABJS00000014 - View
Durio zibethinus Duzib212G0691 NW_019168026.1 - View
Durio zibethinus Duzib151G0877 NW_019167904.1 + View
Erigeron canadensis ECA234G0476 Conyza_canadensis_scaffold:4 + View
Eucalyptus grandis Eucgr.H04473 Chr08 + View
Eucalyptus grandis Eucgr.H03593 Chr08 - View
Erythranthe guttata Migut.G00266 scaffold_7 + View
Eutrema salsugineum Thhalv10021004m.g PTHR22996:SF4 - E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED scaffold_13 + View
Eutrema salsugineum Thhalv10013842m.g PTHR22996:SF4 - E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED scaffold_2 + View
Fragaria x ananassa FAN12G1364 PTHR22996:SF4 - E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Fvb4-3 - View
Fragaria x ananassa FAN07G0074 PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Fvb4-4 + View
Fragaria x ananassa FAN17G1430 PTHR22996:SF4 - E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Fvb4-2 + View
Fragaria x ananassa FAN22G1377 PTHR22996:SF4 - E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Fvb4-1 - View
Fragaria vesca FvH4_4g14510 PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Fvb4 + View
Glycine max Glyma.07G257200 PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Gm07 + View
Glycine max Glyma.13G208500 PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Gm13 - View
Glycine max Glyma.15G104300 PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Gm15 + View
Glycine max Glyma.17G016900 PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Gm17 - View
Helianthus annuus HanXRQChr10g0310411 Probable RING/U-box superfamily protein HanXRQChr10 + View
Lupinus albus Lalb_Chr13g0304111 PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Lalb_Chr13 + View
Lotus japonicus Lj6g0018944 PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED chr6 + View
Lotus japonicus Lj4g0020354 PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED chr4 - View
Lonicera japonica Lj6A565G29 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_5_76001 PTHR22996:SF4 - E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Lsat_1_v8_lg_5 - View
Magnolia biondii MBI17_g34454_MAGBIO AED:0.11 Chr17 + View
Malus domestica MD16G1184200 RING/U-box superfamily protein Chr16 + View
Malus domestica MD13G1183800 RING/U-box superfamily protein Chr13 + View
Manihot esculenta Manes.03G184500 Chromosome03 - View
Manihot esculenta Manes.15G023300 Chromosome15 + View
Medicago truncatula Medtr4g117250 zinc finger, C3HC4 type (RING finger) protein chr4 - View
Medicago truncatula Medtr2g022210 zinc finger, C3HC4 type (RING finger) protein chr2 + View
Nelumbo nucifera Nn1g02167 chr1 + View
Nelumbo nucifera Nn4g26197 chr4 + View
Petunia axillaris Peaxi162Scf00196g01023 RING/U-box superfamily protein Peaxi162Scf00196 - View
Punica granatum PGR004G1970 NC_045131.1 + View
Prunus persica Prupe.1G151600 PTHR22996:SF4 - E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Pp01 + View
Pisum sativum Psat4g031640 Zinc finger + C3HC4 type (RING finger) chr4LG4 + View
Pisum sativum Psat1g183480 Zinc finger + C3HC4 type (RING finger) chr1LG6 - View
Papaver somniferum PSO210G6129 NC_039359.1 - View
Papaver somniferum PSO832G4315 NC_039367.1 - View
Papaver somniferum PSO407G0118 NW_020651082.1 + View
Populus trichocarpa Potri.008G202700 PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Chr08 + View
Populus trichocarpa Potri.005G036400 PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Chr05 - View
Populus trichocarpa Potri.013G025400 PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Chr13 - View
Populus trichocarpa Potri.010G030600 PTHR22996//PTHR22996:SF4 - MAHOGUNIN // E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Chr10 - View
Phaseolus vulgaris Phvul.006G153500 PTHR22996:SF4 - E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED Chr06 - View
Quercus lobata QL06p004200 6 - View
Rosa chinensis RcHm_v2.0_Chr4g0418321 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim04G0206900 chr04 - View
Striga asiatica SGA_v2.0_scaffold237G43823 scaffold237 - View
Striga asiatica SGA_v2.0_scaffold39G15364 scaffold39 - View
Salvia bowleyana SalBow2G1854 GWHASIU00000007 - View
Salix brachista Sabra08G0158800 GWHAAZH00000008 - View
Salix brachista Sabra10G0010900 GWHAAZH00000010 - View
Salix brachista Sabra13G0026600 GWHAAZH00000013 - View
Simmondsia chinensis Sc13g0004000 GWHAASQ00000013 + View
Sechium edule Sed0007959 LG02 - View
Sechium edule Sed0007533 LG12 - View
Sapria himalayana SHI00380 scaffold1_25991295 + View
Solanum lycopersicum Solyc01g080080.3 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1KJJ9_ARTAN) SL4.0ch01 - View
Schrenkiella parvula Sp6g25300 PTHR22996:SF4 - E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED ch6-6 - View
Schrenkiella parvula Sp3g05090 PTHR22996:SF4 - E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED ch3-1 - View
Solanum pennellii Sopen01g031870 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 17 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400028580 Mahogunin ST4.03ch01 + View
Trochodendron aralioides TAR365G0127 group16 - View
Trochodendron aralioides TAR636G1817 group1 - View
Theobroma cacao Thecc.04G221800 RING/U-box superfamily protein Chromosome_4 + View
Theobroma cacao Thecc.05G307000 RING/U-box superfamily protein Chromosome_5 - View
Tarenaya hassleriana THA.LOC104820106 probable E3 ubiquitin-protein ligase LUL4 NW_010966177.1 + View
Trifolium pratense TPR.G20117 Tp57577_TGAC_v2_LG4 + View
Tripterygium wilfordii TWI73G0010 NC_052232.1 - View
Vaccinium macrocarpon vmacro08280 Similar to LUL4: Probable E3 ubiquitin-protein ligase LUL4 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G0170 CM024074.1 + View
Vigna mungo VMungo0540G2336 CM024075.1 - View
Vitis vinifera GSVIVG01017889001 chr5 + View