Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0043394 PREDICTED: GDT1-like protein 5 [Elaeis guineensis] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr11.1332 chr11 + View
Actinidia chinensis Actinidia38385 Lachesis_group15 - View
Actinidia chinensis Actinidia16627 Lachesis_group4 + View
Actinidia chinensis Actinidia13670 Lachesis_group10 - View
Actinidia chinensis Actinidia14863 Lachesis_group14 - View
Arabidopsis lyrata AL1G39780 scaffold_1 - View
Avicennia marina MSTRG.2253 ScioBoG_102834_HRSCAF_103055 + View
Avicennia marina MSTRG.13509 ScioBoG_18778_HRSCAF_18863 - View
Aquilegia oxysepala Aqoxy3G00348 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LE8ECZ KOG2881 - Predicted membrane protein arahy.Tifrunner.gnm1.Arahy.19 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UC30TE KOG2881 - Predicted membrane protein arahy.Tifrunner.gnm1.Arahy.09 + View
Arabidopsis thaliana AT1G25520 Uncharacterized protein family (UPF0016) Uncharacterized protein family (UPF0016)%3B INVOLVED IN: response to karrikin%3B LOCATED IN: membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727)%3B BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT1G68650.1)%3B Has 1806 Blast hits to 1733 proteins in 669 species: Archae - 27%3B Bacteria - 1021%3B Metazoa - 159%3B Fungi - 140%3B Plants - 210%3B Viruses - 0%3B Other Eukaryotes - 249 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G68650 Uncharacterized protein family (UPF0016) Uncharacterized protein family (UPF0016)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727)%3B BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT1G25520.1)%3B Has 1855 Blast hits to 1773 proteins in 684 species: Archae - 37%3B Bacteria - 1050%3B Metazoa - 159%3B Fungi - 141%3B Plants - 212%3B Viruses - 0%3B Other Eukaryotes - 256 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC05g26445 ChrC05 - View
Brassica carinata BcaB03g14050 ChrB03 + View
Brassica napus A07p12660 A07 + View
Brassica napus C03p72860 C03 - View
Brassica napus A08p27040 A08 + View
Brassica oleracea BolC7t42391H C7 + View
Brassica oleracea BolC3t19584H C3 - View
Brassica oleracea BolC5t31223H C5 - View
Brassica rapa BraA08t34649Z A08 + View
Brassica rapa BraA09t39451Z A09 + View
Beta vulgaris EL10Ac6g14462 KOG2881 - Predicted membrane protein Chr6_EL10_PGA_scaffold0 + View
Cannabis sativa CANSAT64G1498 NC_044379.1 - View
Cicer arietinum L. Ca_11192_v3 Ca_LG4_v3 + View
Corylus avellana Haze_17451 Similar to At1g25520: GDT1-like protein 4 (Arabidopsis thaliana OX%3D3702) 7 - View
Coffea canephora Cc11_g10470 GDT1-like protein 4 chr11 + View
Citrus clementina Ciclev10032658m.g scaffold_4 + View
Cardamine hirsuta CARHR061460 Transmembrane protein Chr2 + View
Cardamine hirsuta CARHR025940 Transmembrane protein Chr1 - View
Carya illinoinensis CiPaw.15G004500 KOG2881 - Predicted membrane protein Chr15 - View
Carya illinoinensis CiPaw.16G004000 KOG2881 - Predicted membrane protein Chr16 - View
Citrullus lanatus ClCG08G005110 Transmembrane protein CG_Chr08 - View
Cucumis melo MELO3C011548.2 GDT1-like protein 5 chr03 + View
Corchorus olitorius COL.COLO4_07883 hypothetical protein AWUE01013496.1 - View
Carica papaya Cpa.g.sc1.207 supercontig_1 + View
Chenopodium quinoa AUR62035267 At1g68650: GDT1-like protein 5 C_Quinoa_Scaffold_2868 + View
Chenopodium quinoa AUR62002908 At1g68650: GDT1-like protein 5 C_Quinoa_Scaffold_1000 + View
Capsella rubella Carub.0001s2496 PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED scaffold_1 - View
Capsella rubella Carub.0002s1519 PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED scaffold_2 + View
Cucumis sativus L. CsaV3_6G003330 GDT1-like protein chr6 - View
Daucus carota DCAR_030076 hypothetical protein DCARv2_Chr9 + View
Davidia involucrata Dinv21119 GWHABJS00000018 - View
Davidia involucrata Dinv04488 GWHABJS00000008 + View
Durio zibethinus Duzib251G0949 NW_019167971.1 + View
Durio zibethinus Duzib248G0223 NW_019168048.1 - View
Erigeron canadensis ECA233G1121 Conyza_canadensis_scaffold:1 - View
Erigeron canadensis ECA234G3415 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.B03039 Chr02 + View
Eucalyptus grandis Eucgr.G02342 Chr07 + View
Erythranthe guttata Migut.E00316 scaffold_5 - View
Erythranthe guttata Migut.L01090 scaffold_12 + View
Eutrema salsugineum Thhalv10019088m.g PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED scaffold_9 - View
