Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0031397 hypothetical protein PRUPE_ppa000080mg [Prunus persica] Chr3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G16560 LG-6 + View
Acer truncatum Atru.chr5.3308 chr5 + View
Actinidia chinensis Actinidia23588 Lachesis_group23 + View
Actinidia chinensis Actinidia31254 Lachesis_group16 + View
Arabidopsis lyrata AL7G10500 scaffold_7 - View
Avicennia marina MSTRG.27643 ScioBoG_94932_HRSCAF_95134 - View
Avicennia marina MSTRG.5450 ScioBoG_102838_HRSCAF_103081 + View
Amaranthus hybridus Ah.01g022910 AmaHy_arrow1_Scaffold_1 + View
Amaranthus hybridus Ah.01g008480 E3 ubiquitin-protein ligase UPL3 (Ubiquitin-protein ligase 3) (EC 2.3.2.26) (HECT ubiquitin-protein ligase 3) (HECT-type E3 ubiquitin transferase UPL3) (Protein KAKTUS) AmaHy_arrow1_Scaffold_1 - View
Aquilegia oxysepala Aqoxy6G02183 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5SR8FF K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VNV0G0 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT4G38600 HECT ubiquitin protein ligase family protein KAK encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. KAKTUS (KAK)%3B FUNCTIONS IN: ubiquitin-protein ligase activity%3B INVOLVED IN: trichome branching%2C DNA endoreduplication%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989)%2C Armadillo (InterPro:IPR000225)%2C Armadillo-type fold (InterPro:IPR016024)%2C HECT (InterPro:IPR000569)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 (TAIR:AT5G02880.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaC01g00239 ChrC01 - View
Brassica napus C03p77170 C03 - View
Brassica napus A08p24140 A08 + View
Brassica oleracea BolC3t19969H C3 - View
Brassica rapa BraA08t34369Z A08 + View
Beta vulgaris EL10Ac9g21391 PTHR11254//PTHR11254:SF73 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // E3 UBIQUITIN-PROTEIN LIGASE TRIP12 Chr9_EL10_PGA_scaffold8 - View
Capsicum annuum CAN.G588.70 PGAv.1.6.scaffold588 + View
Cannabis sativa CANSAT25G3273 NC_044370.1 - View
Cicer arietinum L. Ca_19064_v3 Ca_LG6_v3 + View
Cicer arietinum L. Ca_15304_v3 Ca_LG5_v3 - View
Corylus avellana Haze_02149 Similar to UPL3: E3 ubiquitin-protein ligase UPL3 (Arabidopsis thaliana OX%3D3702) 1 - View
Coffea canephora Cc02_g16240 E3 ubiquitin-protein ligase UPL3 chr2 - View
Citrus clementina Ciclev10027670m.g scaffold_8 - View
Ceratophyllum demersum CDE05G1307 3 - View
Carpinus fangiana Cfa005234 Cfa02 + View
Carya illinoinensis CiPaw.06G122700 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Chr06 - View
Carya illinoinensis CiPaw.05G081300 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Chr05 + View
Citrullus lanatus ClCG02G011880 E3 ubiquitin-protein ligase UPL3 CG_Chr02 + View
Cucumis melo MELO3C020814.2 E3 ubiquitin-protein ligase UPL3 chr11 - View
Corchorus olitorius COL.COLO4_17325 Armadillo AWUE01016328.1 + View
Carica papaya Cpa.g.sc37.145 supercontig_37 - View
Chenopodium quinoa AUR62010051 UPL3: E3 ubiquitin-protein ligase UPL3 C_Quinoa_Scaffold_1257 - View
Chenopodium quinoa AUR62013042 UPL3: E3 ubiquitin-protein ligase UPL3 C_Quinoa_Scaffold_1040 - View
Capsella rubella Carub.0007s0047 scaffold_7 - View
Cucumis sativus L. CsaV3_2G016050 E3 ubiquitin-protein ligase chr2 + View
Daucus carota DCAR_022773 hypothetical protein DCARv2_Chr6 + View
Daucus carota DCAR_003166 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv14100 GWHABJS00000005 - View
Davidia involucrata Dinv41946 GWHABJS00000002 + View
