Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0026712 PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Vitis vinifera] Chr9 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G2550 LG-5 + View
Aethionema arabicum Aa31LG1G9200 LG-1 - View
Acer truncatum Atru.chr5.1325 chr5 - View
Actinidia chinensis Actinidia23452 Lachesis_group3 - View
Arabidopsis lyrata AL1G12890 scaffold_1 + View
Arabidopsis lyrata AL6G49930 scaffold_6 - View
Avicennia marina MSTRG.3972 ScioBoG_102837_HRSCAF_103074 - View
Avicennia marina MSTRG.17431 ScioBoG_19834_HRSCAF_19925 - View
Aquilegia oxysepala Aqoxy2G03184 CHR02 - View
Aquilegia oxysepala Aqoxy5G00567 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.099TXP PTHR10044:SF98 - DETERIN arahy.Tifrunner.gnm1.Arahy.14 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QC7G13 PTHR10044:SF98 - DETERIN arahy.Tifrunner.gnm1.Arahy.12 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2K35VF PTHR10044:SF98 - DETERIN arahy.Tifrunner.gnm1.Arahy.02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SWT1V1 PTHR10044:SF98 - DETERIN arahy.Tifrunner.gnm1.Arahy.04 - View
Arabidopsis thaliana AT1G03365 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G03000.2). Chr1 + View
Arabidopsis thaliana AT4G03000 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G03365.1)%3B Has 47741 Blast hits to 30371 proteins in 2147 species: Archae - 425%3B Bacteria - 7273%3B Metazoa - 21635%3B Fungi - 3461%3B Plants - 2162%3B Viruses - 230%3B Other Eukaryotes - 12555 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaC03g16192 ChrC03 + View
Brassica carinata BcaB01g01991 ChrB01 - View
Brassica carinata BcaC05g24535 ChrC05 - View
Brassica napus A10p01920 A10 + View
Brassica napus C09p02430 C09 + View
Brassica napus C02p39740 C02 + View
Brassica napus A09p02320 A09 + View
Brassica oleracea BolC9t53174H C9 + View
Brassica oleracea BolC5t28967H C5 + View
Brassica oleracea BolC2t09989H C2 + View
Brassica rapa BraA09t35881Z A09 + View
Brassica rapa BraA10t42465Z A10 + View
Cicer arietinum L. Ca_10393_v3 Ca_LG4_v3 - View
Cicer arietinum L. Ca_00588_v3 Ca_LG1_v3 - View
Corylus avellana Haze_04774 Similar to RF298: Putative E3 ubiquitin-protein ligase RF298 (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc03_g02740 Putative E3 ubiquitin-protein ligase RF298 chr3 - View
Citrus clementina Ciclev10004269m.g scaffold_9 - View
Citrus clementina Ciclev10018843m.g scaffold_3 + View
Carpinus fangiana Cfa006077 Cfa02 + View
Cardamine hirsuta CARHR251390 Baculoviral IAP repeat-containing protein Chr8 + View
Cardamine hirsuta CARHR002740 Baculoviral IAP repeat-containing protein Chr1 + View
Carya illinoinensis CiPaw.07G096400 PTHR10044//PTHR10044:SF98 - INHIBITOR OF APOPTOSIS // DETERIN Chr07 + View
Carya illinoinensis CiPaw.02G089400 PTHR10044:SF98 - DETERIN Chr02 - View
Carya illinoinensis CiPaw.01G156700 KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase Chr01 - View
Citrullus lanatus ClCG05G005580 Baculoviral IAP repeat-containing protein CG_Chr05 + View
Cucumis melo MELO3C006584.2 RING/U-box superfamily protein, putative isoform 1 chr06 + View
Carica papaya Cpa.g.sc16.73 supercontig_16 + View
Carica papaya Cpa.g.sc9.133 supercontig_9 + View
Capsella rubella Carub.0001s0249 PTHR10044:SF98 - DETERIN scaffold_1 + View
Capsella rubella Carub.0006s3405 PTHR10044:SF98 - DETERIN scaffold_6 - View
Cucumis sativus L. CsaV3_3G013920 E3 ubiquitin-protein like chr3 + View
Daucus carota DCAR_027130 hypothetical protein DCARv2_Chr8 + View
Daucus carota DCAR_002763 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv38350 GWHABJS00000016 + View
