Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0018951 PREDICTED: transcription factor SPATULA isoform X1 [Vitis vinifera] Chr4 - View
CSS0010903 unnamed protein product [Vitis vinifera] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G14050 LG-6 - View
Acer truncatum Atru.chr3.304 chr3 + View
Acer truncatum Atru.chr13.723 chr13 - View
Actinidia chinensis Actinidia22645 Lachesis_group28 - View
Actinidia chinensis Actinidia01096 Lachesis_group26 - View
Actinidia chinensis Actinidia16476 Lachesis_group25 - View
Actinidia chinensis Actinidia38064 Lachesis_group7 - View
Arabidopsis lyrata AL7G13690 scaffold_7 + View
Arabidopsis lyrata AL8G44250 scaffold_8 + View
Amaranthus hybridus Ah.03g145510 Transcription factor SPATULA (Basic helix-loop-helix protein 24) (AtbHLH24) (bHLH 24) (Transcription factor EN 99) (bHLH transcription factor bHLH024) AmaHy_arrow1_Scaffold_3 + View
Aquilegia oxysepala Aqoxy5G01196 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.N3DKS3 PTHR12565//PTHR12565:SF177 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.90DV49 PTHR12565//PTHR12565:SF177 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT4G36930 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a transcription factor of the bHLH protein family. Mutants have abnormal%2C unfused carpels and reduced seed dormancy. SPATULA (SPT)%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G67110.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT5G67110 basic helix-loop-helix (bHLH) DNA-binding superfamily protein encodes a myc/bHLH transcription factor-like protein. Gene product is involved in fruit dehiscence. Mutant siliques fail to dehisce. ALCATRAZ (ALC)%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G36930.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC06g34791 ChrC06 - View
Brassica carinata BcaNung02524 Contig886 - View
Brassica napus A01p01800 A01 + View
Brassica napus C01p01940 C01 + View
Brassica napus A07p16850 A07 + View
Brassica napus C07p24660 C07 + View
Brassica oleracea BolC7t42986H C7 + View
Brassica oleracea BolC1t00188H C1 + View
Brassica rapa BraA07t29410Z A07 + View
Brassica rapa BraA01t00170Z A01 + View
Beta vulgaris EL10As7g23747 PTHR12565//PTHR12565:SF92 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR SPATULA Scaffold_0007 - View
Beta vulgaris EL10Ac6g15728 KOG2483 - Upstream transcription factor 2/L-myc-2 protein Chr6_EL10_PGA_scaffold0 + View
Capsicum annuum CAN.G370.46 PGAv.1.6.scaffold370 + View
Cicer arietinum L. Ca_13283_v3 Ca_LG4_v3 + View
Cicer arietinum L. Ca_24757_v3 Ca_LG8_v3 + View
Corylus avellana Haze_15379 Similar to SPT: Transcription factor SPATULA (Arabidopsis thaliana OX%3D3702) 11 + View
Corylus avellana Haze_18036 Similar to SPT: Transcription factor SPATULA (Arabidopsis thaliana OX%3D3702) 7 - View
Coffea canephora Cc10_g04630 Putative uncharacterized protein chr10 - View
Coffea canephora Cc07_g06130 Putative uncharacterized protein chr7 - View
Citrus clementina Ciclev10025735m.g scaffold_7 - View
Cardamine hirsuta CARHR280540 Transcription factor Chr8 + View
Cardamine hirsuta CARHR245580 Transcription factor Chr7 - View
Carya illinoinensis CiPaw.01G016500 PTHR12565//PTHR12565:SF87 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR ALC-RELATED Chr01 + View
Carya illinoinensis CiPaw.15G054600 PTHR12565:SF92 - TRANSCRIPTION FACTOR SPATULA Chr15 + View
Citrullus lanatus ClCG01G016910 BHLH transcription factor CG_Chr01 - View
Citrullus lanatus ClCG08G016090 BHLH transcription factor CG_Chr08 - View
Cucumis melo MELO3C007570.2 transcription factor SPATULA chr08 - View
Cucumis melo MELO3C010843.2 transcription factor SPATULA-like chr03 - View
Carica papaya Cpa.g.sc55.132 supercontig_55 + View
Carica papaya Cpa.g.sc21.176 supercontig_21 + View
Chenopodium quinoa AUR62001913 SPT: Transcription factor SPATULA C_Quinoa_Scaffold_4480 + View
Chenopodium quinoa AUR62003896 ALC: Transcription factor ALC C_Quinoa_Scaffold_2370 - View
Capsella rubella Carub.0007s0311 PTHR12565:SF92 - TRANSCRIPTION FACTOR SPATULA scaffold_7 + View
Capsella rubella Carub.0008s2740 PTHR12565//PTHR12565:SF87 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR ALC-RELATED scaffold_8 + View
Cucumis sativus L. CsaV3_6G043370 transcription factor SPATULA chr6 - View