Davidia involucrata Dinv40117 GWHABJS00000014 - View
Durio zibethinus Duzib132G0795 NW_019167915.1 - View
Durio zibethinus Duzib248G0095 NW_019168048.1 + View
Erigeron canadensis ECA234G2208 Conyza_canadensis_scaffold:4 + View
Eucalyptus grandis Eucgr.I01410 Chr09 + View
Erythranthe guttata Migut.N01316 scaffold_14 + View
Eutrema salsugineum Thhalv10024192m.g PTHR11254:SF73 - E3 UBIQUITIN-PROTEIN LIGASE TRIP12 scaffold_1 + View
Fragaria x ananassa FAN15G1966 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Fvb2-4 - View
Fragaria x ananassa FAN27G1306 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Fvb2-1 - View
Fragaria x ananassa FAN24G0828 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Fvb2-2 + View
Fragaria x ananassa FAN20G1059 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Fvb2-3 + View
Fragaria vesca FvH4_2g01290 PTHR11254:SF73 - E3 UBIQUITIN-PROTEIN LIGASE TRIP12 Fvb2 - View
Gossypium hirsutum Gohir.D01G002400 PTHR11254//PTHR11254:SF73 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // E3 UBIQUITIN-PROTEIN LIGASE TRIP12 D01 - View
Gossypium hirsutum Gohir.D12G034800 PTHR11254//PTHR11254:SF73 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // E3 UBIQUITIN-PROTEIN LIGASE TRIP12 D12 + View
Gossypium hirsutum Gohir.A12G037600 PTHR11254//PTHR11254:SF73 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // E3 UBIQUITIN-PROTEIN LIGASE TRIP12 A12 - View
Gossypium hirsutum Gohir.A01G167600 PTHR11254//PTHR11254:SF73 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // E3 UBIQUITIN-PROTEIN LIGASE TRIP12 A01 + View
Gossypium hirsutum Gohir.D01G158700 PTHR11254//PTHR11254:SF73 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // E3 UBIQUITIN-PROTEIN LIGASE TRIP12 D01 + View
Glycine max Glyma.11G107500 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Gm11 + View
Glycine max Glyma.04G004000 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Gm04 - View
Glycine max Glyma.12G032500 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Gm12 + View
Glycine max Glyma.06G003600 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Gm06 - View
Gossypium raimondii Gorai.002G003200 Chr02 - View
Gossypium raimondii Gorai.002G196900 Chr02 + View
Gossypium raimondii Gorai.008G035900 Chr08 + View
Helianthus annuus HanXRQChr10g0300921 Probable HEAT repeat ;HECT-domain (ubiquitin-transferase) HanXRQChr10 - View
Lupinus albus Lalb_Chr19g0139131 PTHR11254:SF73 - E3 UBIQUITIN-PROTEIN LIGASE TRIP12 Lalb_Chr19 - View
Lupinus albus Lalb_Chr01g0001851 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Lalb_Chr01 + View
Lupinus albus Lalb_Chr03g0025151 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Lalb_Chr03 + View
Lotus japonicus Lj1g0027642 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) chr1 + View
Lotus japonicus Lj3g0017227 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) chr3 + View
Lonicera japonica Lj9C393T4 GWHAAZE00000009 + View
Lonicera japonica Lj5C179T14 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_8_124281 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_4_71560 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Lsat_1_v8_lg_4 - View
Malus domestica MD05G1120900 HEAT repeat Chr05 + View
Manihot esculenta Manes.04G074400 Chromosome04 - View
Medicago truncatula Medtr4g073370 E3 ubiquitin-protein ligase chr4 - View
Nelumbo nucifera Nn5g30770 chr5 + View
Nelumbo nucifera Nn6g31999 chr6 - View
Nicotiana tabacum Nitab4.5_0001889g0100 Armadillo-like helical, HECT, Armadillo-type fold Nitab4.5_0001889 - View