Davidia involucrata Dinv32972 GWHABJS00000010 + View
Erigeron canadensis ECA236G3531 Conyza_canadensis_scaffold:3 + View
Erythranthe guttata Migut.G00238 scaffold_7 - View
Erythranthe guttata Migut.N02135 scaffold_14 - View
Eutrema salsugineum Thhalv10028432m.g KOG1853 - LIS1-interacting protein NUDE scaffold_3 + View
Eutrema salsugineum Thhalv10006805m.g PTHR10044:SF98 - DETERIN scaffold_5 - View
Fragaria x ananassa FAN20G0897 KOG1100//KOG4172 - Predicted E3 ubiquitin ligase // Predicted E3 ubiquitin ligase Fvb2-3 - View
Fragaria x ananassa FAN12G1926 PTHR10044:SF98 - DETERIN Fvb4-3 + View
Fragaria x ananassa FAN07G0666 PTHR10044//PTHR10044:SF98 - INHIBITOR OF APOPTOSIS // DETERIN Fvb4-4 - View
Fragaria x ananassa FAN22G0914 PTHR10044//PTHR10044:SF98 - INHIBITOR OF APOPTOSIS // DETERIN Fvb4-1 + View
Fragaria x ananassa FAN17G2250 PTHR10044//PTHR10044:SF98 - INHIBITOR OF APOPTOSIS // DETERIN Fvb4-2 - View
Fragaria x ananassa FAN15G1197 KOG4172//KOG4687 - Predicted E3 ubiquitin ligase // Uncharacterized coiled-coil protein Fvb2-4 + View
Fragaria x ananassa FAN24G2124 KOG1100//KOG4172 - Predicted E3 ubiquitin ligase // Predicted E3 ubiquitin ligase Fvb2-2 - View
Fragaria x ananassa FAN27G1621 KOG1100//KOG4172 - Predicted E3 ubiquitin ligase // Predicted E3 ubiquitin ligase Fvb2-1 + View
Fragaria vesca FvH4_2g24221 KOG1100//KOG4172 - Predicted E3 ubiquitin ligase // Predicted E3 ubiquitin ligase Fvb2 + View
Gossypium hirsutum Gohir.D12G006200 PTHR10044:SF98 - DETERIN D12 + View
Gossypium hirsutum Gohir.A12G006800 PTHR10044:SF98 - DETERIN A12 + View
Glycine max Glyma.15G100500 KOG1003//KOG2991//KOG4172 - Actin filament-coating protein tropomyosin // Splicing regulator // Predicted E3 ubiquitin ligase Gm15 - View
Glycine max Glyma.02G150400 PTHR10044:SF98 - DETERIN Gm02 + View
Glycine max Glyma.17G020500 KOG2991//KOG4172 - Splicing regulator // Predicted E3 ubiquitin ligase Gm17 + View
Glycine max Glyma.07G253800 KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase Gm07 - View
Glycine max Glyma.13G212200 KOG1003//KOG2991//KOG4172 - Actin filament-coating protein tropomyosin // Splicing regulator // Predicted E3 ubiquitin ligase Gm13 + View
Gossypium raimondii Gorai.008G006200 Chr08 + View
Hydrangea macrophylla Hma1.2p1_0643F.1_g194490 Hma1.2p1_0643F.1 + View
Hydrangea macrophylla Hma1.2p1_2318F.1_g319770 Hma1.2p1_2318F.1 - View
Lupinus albus Lalb_Chr02g0142931 PTHR10044//PTHR10044:SF98 - INHIBITOR OF APOPTOSIS // DETERIN Lalb_Chr02 + View
Lupinus albus Lalb_Chr06g0163191 PTHR10044//PTHR10044:SF98 - INHIBITOR OF APOPTOSIS // DETERIN Lalb_Chr06 + View
Lotus japonicus Lj4g0005654 KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase chr4 + View
Lotus japonicus Lj5g0028215 KOG1100//KOG4172 - Predicted E3 ubiquitin ligase // Predicted E3 ubiquitin ligase chr5 + View
Lonicera japonica Lj1A42T61 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_8_55580 PTHR10044:SF98 - DETERIN Lsat_1_v8_lg_8 - View
Magnolia biondii MBI19_g34709_MAGBIO AED:0.04 Chr19 + View
Magnolia biondii MBI17_g12080_MAGBIO AED:0.00 Chr17 + View
Malus domestica MD03G1272000 RING/U-box superfamily protein Chr03 + View
Malus domestica MD16G1179600 RING/U-box superfamily protein Chr16 - View
Malus domestica MD11G1292600 RING/U-box superfamily protein Chr11 + View
Malus domestica MD13G1177600 RING/U-box superfamily protein Chr13 - View
Manihot esculenta Manes.01G211400 Chromosome01 + View
Manihot esculenta Manes.15G020100 Chromosome15 - View
Manihot esculenta Manes.03G188200 Chromosome03 + View
Medicago truncatula Medtr2g020870 E3 ubiquitin-protein ligase RF298-like protein, putative chr2 - View
