Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr10.1842 chr10 - View
Actinidia chinensis Actinidia05647 Lachesis_group20 + View
Actinidia chinensis Actinidia16562 Lachesis_group0 + View
Arabidopsis lyrata AL4G29580 scaffold_4 + View
Avicennia marina MSTRG.15870 ScioBoG_19538_HRSCAF_19626 - View
Amaranthus hybridus Ah.14g089630 Squamosa promoter-binding protein 1 AmaHy_arrow1_Scaffold_14 - View
Aquilegia oxysepala Aqoxy1G02358 CHR01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.B3PCVN PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6HMZ07 PF03110 - SBP domain (SBP) arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LT7EDZ PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED arahy.Tifrunner.gnm1.Arahy.18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XL1QYV PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MVBZ07 PF03110 - SBP domain (SBP) arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GW0D9K PF03110 - SBP domain (SBP) arahy.Tifrunner.gnm1.Arahy.10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.18KTSH PF03110 - SBP domain (SBP) arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT2G33810 squamosa promoter binding protein-like 3 Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family%2C a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box%2C which encodes the SBP-domain%2C required and sufficient for interaction with DNA. It binds DNA%2C may directly regulate AP1%2C and is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR. squamosa promoter binding protein-like 3 (SPL3)%3B CONTAINS InterPro DOMAIN/s: Squamosa promoter-binding protein (InterPro:IPR017238)%2C Transcription factor%2C SBP-box (InterPro:IPR004333)%3B BEST Arabidopsis thaliana protein match is: squamosa promoter-binding protein-like 12 (TAIR:AT3G60030.1)%3B Has 874 Blast hits to 869 proteins in 50 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 25%3B Fungi - 10%3B Plants - 838%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB02g10595 ChrB02 + View
Brassica carinata BcaC09g48482 ChrC09 - View
Brassica carinata BcaB06g29551 ChrB06 - View
Brassica napus A01p38590 A01 - View
Brassica napus C04p63380 C04 + View
Brassica napus A04p26040 A04 + View
Brassica napus A05p11760 A05 - View
Brassica napus C05p51970 C05 + View
Brassica oleracea BolC4t27813H C4 + View
Brassica rapa BraA04t18106Z A04 + View
Brassica rapa BraA01t03925Z A01 + View
Brassica rapa BraA05t20120Z A05 - View
Beta vulgaris EL10Ac8g20416 PF03110 - SBP domain (SBP) Chr8_EL10_PGA_scaffold4 + View
Capsicum annuum CAN.G529.23 PGAv.1.6.scaffold529 + View
Cannabis sativa CANSAT64G1429 NC_044379.1 + View
Cicer arietinum L. Ca_18573_v3 Ca_LG6_v3 + View
Corylus avellana Haze_13205 Similar to SBP1: Squamosa promoter-binding protein 1 (Antirrhinum majus OX%3D4151) 5 + View
Corylus avellana Haze_06407 Similar to SBP1: Squamosa promoter-binding protein 1 (Antirrhinum majus OX%3D4151) 2 - View
Coffea canephora Cc05_g11850 Putative uncharacterized protein chr5 - View
Coffea canephora Cc02_g13600 Squamosa promoter-binding protein 1 chr2 + View
Coffea canephora Cc05_g07500 Putative uncharacterized protein chr5 + View
Citrus clementina Ciclev10016841m.g scaffold_2 - View
Citrus clementina Ciclev10017104m.g scaffold_2 + View
Carpinus fangiana Cfa014642 Cfa06 + View
Cardamine hirsuta CARHR127930 squamosa promoter binding protein-like 3 Chr4 + View
Carya illinoinensis CiPaw.09G061900 PF03110 - SBP domain (SBP) Chr09 + View
Carya illinoinensis CiPaw.11G171300 PF03110 - SBP domain (SBP) Chr11 + View
Carya illinoinensis CiPaw.03G179400 PTHR31251//PTHR31251:SF9 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED Chr03 + View