Cucumis sativus L. CsaV3_2G026540 transcription factor SPATULA-like chr2 + View
Davidia involucrata Dinv35940 GWHABJS00000002 + View
Davidia involucrata Dinv30001 GWHABJS00000503 - View
Davidia involucrata Dinv26837 GWHABJS00000014 - View
Durio zibethinus Duzib187G0566 NW_019167860.1 + View
Durio zibethinus Duzib116G0087 NW_019167949.1 - View
Durio zibethinus Duzib093G1045 NW_019167937.1 + View
Durio zibethinus Duzib264G1235 NW_019167960.1 + View
Durio zibethinus Duzib147G1372 NW_019168470.1 + View
Erigeron canadensis ECA232G4876 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA238G0231 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.I00906 Chr09 + View
Erythranthe guttata Migut.N02749 scaffold_14 + View
Erythranthe guttata Migut.C00561 scaffold_3 + View
Erythranthe guttata Migut.H00420 scaffold_8 + View
Eutrema salsugineum Thhalv10004889m.g PTHR12565:SF87 - TRANSCRIPTION FACTOR ALC-RELATED scaffold_6 - View
Eutrema salsugineum Thhalv10025554m.g PTHR12565:SF92 - TRANSCRIPTION FACTOR SPATULA scaffold_1 + View
Fragaria x ananassa FAN19G1420 PTHR12565:SF92 - TRANSCRIPTION FACTOR SPATULA Fvb1-4 - View
Fragaria x ananassa FAN20G1444 PTHR12565//PTHR12565:SF92 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR SPATULA Fvb2-3 - View
Fragaria x ananassa FAN28G2570 PTHR12565:SF92 - TRANSCRIPTION FACTOR SPATULA Fvb1-1 + View
Fragaria x ananassa FAN15G1551 PTHR12565//PTHR12565:SF92 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR SPATULA Fvb2-4 + View
Fragaria x ananassa FAN26G2157 PTHR12565:SF92 - TRANSCRIPTION FACTOR SPATULA Fvb1-2 - View
Fragaria x ananassa FAN27G3232 PTHR12565//PTHR12565:SF92 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR SPATULA Fvb2-1 + View
Fragaria x ananassa FAN24G0731 PTHR12565//PTHR12565:SF92 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR SPATULA Fvb2-2 - View
Fragaria vesca FvH4_1g16230 PTHR12565:SF92 - TRANSCRIPTION FACTOR SPATULA Fvb1 - View
Fragaria vesca FvH4_2g34100 PTHR12565//PTHR12565:SF87 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR ALC-RELATED Fvb2 + View
Gossypium hirsutum Gohir.A05G204000 PTHR12565:SF92 - TRANSCRIPTION FACTOR SPATULA A05 - View
Gossypium hirsutum Gohir.A11G193400 PTHR12565//PTHR12565:SF177//PTHR12565:SF87 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED // TRANSCRIPTION FACTOR ALC-RELATED A11 - View
Gossypium hirsutum Gohir.A12G072400 PTHR12565//PTHR12565:SF177 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED A12 - View
Gossypium hirsutum Gohir.D05G207200 PTHR12565:SF92 - TRANSCRIPTION FACTOR SPATULA D05 - View
Gossypium hirsutum Gohir.D11G200500 PTHR12565//PTHR12565:SF87 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR ALC-RELATED D11 - View
Gossypium hirsutum Gohir.D12G070301 PTHR12565//PTHR12565:SF177 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED D12 + View
Glycine max Glyma.01G187600 PTHR12565//PTHR12565:SF177 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Gm01 - View
Glycine max Glyma.14G084200 PTHR12565//PTHR12565:SF87 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR ALC-RELATED Gm14 - View
Glycine max Glyma.17G241000 PTHR12565//PTHR12565:SF87//PTHR12565:SF92 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR ALC-RELATED // TRANSCRIPTION FACTOR SPATULA Gm17 + View
Glycine max Glyma.11G054600 PTHR12565//PTHR12565:SF177 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Gm11 + View
Glycine max Glyma.17G172400 PTHR12565//PTHR12565:SF87 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR ALC-RELATED Gm17 + View
Gossypium raimondii Gorai.008G077300 Chr08 - View
Gossypium raimondii Gorai.009G213800 Chr09 - View
Gossypium raimondii Gorai.007G214800 Chr07 - View
Helianthus annuus HanXRQChr09g0263681 Putative myc-type, basic helix-loop-helix (bHLH) domain HanXRQChr09 + View
Lupinus albus Lalb_Chr16g0378581 PTHR12565//PTHR12565:SF177 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr16 - View
Lupinus albus Lalb_Chr09g0323261 PTHR12565//PTHR12565:SF177 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr09 - View
Lotus japonicus Lj2g0007139 PTHR12565//PTHR12565:SF177 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED chr2 + View
Lonicera japonica Lj4C151G11 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_4_126860 PTHR12565:SF92 - TRANSCRIPTION FACTOR SPATULA Lsat_1_v8_lg_4 - View
