Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G7170 LG-11 + View
Acer truncatum Atru.chr3.3170 chr3 - View
Acer truncatum Atru.chr8.1439 chr8 - View
Arabidopsis lyrata AL6G16210 scaffold_6 + View
Avicennia marina MSTRG.5866 ScioBoG_102839_HRSCAF_103093 + View
Avicennia marina MSTRG.19278 ScioBoG_25048_HRSCAF_25167 + View
Aquilegia oxysepala Aqoxy4G02719 CHR04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.K9FAKX K13195 - cold-inducible RNA-binding protein (CIRBP) arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.S43GAM K13195 - cold-inducible RNA-binding protein (CIRBP) arahy.Tifrunner.gnm1.Arahy.16 + View
Arabidopsis thaliana AT5G06210 RNA binding (RRM/RBD/RNP motifs) family protein Encodes a chloroplast protein involved in the responses to salt and oxidative stresses. RNA binding (RRM/RBD/RNP motifs) family protein%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C glycine rich protein (InterPro:IPR015465)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 (TAIR:AT1G74230.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Beta vulgaris EL10Ac7g16847 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Chr7_EL10_PGA_scaffold5 - View
Cannabis sativa CANSAT64G2300 NC_044379.1 - View
Corylus avellana Haze_23348 Similar to S-RBP11: Small RNA-binding protein 11, chloroplastic (Arabidopsis thaliana OX%3D3702) 6 - View
Coffea canephora Cc06_g06210 Putative glycine-rich RNA-binding protein 3 chr6 + View
Citrus clementina Ciclev10029552m.g scaffold_8 - View
Citrus clementina Ciclev10012994m.g scaffold_6 - View
Carpinus fangiana Cfa016650 Cfa07 + View
Cardamine hirsuta CARHR206910 RNA binding protein, putative Chr6 + View
Carya illinoinensis CiPaw.13G133000 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Chr13 - View
Carya illinoinensis CiPaw.09G017600 K13195 - cold-inducible RNA-binding protein (CIRBP) Chr09 + View
Citrullus lanatus ClCG10G018700 RNA binding protein, putative CG_Chr10 - View
Cucumis melo MELO3C009496.2 RNA-binding glycine rich protein chr04 - View
Corchorus olitorius COL.COLO4_29667 hypothetical protein AWUE01020390.1 - View
Carica papaya Cpa.g.sc104.89 supercontig_104 - View
Chenopodium quinoa AUR62028480 RBG4: Glycine-rich RNA-binding protein 4, mitochondrial C_Quinoa_Scaffold_3100 + View
Capsella rubella Carub.0008s2055 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) scaffold_8 + View
Capsella rubella Carub.0006s0508 K13195 - cold-inducible RNA-binding protein (CIRBP) scaffold_6 + View
Cucumis sativus L. CsaV3_3G037530 RNA binding protein, putative chr3 + View
Davidia involucrata Dinv21163 GWHABJS00000021 - View
Durio zibethinus Duzib150G0760 NW_019167882.1 + View
Durio zibethinus Duzib093G1727 NW_019167937.1 - View
Durio zibethinus Duzib128G2013 NW_019168481.1 - View
Eucalyptus grandis Eucgr.K02572 Chr11 - View
Erythranthe guttata Migut.J00999 scaffold_10 - View
Eutrema salsugineum Thhalv10014928m.g K13195 - cold-inducible RNA-binding protein (CIRBP) scaffold_2 + View
Fragaria x ananassa FAN05G0907 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Fvb6-3 + View
Fragaria x ananassa FAN14G0241 K13195 - cold-inducible RNA-binding protein (CIRBP) Fvb6-1 - View
Fragaria x ananassa FAN09G0862 K13195 - cold-inducible RNA-binding protein (CIRBP) Fvb6-2 - View
Fragaria vesca FvH4_6g19520 K13195 - cold-inducible RNA-binding protein (CIRBP) Fvb6 + View