Eutrema salsugineum Thhalv10008674m.g PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED scaffold_5 + View
Fragaria x ananassa FAN07G0105 KOG2881 - Predicted membrane protein Fvb4-4 - View
Fragaria x ananassa FAN22G0038 KOG2881 - Predicted membrane protein Fvb4-1 + View
Fragaria x ananassa FAN12G0469 KOG2881 - Predicted membrane protein Fvb4-3 - View
Fragaria vesca FvH4_4g27780 KOG2881 - Predicted membrane protein Fvb4 + View
Gossypium hirsutum Gohir.A13G053498 KOG2881 - Predicted membrane protein A13 - View
Gossypium hirsutum Gohir.D13G070500 KOG2881 - Predicted membrane protein D13 - View
Glycine max Glyma.20G113400 PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED Gm20 - View
Glycine max Glyma.10G276300 PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED Gm10 + View
Gossypium raimondii Gorai.013G080700 Chr13 - View
Helianthus annuus HanXRQChr08g0214301 Probable uncharacterized protein family (UPF0016) HanXRQChr08 + View
Lupinus albus Lalb_Chr02g0146111 KOG2881 - Predicted membrane protein Lalb_Chr02 + View
Lupinus albus Lalb_Chr06g0166181 KOG2881 - Predicted membrane protein Lalb_Chr06 + View
Lotus japonicus Lj5g0018528 KOG2881 - Predicted membrane protein chr5 - View
Lonicera japonica Lj3A1018T63 GWHAAZE00000003 + View
Lonicera japonica Lj6C762T7 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_8_38801 Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_4_18960 Lsat_1_v8_lg_4 + View
Malus domestica MD13G1045000 Uncharacterized protein family (UPF0016) Chr13 + View
Malus domestica MD16G1046300 Uncharacterized protein family (UPF0016) Chr16 + View
Manihot esculenta Manes.14G098900 Chromosome14 - View
Medicago truncatula Medtr1g111390 transmembrane protein PFT27 chr1 + View
Nicotiana tabacum Nitab4.5_0000672g0130 Uncharacterised protein family UPF0016 Nitab4.5_0000672 - View
Olea europaea Oeu041891.1 scaffold393 - View
Petunia axillaris Peaxi162Scf00380g00710 GDT1-like protein 4 Peaxi162Scf00380 - View
Punica granatum PGR102G1529 NC_045129.1 - View
Prunus persica Prupe.1G306900 Pp01 - View
Pisum sativum Psat6g229680 Uncharacterized protein family UPF0016 chr6LG2 + View
Papaver somniferum PSO478G3555 NC_039361.1 + View
Papaver somniferum PSO017G7358 NC_039362.1 + View
Populus trichocarpa Potri.010G128400 KOG2881 - Predicted membrane protein Chr10 + View
Populus trichocarpa Potri.008G117900 KOG2881 - Predicted membrane protein Chr08 - View
Phaseolus vulgaris Phvul.007G025300 PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED Chr07 - View
Quercus lobata QL01p044656 1 + View
Rosa chinensis RcHm_v2.0_Chr4g0435641 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim09G0111000 chr09 + View
Striga asiatica SGA_v2.0_scaffold170G38747 scaffold170 - View
Salvia bowleyana SalBow8G2850 GWHASIU00000004 + View
Salvia bowleyana SalBow8G1991 GWHASIU00000004 + View
Salix brachista Sabra10G0097600 GWHAAZH00000010 + View
Salix brachista Sabra08G0089400 GWHAAZH00000008 - View
Simmondsia chinensis Sc11g0003180 GWHAASQ00000011 - View
Sechium edule Sed0017076 LG03 - View
Sechium edule Sed0015668 LG11 + View
Solanum lycopersicum Solyc05g009690.3 GDT1-like protein 5 (AHRD V3.3 *** A0A2G2V9V8_CAPBA) SL4.0ch05 + View
Schrenkiella parvula Sp5g23750 KOG2881 - Predicted membrane protein ch5-6 + View
Schrenkiella parvula Sp1g22690 KOG2881 - Predicted membrane protein ch1-1 - View
Solanum pennellii Sopen05g005510 Uncharacterized protein family (UPF0016) | INVOLVED IN: response to karrikin | LOCATED IN: membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 | BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) Spenn-ch05 + View
Solanum tuberosum PGSC0003DMG400000829 Transmembrane protein TPARL ST4.03ch05 - View
Selenicereus undatus Hund25091 Scaffold_3410 + View
Trochodendron aralioides TAR622G0461 group8 + View
Theobroma cacao Thecc.02G359300 GDT1-like protein 4 Chromosome_2 + View
Tarenaya hassleriana THA.LOC104821955 GDT1-like protein 5 NW_010966617.1 + View
Trifolium pratense TPR.G26291 Tp57577_TGAC_v2_LG1 - View
Tripterygium wilfordii TWI31G0096 NC_052233.1 + View
Tripterygium wilfordii TWI75G0072 NC_052253.1 + View
Tripterygium wilfordii TWI79G1043 NC_052238.1 + View
Vaccinium macrocarpon vmacro10539 Similar to At1g25520: GDT1-like protein 4 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G2569 CM024071.1 + View
Vitis vinifera GSVIVG01011934001 chr1 - View