Carya illinoinensis CiPaw.10G051000 PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED Chr10 + View
Citrullus lanatus ClCG01G023100 Squamosa promoter-binding protein, putative CG_Chr01 + View
Citrullus lanatus ClCG11G017960 Squamosa promoter-binding protein, putative CG_Chr11 - View
Citrullus lanatus ClCG03G008110 Squamosa promoter-binding protein, putative CG_Chr03 - View
Cucumis melo MELO3C032886.2 squamosa promoter-binding protein 1 chr08 - View
Cucumis melo MELO3C002618.2 Squamosa promoter-binding-like protein chr12 - View
Corchorus olitorius COL.COLO4_31440 Transcription factor%2C SBP-box AWUE01020854.1 - View
Capsella rubella Carub.0004s1548 PF03110 - SBP domain (SBP) scaffold_4 + View
Cucumis sativus L. CsaV3_4G033580 Squamosa promoter-binding protein chr4 - View
Cucumis sativus L. CsaV3_1G012440 Squamosa promoter-binding-like protein chr1 + View
Cucumis sativus L. CsaV3_6G050240 Squamosa promoter-binding-like protein chr6 + View
Daucus carota DCAR_021254 hypothetical protein DCARv2_Chr6 - View
Daucus carota DCAR_008025 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv13392 GWHABJS00000013 + View
Davidia involucrata Dinv40583 GWHABJS00000274 + View
Davidia involucrata Dinv17331 GWHABJS00000020 - View
Davidia involucrata Dinv14930 GWHABJS00000001 - View
Davidia involucrata Dinv20191 GWHABJS00000013 + View
Durio zibethinus Duzib160G0615 NW_019168015.1 - View
Durio zibethinus Duzib235G0885 NW_019167982.1 - View
Durio zibethinus Duzib213G0865 NW_019167993.1 + View
Durio zibethinus Duzib192G0476 NW_019168037.1 + View
Durio zibethinus Duzib052G1134 NW_019167849.1 - View
Erigeron canadensis ECA234G2907 Conyza_canadensis_scaffold:4 + View
Eucalyptus grandis Eucgr.E03260 Chr05 - View
Eucalyptus grandis Eucgr.K01046 Chr11 + View
Erythranthe guttata Migut.M00787 scaffold_13 - View
Erythranthe guttata Migut.M01124 scaffold_13 - View
Eutrema salsugineum Thhalv10017406m.g PF03110 - SBP domain (SBP) scaffold_10 + View
Fragaria x ananassa FAN21G3081 PF03110 - SBP domain (SBP) Fvb3-2 - View
Fragaria x ananassa FAN11G3094 PTHR31251//PTHR31251:SF9 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED Fvb3-4 + View
Fragaria x ananassa FAN25G3756 PF03110 - SBP domain (SBP) Fvb3-1 + View
Fragaria x ananassa FAN14G3654 PTHR31251//PTHR31251:SF9 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED Fvb6-1 - View
Fragaria x ananassa FAN16G2365 PF03110 - SBP domain (SBP) Fvb3-3 - View
Fragaria x ananassa FAN21G3098 PTHR31251//PTHR31251:SF9 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED Fvb3-2 + View
Fragaria x ananassa FAN16G0085 PTHR31251//PTHR31251:SF9 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED Fvb3-3 - View
Fragaria x ananassa FAN11G2610 PF03110 - SBP domain (SBP) Fvb3-4 + View
Fragaria vesca FvH4_3g08880 PF03110 - SBP domain (SBP) Fvb3 - View
Fragaria vesca FvH4_6g26530 PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED Fvb6 + View
Fragaria vesca FvH4_3g19650 PTHR31251//PTHR31251:SF9 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED Fvb3 - View
Gossypium hirsutum Gohir.D01G048500 PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED D01 - View
Gossypium hirsutum Gohir.D10G027600 PF03110 - SBP domain (SBP) D10 + View
Gossypium hirsutum Gohir.A01G061900 PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED A01 - View
Gossypium hirsutum Gohir.A10G027200 PF03110 - SBP domain (SBP) A10 + View
Glycine max Glyma.13G274900 PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED Gm13 - View
Glycine max Glyma.13G177400 PF03110 - SBP domain (SBP) Gm13 - View