Lactuca sativa Lsat_1_v5_gn_4_164941 PTHR12565:SF92 - TRANSCRIPTION FACTOR SPATULA Lsat_1_v8_lg_4 + View
Malus domestica MD15G1285600 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr15 - View
Malus domestica MD02G1174600 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr02 - View
Manihot esculenta Manes.12G104100 Chromosome12 - View
Manihot esculenta Manes.18G039601 Chromosome18 - View
Medicago truncatula Medtr5g017040 helix loop helix DNA-binding domain protein chr5 + View
Nelumbo nucifera Nn5g30344 chr5 - View
Nelumbo nucifera Nn1g04800 chr1 + View
Olea europaea Oeu014830.2 chr10 + View
Petunia axillaris Peaxi162Scf00450g00124 Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 1 Peaxi162Scf00450 + View
Punica granatum PGR004G2742 NC_045131.1 - View
Prunus persica Prupe.1G432800 PTHR12565:SF92 - TRANSCRIPTION FACTOR SPATULA Pp01 + View
Prunus persica Prupe.7G131400 Pp07 + View
Pisum sativum Psat2g166760 Helix-loop-helix DNA-binding domain chr2LG1 - View
Papaver somniferum PSO210G3967 NC_039359.1 - View
Populus trichocarpa Potri.014G025800 PTHR12565//PTHR12565:SF92 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR SPATULA Chr14 + View
Populus trichocarpa Potri.002G124400 PTHR12565//PTHR12565:SF92 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR SPATULA Chr02 + View
Populus trichocarpa Potri.005G139700 PTHR12565//PTHR12565:SF87//PTHR12565:SF92 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR ALC-RELATED // TRANSCRIPTION FACTOR SPATULA Chr05 + View
Phaseolus vulgaris Phvul.003G242900 PTHR12565//PTHR12565:SF177 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Chr03 + View
Phaseolus vulgaris Phvul.001G023200 PTHR12565:SF87 - TRANSCRIPTION FACTOR ALC-RELATED Chr01 - View
Phaseolus vulgaris Phvul.002G017600 PTHR12565//PTHR12565:SF177 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Chr02 + View
Quercus lobata QL02p004388 CM012294 + View
Quercus lobata QL06p040949 6 + View
Rosa chinensis RcHm_v2.0_Chr2g0105931 RcHm_v2.0_Chr2 - View
Rosa chinensis RcHm_v2.0_Chr6g0308251 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim06G0052600 chr06 - View
Rhododendron simsii Rhsim08G0099600 chr08 + View
Striga asiatica SGA_v2.0_scaffold15G07324 scaffold15 - View
Salvia bowleyana SalBow7G3162 GWHASIU00000005 - View
Salix brachista Sabra05G0111000 GWHAAZH00000005 + View
Salix brachista Sabra14G0017700 GWHAAZH00000014 + View
Simmondsia chinensis Sc03g0001690 GWHAASQ00000003 - View
Simmondsia chinensis Sc15g0005990 GWHAASQ00000015 + View
Sechium edule Sed0008725 LG14 - View
Solanum lycopersicum Solyc02g093280.2 bHLH transcription factor 017 SL4.0ch02 + View
Solanum lycopersicum Solyc04g078690.3 bHLH transcription factor 035 SL4.0ch04 + View
Schrenkiella parvula Sp2g29570 PTHR12565:SF87 - TRANSCRIPTION FACTOR ALC-RELATED ch2-4 + View
Solanum pennellii Sopen02g037840 Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy. | SPATULA (SPT) | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400004011 ALCATRAZ/SPATULA ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG401007955 ALCATRAZ/SPATULA ST4.03ch04 + View
Selenicereus undatus Hund13544 Scaffold_33679 + View
Trochodendron aralioides TAR625G0514 group4 - View
Trochodendron aralioides TAR381G0866 group11 - View
Theobroma cacao Thecc.01G058800 Basic helix-loop-helix DNA-binding superfamily protein Chromosome_1 - View
Theobroma cacao Thecc.08G003800 Basic helix-loop-helix DNA-binding superfamily protein Chromosome_8 + View
Tarenaya hassleriana THA.LOC104819849 transcription factor SPATULA-like NW_010966177.1 - View
Tarenaya hassleriana THA.LOC104807589 transcription factor SPATULA-like NW_010963495.1 - View
Trifolium pratense TPR.G3790 Tp57577_TGAC_v2_LG1 + View
Trifolium pratense TPR.G26882 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI53G1544 NC_052244.1 - View
Tripterygium wilfordii TWI09G1501 NC_052245.1 - View
Tripterygium wilfordii TWI56G0004 NC_052242.1 + View
Vaccinium macrocarpon vmacro17958 Similar to SPT: Transcription factor SPATULA (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G0727 CM024074.1 + View
Vigna mungo VMungo0251G3455 CM024069.1 + View
Vigna mungo VMungo0647G0286 CM024073.1 + View
Vitis vinifera GSVIVG01022111001 chr7 + View
Vitis vinifera GSVIVG01009467001 chr18 + View