Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0022863 unnamed protein product [Vitis vinifera] Contig1102 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr5.1856 chr5 + View
Acer truncatum Atru.chr2.1067 chr2 + View
Actinidia chinensis Actinidia39982 Lachesis_group22 - View
Arabidopsis lyrata AL8G16160 scaffold_8 + View
Arabidopsis lyrata AL1G13690 scaffold_1 + View
Aquilegia oxysepala Aqoxy2G03751 CHR02 + View
Arabidopsis thaliana AT5G43950 vacuolar protein sorting-associated protein (DUF946) Plant protein of unknown function (DUF946)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF946 (InterPro:IPR009291)%3B BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF946) (TAIR:AT1G04090.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT1G04090 vacuolar sorting-associated protein (DUF946) Plant protein of unknown function (DUF946)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF946 (InterPro:IPR009291)%3B BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF946) (TAIR:AT5G43950.1)%3B Has 349 Blast hits to 319 proteins in 89 species: Archae - 0%3B Bacteria - 23%3B Metazoa - 11%3B Fungi - 104%3B Plants - 206%3B Viruses - 0%3B Other Eukaryotes - 5 (source: NCBI BLink). Chr1 + View
Beta vulgaris EL10Ac7g17685 PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED Chr7_EL10_PGA_scaffold5 + View
Corylus avellana Haze_04402 Protein of unknown function 2 - View
Corylus avellana Haze_24705 Protein of unknown function 8 + View
Coffea canephora Cc01_g17800 Plant protein of unknown function (DUF946) chr1 - View
Citrus clementina Ciclev10019502m.g scaffold_3 - View
Carpinus fangiana Cfa006377 Cfa02 + View
Carpinus fangiana Cfa002483 Cfa01 + View
Cardamine hirsuta CARHR003430 Plant protein of unknown function (DUF946) Chr1 + View
Cardamine hirsuta CARHR179420 Plant protein of unknown function (DUF946) Chr6 - View
Carya illinoinensis CiPaw.04G190600 PTHR17204//PTHR17204:SF29 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED Chr04 + View
Carya illinoinensis CiPaw.03G270800 PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED Chr03 + View
Citrullus lanatus ClCG06G001420 Pre-mRNA processing protein PRP39, putative, expressed CG_Chr06 - View
Cucumis melo MELO3C022391.2 Glycogenin-1 chr11 + View
Carica papaya Cpa.g.sc87.27 supercontig_87 + View
Chenopodium quinoa AUR62025441 Protein of unknown function C_Quinoa_Scaffold_2773 - View
Chenopodium quinoa AUR62008798 Protein of unknown function C_Quinoa_Scaffold_1710 + View
Capsella rubella Carub.0001s0324 PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED scaffold_1 + View
Capsella rubella Carub.0008s0460 PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED scaffold_8 + View
Daucus carota DCAR_012589 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv34677 GWHABJS00000010 - View
Durio zibethinus Duzib211G0541 NW_019168049.1 + View
Durio zibethinus Duzib138G1161 NW_019167893.1 + View
Durio zibethinus Duzib177G1043 NW_019168004.1 - View
Eucalyptus grandis Eucgr.K01427 Chr11 - View
Erythranthe guttata Migut.D00476 scaffold_4 + View
Eutrema salsugineum Thhalv10003172m.g PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED scaffold_17 + View
Fragaria x ananassa FAN24G2293 PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED Fvb2-2 + View
Fragaria x ananassa FAN05G0564 PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED Fvb6-3 - View
Fragaria x ananassa FAN05G4751 PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED Fvb6-3 + View
Fragaria x ananassa FAN09G3224 PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED Fvb6-2 - View
Fragaria x ananassa FAN14G2069 PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED Fvb6-1 - View
Fragaria vesca FvH4_2g20520 PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED Fvb2 - View
Fragaria vesca FvH4_6g01580 PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED Fvb6 + View
Gossypium hirsutum Gohir.D11G139600 PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED D11 + View
Gossypium hirsutum Gohir.D11G255600 PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED D11 - View
Gossypium hirsutum Gohir.A11G245450 PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED A11 - View
Gossypium raimondii Gorai.007G149900 Chr07 + View
Gossypium raimondii Gorai.007G274000 Chr07 - View
Lonicera japonica Lj1C74T1 GWHAAZE00000001 + View
Lonicera japonica Lj2C45T6 GWHAAZE00000002 + View
Malus domestica MD10G1176600 Plant protein of unknown function (DUF946) Chr10 - View
Malus domestica MD05G1189000 Plant protein of unknown function (DUF946) Chr05 - View
Manihot esculenta Manes.08G141100 Chromosome08 + View
Manihot esculenta Manes.13G039900 Chromosome13 + View
Manihot esculenta Manes.09G147100 Chromosome09 - View
Manihot esculenta Manes.12G037600 Chromosome12 + View
Nelumbo nucifera Nn3g19790 chr3 + View
Olea europaea Oeu052079.3 chr4 + View
Punica granatum PGR142G4451 NC_045128.1 + View
Prunus persica Prupe.6G351900 PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED Pp06 - View
Populus trichocarpa Potri.014G193100 PTHR17204//PTHR17204:SF29 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED Chr14 + View
Populus trichocarpa Potri.002G256802 PTHR17204//PTHR17204:SF29 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED Chr02 - View
Populus trichocarpa Potri.013G048300 PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED Chr13 + View
Quercus lobata QL09p041378 9 + View
Quercus lobata QL03p029631 3 - View
Rosa chinensis RcHm_v2.0_Chr6g0286641 RcHm_v2.0_Chr6 - View
Rosa chinensis RcHm_v2.0_Chr3g0449321 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim05G0171100 chr05 - View
Rhododendron simsii Rhsim01G0260700 chr01 - View
Striga asiatica SGA_v2.0_scaffold1G00656 scaffold1 + View
Salvia bowleyana SalBow4G3277 GWHASIU00000008 - View
Salix brachista Sabra13G0044400 GWHAAZH00000013 + View
Sechium edule Sed0022586 LG07 + View
Schrenkiella parvula Sp2g08770 PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED ch2-4 - View
Schrenkiella parvula Sp1g02910 PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED ch1-1 + View
Selenicereus undatus Hund05486 Scaffold_19641 + View
Trochodendron aralioides TAR362G1260 group17 + View
Trochodendron aralioides TAR633G1850 group2 - View
Theobroma cacao Thecc.05G267700 Vacuolar protein sorting-associated protein 62 Chromosome_5 - View
Theobroma cacao Thecc.01G250500 Chromosome_1 - View
Tripterygium wilfordii TWI18G0697 NC_052241.1 - View
Vaccinium macrocarpon vmacro14797 Protein of unknown function chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01028430001 chr7 + View