Glycine max Glyma.15G076200 PF03110 - SBP domain (SBP) Gm15 + View
Glycine max Glyma.07G199000 PF03110 - SBP domain (SBP) Gm07 + View
Glycine max Glyma.13G295401 PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED Gm13 - View
Glycine max Glyma.12G226000 PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED Gm12 + View
Glycine max Glyma.13G237400 PF03110 - SBP domain (SBP) Gm13 - View
Gossypium raimondii Gorai.002G068300 Chr02 - View
Gossypium raimondii Gorai.011G029400 Chr11 + View
Helianthus annuus HanXRQChr17g0560071 Probable squamosa promoter-binding protein 1 HanXRQChr17 - View
Hydrangea macrophylla Hma1.2p1_0208F.1_g088310 Hma1.2p1_0208F.1 + View
Hydrangea macrophylla Hma1.2p1_0002F.1_g002110 Hma1.2p1_0002F.1 + View
Lupinus albus Lalb_Chr15g0089721 PF03110 - SBP domain (SBP) Lalb_Chr15 - View
Lupinus albus Lalb_Chr18g0059471 PF03110 - SBP domain (SBP) Lalb_Chr18 - View
Lupinus albus Lalb_Chr20g0121661 PF03110 - SBP domain (SBP) Lalb_Chr20 - View
Lotus japonicus Lj6g0009941 PF03110 - SBP domain (SBP) chr6 - View
Lotus japonicus Lj3g0002686 PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED chr3 + View
Lotus japonicus Lj3g0002499 PF03110 - SBP domain (SBP) chr3 - View
Lotus japonicus Lj4g0006856 PF03110 - SBP domain (SBP) chr4 + View
Lonicera japonica Lj2C290T6 GWHAAZE00000002 + View
Lonicera japonica Lj1A712T58 GWHAAZE00000001 - View
Lonicera japonica Lj1A1202G62 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_1_128400 Lsat_1_v8_lg_1 + View
Lactuca sativa Lsat_1_v5_gn_4_52201 Lsat_1_v8_lg_4 - View
Malus domestica MD09G1244200 squamosa promoter binding protein-like 4 Chr09 - View
Malus domestica MD05G1312300 squamosa promoter binding protein-like 3 Chr05 - View
Malus domestica MD10G1291800 squamosa promoter binding protein-like 3 Chr10 - View
Manihot esculenta Manes.13G144400 Chromosome13 - View
Manihot esculenta Manes.16G029900 Chromosome16 + View
Manihot esculenta Manes.03G106900 Chromosome03 - View
Manihot esculenta Manes.17G047500 Chromosome17 + View
Medicago truncatula Medtr4g088555 squamosa promoter-binding-like protein chr4 - View
Medicago truncatula Medtr2g014200 squamosa promoter-binding-like protein chr2 + View
Olea europaea Oeu056098.1 chr6 + View
Petunia axillaris Peaxi162Scf00069g01624 squamosa promoter-binding protein-like 12 Peaxi162Scf00069 + View
Punica granatum PGR042G0872 NC_045130.1 - View
Punica granatum PGR042G1074 NC_045130.1 + View
Prunus persica Prupe.4G050400 PF03110 - SBP domain (SBP) Pp04 + View
Prunus persica Prupe.4G177200 PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED Pp04 - View
Pisum sativum Psat7g115040 SBP domain chr7LG7 - View
Pisum sativum Psat1g203760 SBP domain chr1LG6 - View
Papaver somniferum PSO675G4132 NC_039358.1 + View
Papaver somniferum PSO832G1461 NC_039367.1 - View
Papaver somniferum PSO541G0770 NC_039363.1 - View
Papaver somniferum PSO210G5411 NC_039359.1 - View
Populus trichocarpa Potri.011G055900 PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED Chr11 + View
Populus trichocarpa Potri.004G046700 PF03110 - SBP domain (SBP) Chr04 + View
Populus trichocarpa Potri.007G138800 PF03110 - SBP domain (SBP) Chr07 - View
Populus trichocarpa Potri.001G398200 PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED Chr01 - View
Populus trichocarpa Potri.011G116800 PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED Chr11 - View
Phaseolus vulgaris Phvul.006G183900 PF03110 - SBP domain (SBP) Chr06 - View
Phaseolus vulgaris Phvul.005G101900 PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED Chr05 - View
Phaseolus vulgaris Phvul.002G230300 PF03110 - SBP domain (SBP) Chr02 + View