Medicago truncatula Medtr1g089740 E3 ubiquitin-protein ligase RF298-like protein, putative chr1 - View
Nelumbo nucifera Nn3g21182 chr3 + View
Nicotiana tabacum Nitab4.5_0001323g0120 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0001323 + View
Nicotiana tabacum Nitab4.5_0000295g0160 Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-type Nitab4.5_0000295 - View
Nicotiana tabacum Nitab4.5_0004238g0010 Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-type Nitab4.5_0004238 + View
Olea europaea Oeu001443.1 scaffold1040 + View
Olea europaea Oeu011182.2 scaffold1424 + View
Petunia axillaris Peaxi162Scf00095g00415 RING/U-box superfamily protein Peaxi162Scf00095 - View
Prunus persica Prupe.8G248200 Pp08 + View
Pisum sativum Psat1g185680 Zinc finger + C3HC4 type (RING finger) chr1LG6 + View
Papaver somniferum PSO210G1685 NC_039359.1 - View
Populus trichocarpa Potri.008G198300 PTHR10044:SF98 - DETERIN Chr08 - View
Populus trichocarpa Potri.010G027900 PTHR10044:SF98 - DETERIN Chr10 - View
Phaseolus vulgaris Phvul.006G158500 Chr06 + View
Phaseolus vulgaris Phvul.007G168300 Chr07 - View
Quercus lobata QL12p023040 12 + View
Quercus lobata QL06p006206 6 + View
Rosa chinensis RcHm_v2.0_Chr6g0292011 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim13G0020900 chr13 - View
Rhododendron simsii Rhsim04G0212500 chr04 - View
Rhododendron simsii Rhsim02G0016800 chr02 - View
Striga asiatica SGA_v2.0_scaffold36G14374 scaffold36 - View
Striga asiatica SGA_v2.0_scaffold172G39042 scaffold172 + View
Salvia bowleyana SalBow6G0084 GWHASIU00000002 - View
Salix brachista Sabra08G0162100 GWHAAZH00000008 + View
Salix brachista Sabra10G0012800 GWHAAZH00000010 + View
Simmondsia chinensis Sc19g0004750 GWHAASQ00000019 - View
Solanum lycopersicum Solyc06g008900.4 RING/U-box superfamily protein (AHRD V3.3 *** A0A1P8B7R8_ARATH) SL4.0ch06 - View
Solanum lycopersicum Solyc09g074120.3 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1LIK0_ARTAN) SL4.0ch09 + View
Solanum lycopersicum Solyc01g080430.4 RING/U-box superfamily protein (AHRD V3.3 *** A0A1P8B7R8_ARATH) SL4.0ch01 + View
Schrenkiella parvula Sp1g02370 PTHR10044:SF98 - DETERIN ch1-1 + View
Schrenkiella parvula Sp6g03040 PTHR10044//PTHR10044:SF98 - INHIBITOR OF APOPTOSIS // DETERIN ch6-1 + View
Solanum pennellii Sopen09g028940 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein . Spenn-ch09 + View
Solanum pennellii Sopen01g032240 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400032108 Conserved gene of unknown function ST4.03ch01 - View
Solanum tuberosum PGSC0003DMG400003810 Nutrient reservoir ST4.03ch09 + View
Trochodendron aralioides TAR636G2290 group1 + View
Trochodendron aralioides TAR362G1042 group17 - View
Theobroma cacao Thecc.04G272500 RING/U-box superfamily protein Chromosome_4 + View
Theobroma cacao Thecc.01G286200 Chromosome_1 + View
Tarenaya hassleriana THA.LOC104826005 putative E3 ubiquitin-protein ligase RF298 NW_010967707.1 + View
Tarenaya hassleriana THA.LOC104801211 putative E3 ubiquitin-protein ligase RF298 NW_010969548.1 - View
Trifolium pratense TPR.G13294 Tp57577_TGAC_v2_LG1 - View
Tripterygium wilfordii TWI73G0410 NC_052232.1 - View
Vaccinium macrocarpon vmacro08240 Similar to RF298: Putative E3 ubiquitin-protein ligase RF298 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro02535 Similar to RF298: Putative E3 ubiquitin-protein ligase RF298 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro15288 Similar to RF298: Putative E3 ubiquitin-protein ligase RF298 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G1600 CM024074.1 - View
Vigna mungo VMungo0720G1788 CM024071.1 + View