Gossypium hirsutum Gohir.D09G133200 KOG0121 - Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) D09 - View
Gossypium hirsutum Gohir.A09G141500 KOG0121 - Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) A09 + View
Glycine max Glyma.03G198500 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Gm03 + View
Gossypium raimondii Gorai.006G152700 Chr06 - View
Hydrangea macrophylla Hma1.2p1_0820F.1_g224080 Hma1.2p1_0820F.1 + View
Lupinus albus Lalb_Chr20g0111561 K13195 - cold-inducible RNA-binding protein (CIRBP) Lalb_Chr20 - View
Lotus japonicus Lj1g0014206 K13195 - cold-inducible RNA-binding protein (CIRBP) chr1 - View
Malus domestica MD03G1149700 RNA-binding (RRM/RBD/RNP motifs) family protein Chr03 + View
Malus domestica MD14G1031800 RNA binding (RRM/RBD/RNP motifs) family protein Chr14 + View
Manihot esculenta Manes.09G051700 Chromosome09 - View
Manihot esculenta Manes.11G164200 Chromosome11 + View
Medicago truncatula Medtr7g105260 RNA-binding (RRM/RBD/RNP motif) family protein chr7 + View
Nelumbo nucifera Nn2g14228 chr2 + View
Oryza sativa ssp. japonica Os04g0414300 Similar to H0622F05.1 protein. chr04 + View
Petunia axillaris Peaxi162Scf00096g00086 RNA-binding family protein Peaxi162Scf00096 + View
Punica granatum PGR142G1864 NC_045128.1 + View
Prunus persica Prupe.7G101000 K13195 - cold-inducible RNA-binding protein (CIRBP) Pp07 - View
Pisum sativum Psat3g031000 RNA recognition motif. (a.k.a. RRM + RBD + or RNP domain) chr3LG5 - View
Papaver somniferum PSO384G2637 NC_039368.1 + View
Papaver somniferum PSO339G5744 NC_039366.1 - View
Populus trichocarpa Potri.006G208500 K13195 - cold-inducible RNA-binding protein (CIRBP) Chr06 - View
Populus trichocarpa Potri.009G160300 K13195 - cold-inducible RNA-binding protein (CIRBP) Chr09 + View
Phaseolus vulgaris Phvul.001G192800 PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Chr01 + View
Quercus lobata QL07p038106 7 - View
Rosa chinensis RcHm_v2.0_Chr3g0474861 RcHm_v2.0_Chr3 + View
Salvia bowleyana SalBow3G4272 GWHASIU00000006 - View
Salix brachista Sabra06G0160400 GWHAAZH00000006 - View
Simmondsia chinensis Sc20g0006550 GWHAASQ00000020 + View
Sechium edule Sed0002687 LG04 + View
Solanum lycopersicum Solyc10g083240.2 RNA-binding protein (AHRD V3.3 *-* Q941H9_TOBAC) SL4.0ch10 - View
Schrenkiella parvula Sp6g36670 K13195 - cold-inducible RNA-binding protein (CIRBP) ch6-6 - View
Solanum pennellii Sopen10g032720 RNA binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, glycine rich protein , RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: glycine-rich RNA-binding protein 5 Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400028248 RNA binding protein ST4.03ch10 + View
Trochodendron aralioides TAR623G0690 group7 + View
Theobroma cacao Thecc.05G095900 RNA binding family protein Chromosome_5 + View
Theobroma cacao Thecc.09G279000 RNA-binding family protein Chromosome_9 - View
Trifolium pratense TPR.G23347 Tp57577_TGAC_v2_LG6 - View
Tripterygium wilfordii TWI53G0104 NC_052244.1 - View
Vaccinium macrocarpon vmacro07433 Similar to S-RBP11: Small RNA-binding protein 11, chloroplastic (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G0483 CM024070.1 + View
Vitis vinifera GSVIVG01033897001 chr8 - View
Vitis vinifera GSVIVG01036082001 chr6 + View