Petunia axillaris Peaxi162Scf00362g00716 ubiquitin-protein ligase 4 Peaxi162Scf00362 - View
Petunia axillaris Peaxi162Scf00042g02521 ubiquitin-protein ligase 4 Peaxi162Scf00042 - View
Punica granatum PGR142G4388 NC_045128.1 - View
Prunus persica Prupe.8G164700 PTHR11254:SF73 - E3 UBIQUITIN-PROTEIN LIGASE TRIP12 Pp08 + View
Papaver somniferum PSO675G1883 NC_039358.1 + View
Papaver somniferum PSO541G1030 NC_039363.1 + View
Populus trichocarpa Potri.009G134300 PTHR11254//PTHR11254:SF73 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // E3 UBIQUITIN-PROTEIN LIGASE TRIP12 Chr09 + View
Populus trichocarpa Potri.004G174700 PTHR11254//PTHR11254:SF73 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // E3 UBIQUITIN-PROTEIN LIGASE TRIP12 Chr04 + View
Phaseolus vulgaris Phvul.009G119700 PTHR11254:SF73 - E3 UBIQUITIN-PROTEIN LIGASE TRIP12 Chr09 - View
Phaseolus vulgaris Phvul.011G035200 PTHR11254:SF73 - E3 UBIQUITIN-PROTEIN LIGASE TRIP12 Chr11 + View
Quercus lobata QL11p050142 11 + View
Rosa chinensis RcHm_v2.0_Chr6g0251951 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim05G0060600 chr05 - View
Striga asiatica SGA_v2.0_scaffold80G25844 scaffold80 - View
Striga asiatica SGA_v2.0_scaffold207G41915 scaffold207 + View
Striga asiatica SGA_v2.0_scaffold58G20376 scaffold58 - View
Salvia bowleyana SalBow3G3185 GWHASIU00000006 - View
Salix brachista Sabra04G0116500 GWHAAZH00000004 + View
Salix brachista Sabra09G0104000 GWHAAZH00000009 + View
Simmondsia chinensis Sc08g0002990 GWHAASQ00000008 - View
Sechium edule Sed0004775 LG01 - View
Sechium edule Sed0008816 LG05 + View
Solanum lycopersicum Solyc01g111530.3 E3 ubiquitin-protein ligase UPL3 (AHRD V3.3 *** A0A1U8E9F6_CAPAN) SL4.0ch01 + View
Solanum lycopersicum Solyc10g055450.2 E3 ubiquitin-protein ligase UPL3 (AHRD V3.3 *** A0A2G3ATT0_CAPCH) SL4.0ch10 + View
Solanum pennellii Sopen10g025230 encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. | KAKTUS (KAK) | FUNCTIONS IN: ubiquitin-protein ligase activity | INVOLVED IN: trichome branching, DNA endoreduplication | LOCATED IN: plasma membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Armadillo-like helical , Armadillo , Armadillo-type fold , HECT | BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 Spenn-ch10 + View
Solanum pennellii Sopen01g053570 encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. | KAKTUS (KAK) | FUNCTIONS IN: ubiquitin-protein ligase activity | INVOLVED IN: trichome branching, DNA endoreduplication | LOCATED IN: plasma membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Armadillo-like helical , Armadillo , Armadillo-type fold , HECT | BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 4 Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG401011946 KAK (KAKTUS) isoform 1 ST4.03ch10 + View
Selenicereus undatus Hund06431 Scaffold_33676 + View
Trochodendron aralioides TAR376G0437 group14 + View
Trochodendron aralioides TAR628G0375 group5 + View
Trochodendron aralioides TAR381G1293 group11 - View
Trochodendron aralioides TAR625G0357 group4 - View
Theobroma cacao Thecc.02G061100 HEAT repeat Chromosome_2 - View
Trifolium pratense TPR.G39221 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI31G1474 NC_052233.1 - View
Vaccinium macrocarpon vmacro17354 Similar to UPL3: E3 ubiquitin-protein ligase UPL3 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1127G1414 CM024076.1 + View
Vitis vinifera GSVIVG01024033001 chr3 + View