Quercus lobata QL05p041622 5 + View
Quercus lobata QL08p039703 8 + View
Quercus lobata QL08p022416 8 + View
Rosa chinensis RcHm_v2.0_Chr5g0032861 RcHm_v2.0_Chr5 - View
Rosa chinensis RcHm_v2.0_Chr5g0008871 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim06G0201200 chr06 + View
Rhododendron simsii Rhsim13G0179600 chr13 + View
Striga asiatica SGA_v2.0_scaffold73G24242 scaffold73 - View
Striga asiatica SGA_v2.0_scaffold70G23509 scaffold70 - View
Striga asiatica SGA_v2.0_scaffold22G09686 scaffold22 - View
Salvia bowleyana SalBow8G2583 GWHASIU00000004 + View
Salix brachista Sabra11G0038000 GWHAAZH00000011 - View
Salix brachista Sabra04G0029000 GWHAAZH00000004 + View
Salix brachista Sabra16G0261000 GWHAAZH00000016 - View
Simmondsia chinensis Sc17g0006100 GWHAASQ00000017 - View
Sechium edule Sed0001992 LG14 + View
Sechium edule Sed0012089 LG01 + View
Sechium edule Sed0020080 LG10 - View
Solanum lycopersicum Solyc02g077920.4 Colorless non-ripening SL4.0ch02 - View
Solanum lycopersicum Solyc07g053810.3 Squamosa promoter binding protein 4 SL4.0ch07 - View
Solanum lycopersicum Solyc10g009080.4 Squamosa promoter binding protein 3 SL4.0ch10 + View
Schrenkiella parvula Sp4g16200 PF03110 - SBP domain (SBP) ch4-6 + View
Solanum pennellii Sopen07g027780 member of SPL gene family, encodes DNA binding proteins and putative transcription factors. All have the SBP-box, which encodes the SBP-domain, required for and sufficient for interaction with DNA. | squamosa promoter binding protein-like 1 (SPL1) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box , Ankyrin repeat-containing domain , Ankyrin repeat | BEST Arabidopsis thaliana protein match is: squamosa promoter-binding protein-like 12 Spenn-ch07 - View
Solanum pennellii Sopen02g022770 Squamosa promoter-binding protein 1 - Antirrhinum majus (Garden snapdragon), squamosa promoter-binding protein-like 12 (SPL12) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain , Transcription factor, SBP-box | BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 1 Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400022824 Squamosa promoter binding ST4.03ch10 + View
Solanum tuberosum PGSC0003DMG401029709 Squamosa promoter binding ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400032817 Squamosa promoter binding ST4.03ch07 + View
Selenicereus undatus Hund21214 Scaffold_33680 - View
Trochodendron aralioides TAR624G0899 group9 - View
Trochodendron aralioides TAR626G0880 group3 + View
Trochodendron aralioides TAR629G3115 group0 + View
Trochodendron aralioides TAR627G0867 group6 - View
Theobroma cacao Thecc.06G183900 Squamosa promoter binding protein-like 3 Chromosome_6 - View
Theobroma cacao Thecc.02G183100 Squamosa promoter binding protein-like 4 Chromosome_2 + View
Theobroma cacao Thecc.07G094900 Chromosome_7 + View
Trifolium pratense TPR.G16326 Tp57577_TGAC_v2_scaf_271 - View
Trifolium pratense TPR.G16525 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI38G0968 NC_052252.1 + View
Tripterygium wilfordii TWI23G0382 NC_052239.1 - View
Tripterygium wilfordii TWI63G0712 NC_052240.1 + View
Tripterygium wilfordii TWI39G1043 NC_052250.1 + View
Tripterygium wilfordii TWI38G1698 NC_052252.1 - View
Vaccinium macrocarpon vmacro11882 Similar to SPL8: Squamosa promoter-binding-like protein 8 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G0460 CM024079.1 + View
Vigna mungo VMungo0540G1566 CM024075.1 + View
Vigna mungo VMungo0251G0185 CM024069.1 + View
Vigna mungo VMungo1080G1216 CM024079.1 + View
Vitis vinifera GSVIVG01021087001 chr10 + View
Vitis vinifera GSVIVG01014302001 chr19 - View
Vitis vinifera GSVIVG01020578001 chr12 - View