Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0048245 PREDICTED: pentatricopeptide repeat-containing protein At3g53360, mitochondrial-like [Nicotiana sylvestris] Chr7 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G12790 LG-1 - View
Acer truncatum Atru.chr12.990 chr12 - View
Actinidia chinensis Actinidia07235 Lachesis_group13 + View
Actinidia chinensis Actinidia24203 Lachesis_group24 + View
Arabidopsis lyrata AL4G22790 scaffold_4 + View
Avicennia marina MSTRG.18748 ScioBoG_22153_HRSCAF_22259 + View
Aquilegia oxysepala Aqoxy2G01315 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LB0VDM PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) arahy.Tifrunner.gnm1.Arahy.18 + View
Arabidopsis thaliana AT2G27610 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1)%3B Has 54594 Blast hits to 14874 proteins in 305 species: Archae - 2%3B Bacteria - 30%3B Metazoa - 158%3B Fungi - 263%3B Plants - 53396%3B Viruses - 0%3B Other Eukaryotes - 745 (source: NCBI BLink). Chr2 - View
Amborella trichopoda ATR0820G295 AmTr_v1.0_scaffold00040 + View
Brassica napus A04p21050 A04 - View
Brassica oleracea BolC9t58240H C9 - View
Brassica oleracea BolC9t55946H C9 - View
Brassica rapa BraA04t17673Z A04 - View
Cannabis sativa CANSAT54G0791 NC_044375.1 + View
Corylus avellana Haze_02574 Similar to PCMP-H84: Putative pentatricopeptide repeat-containing protein At3g08820 (Arabidopsis thaliana OX%3D3702) 1 + View
Coffea canephora Cc02_g09890 Putative Pentatricopeptide repeat-containing protein At2g27610 chr2 + View
Coffea canephora Cc01_g09430 Pentatricopeptide repeat-containing protein At2g27610 chr1 - View
Citrus clementina Ciclev10028146m.g scaffold_8 - View
Citrus clementina Ciclev10030857m.g scaffold_4 + View
Ceratophyllum demersum CDE06G0871 4 + View
Carpinus fangiana Cfa011252 Cfa04 - View
Cardamine hirsuta CARHR120230 Pentatricopeptide repeat-containing protein Chr4 - View
Carya illinoinensis CiPaw.13G038100 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Chr13 - View
Chenopodium quinoa AUR62009781 PCMP-H60: Pentatricopeptide repeat-containing protein At2g27610 C_Quinoa_Scaffold_2493 - View
Capsella rubella Carub.0004s0827 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_4 - View
Durio zibethinus Duzib150G0404 NW_019167882.1 + View
Eucalyptus grandis Eucgr.K02049 Chr11 - View
Erythranthe guttata Migut.D02351 scaffold_4 + View
Eutrema salsugineum Thhalv10017649m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_10 + View
Fragaria x ananassa FAN16G2182 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb3-3 - View
Fragaria x ananassa FAN25G0216 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb3-1 + View
Fragaria x ananassa FAN05G1177 PF13041 - PPR repeat family (PPR_2) Fvb6-3 - View
Gossypium hirsutum Gohir.D09G095500 PF00646//PF01535//PF13041 - F-box domain (F-box) // PPR repeat (PPR) // PPR repeat family (PPR_2) D09 - View
Gossypium hirsutum Gohir.A09G095800 PF00646//PF01535//PF13041 - F-box domain (F-box) // PPR repeat (PPR) // PPR repeat family (PPR_2) A09 - View
Gossypium hirsutum Gohir.D04G018100 PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D04 + View
Gossypium hirsutum Gohir.D07G112600 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) D07 + View
Gossypium hirsutum Gohir.A07G108800 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) A07 + View
Glycine max Glyma.13G317366 PF13041 - PPR repeat family (PPR_2) Gm13 - View
Glycine max Glyma.12G183600 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm12 + View
Gossypium raimondii Gorai.012G021300 Chr12 + View
Gossypium raimondii Gorai.006G112200 Chr06 - View
Gossypium raimondii Gorai.001G121000 Chr01 + View
Lupinus albus Lalb_Chr03g0027671 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Lalb_Chr03 - View
Lotus japonicus Lj3g0023067 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) chr3 + View
Lonicera japonica Lj2C30T11 GWHAAZE00000002 - View
Magnolia biondii MBI01_g11648_MAGBIO AED:0.12 Chr01 - View
Malus domestica MD11G1161500 Tetratricopeptide repeat (TPR)-like superfamily protein Chr11 - View
Manihot esculenta Manes.11G160300 Chromosome11 + View
Olea europaea Oeu058276.1 scaffold775 - View
Pisum sativum Psat5g256600 DYW family of nucleic acid deaminases chr5LG3 + View
Papaver somniferum PSO384G0742 NC_039368.1 - View
Populus trichocarpa Potri.004G184800 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr04 - View
Phaseolus vulgaris Phvul.011G091750 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr11 + View
Phaseolus vulgaris Phvul.007G225800 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr07 + View
Rosa chinensis RcHm_v2.0_Chr5g0043961 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim01G0211200 chr01 + View
Salix brachista Sabra09G0112200 GWHAAZH00000009 - View
Salix brachista Sabra04G0124600 GWHAAZH00000004 - View
Simmondsia chinensis Sc12g0003960 GWHAASQ00000012 - View
Simmondsia chinensis Sc12g0004400 GWHAASQ00000012 + View
Solanum lycopersicum Solyc11g066920.1 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0VP48_9ASPA) SL4.0ch11 - View
Solanum lycopersicum Solyc08g061320.3 Polyadenylate-binding protein-interacting protein 7 (AHRD V3.3 *** A0A2G3BRE1_CAPCH) SL4.0ch08 - View
Schrenkiella parvula Sp6g22450 PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED ch6-6 - View
Schrenkiella parvula Sp4g10430 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch4-6 - View
Solanum pennellii Sopen11g026640 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch11 - View
Solanum tuberosum PGSC0003DMG400041603 Gene of unknown function ST4.03ch11 - View
Trochodendron aralioides TAR633G0689 group2 - View
Theobroma cacao Thecc.09G286300 Tetratricopeptide repeat (TPR)-like superfamily protein Chromosome_9 - View
Tarenaya hassleriana THA.LOC104800581 probable glucuronoxylan glucuronosyltransferase IRX7 NW_010969548.1 + View
Tripterygium wilfordii TWI79G1423 NC_052238.1 + View
Vigna mungo VMungo1080G0296 CM024079.1 + View
Vigna mungo VMungo1127G1684 CM024076.1 + View
Vitis vinifera GSVIVG01036186001 chr6 + View