Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr7.127 | chr7 | + | View | |
Actinidia chinensis | Actinidia38326 | Lachesis_group15 | + | View | |
Actinidia chinensis | Actinidia23552 | Lachesis_group25 | - | View | |
Avicennia marina | MSTRG.26279 | ScioBoG_52287_HRSCAF_52434 | - | View | |
Avicennia marina | MSTRG.6134 | ScioBoG_102839_HRSCAF_103093 | + | View | |
Avicennia marina | MSTRG.10692 | ScioBoG_13798_HRSCAF_13862 | + | View | |
Aquilegia oxysepala | Aqoxy7G03421 | CHR07 | - | View | |
Amborella trichopoda | ATR0739G001 | AmTr_v1.0_scaffold00065 | + | View | |
Capsicum annuum | CAN.G160.68 | PGAv.1.6.scaffold160 | - | View | |
Capsicum annuum | CAN.G551.41 | PGAv.1.6.scaffold551 | + | View | |
Cannabis sativa | CANSAT11G0509 | NC_044377.1 | - | View | |
Cicer arietinum L. | Ca_21124_v3 | Ca_LG7_v3 | + | View | |
Corylus avellana | Haze_19211 | Similar to EIF5A1: Eukaryotic translation initiation factor 5A-1/2 (Solanum tuberosum OX%3D4113) | 7 | - | View |
Coffea canephora | Cc06_g15050 | Eukaryotic translation initiation factor 5A-4 | chr6 | - | View |
Citrus clementina | Ciclev10009759m.g | scaffold_1 | - | View | |
Carya illinoinensis | CiPaw.16G113200 | K03263 - translation initiation factor 5A (EIF5A) | Chr16 | - | View |
Carya illinoinensis | CiPaw.15G177000 | K03263 - translation initiation factor 5A (EIF5A) | Chr15 | + | View |
Citrullus lanatus | ClCG06G012390 | Eukaryotic translation initiation factor 5A | CG_Chr06 | + | View |
Cucumis sativus L. | CsaV3_1G028950 | Eukaryotic translation initiation factor 5A | chr1 | + | View |
Cucumis sativus L. | CsaV3_4G036580 | Eukaryotic translation initiation factor 5A | chr4 | - | View |
Daucus carota | DCAR_014811 | hypothetical protein | DCARv2_Chr4 | + | View |
Davidia involucrata | Dinv42860 | GWHABJS00000085 | - | View | |
Davidia involucrata | Dinv43240 | GWHABJS00000085 | + | View | |
Durio zibethinus | Duzib168G1395 | NW_019168159.1 | - | View | |
Durio zibethinus | Duzib187G1984 | NW_019167860.1 | + | View | |
Erigeron canadensis | ECA240G2520 | Conyza_canadensis_scaffold:5 | + | View | |
Eucalyptus grandis | Eucgr.C00350 | Chr03 | - | View | |
Erythranthe guttata | Migut.J01338 | scaffold_10 | + | View | |
Fragaria x ananassa | FAN23G1937 | K03263 - translation initiation factor 5A (EIF5A) | Fvb1-3 | - | View |
Fragaria x ananassa | FAN28G0462 | K03263 - translation initiation factor 5A (EIF5A) | Fvb1-1 | + | View |
Fragaria x ananassa | FAN26G1669 | K03263 - translation initiation factor 5A (EIF5A) | Fvb1-2 | + | View |
Fragaria vesca | FvH4_1g00990 | K03263 - translation initiation factor 5A (EIF5A) | Fvb1 | - | View |
Glycine max | Glyma.02G203700 | K03263 - translation initiation factor 5A (EIF5A) | Gm02 | + | View |
Hydrangea macrophylla | Hma1.2p1_0222F.1_g093510 | Hma1.2p1_0222F.1 | + | View | |
Hydrangea macrophylla | Hma1.2p1_0028F.1_g017560 | Hma1.2p1_0028F.1 | + | View | |
Lotus japonicus | Lj4g0016260 | K03263 - translation initiation factor 5A (EIF5A) | chr4 | - | View |
Lonicera japonica | Lj7A458G51 | GWHAAZE00000007 | + | View | |
Lonicera japonica | Lj9C716T3 | GWHAAZE00000009 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_7_49720 | K02180//K03263 - cell cycle arrest protein BUB3 (BUB3) // translation initiation factor 5A (EIF5A) | Lsat_1_v8_lg_7 | + | View |
Magnolia biondii | MBI15_g19322_MAGBIO | AED:0.11 | Chr15 | + | View |
Magnolia biondii | MBI14_g09682_MAGBIO | AED:0.11 | Chr14 | + | View |
Malus domestica | MD02G1008000 | eukaryotic elongation factor 5A-1 | Chr02 | - | View |
Malus domestica | MD15G1152300 | eukaryotic elongation factor 5A-1 | Chr15 | - | View |
Manihot esculenta | Manes.06G036000 | Chromosome06 | - | View | |
Medicago truncatula | Medtr4g130907 | eukaryotic translation initiation factor 5A | chr4 | - | View |
Nelumbo nucifera | Nn8g39879 | chr8 | + | View | |
Nicotiana tabacum | Nitab4.5_0002315g0150 | Translation elongation factor, IF5A, hypusine site, Translation elongation factor IF5A, Translation protein SH3-like domain, Ribosomal protein L2 domain 2, Nucleic acid-binding, OB-fold, Translation elongation factor, IF5A C-terminal | Nitab4.5_0002315 | + | View |
Nicotiana tabacum | Nitab4.5_0002891g0020 | Translation elongation factor, IF5A, hypusine site, Translation elongation factor IF5A, Translation elongation factor, IF5A C-terminal, Nucleic acid-binding, OB-fold, Translation protein SH3-like domain, Ribosomal protein L2 domain 2 | Nitab4.5_0002891 | - | View |
Petunia axillaris | Peaxi162Scf00401g00830 | Eukaryotic translation initiation factor 5A-3 | Peaxi162Scf00401 | - | View |
Petunia axillaris | Peaxi162Scf00062g00224 | Eukaryotic translation initiation factor 5A-1/2 | Peaxi162Scf00062 | - | View |
Punica granatum | PGR142G1847 | NC_045128.1 | + | View | |
Prunus persica | Prupe.7G262400 | K03263 - translation initiation factor 5A (EIF5A) | Pp07 | + | View |
Populus trichocarpa | Potri.006G185000 | K03263 - translation initiation factor 5A (EIF5A) | Chr06 | - | View |
Populus trichocarpa | Potri.018G107300 | K03263 - translation initiation factor 5A (EIF5A) | Chr18 | - | View |
Phaseolus vulgaris | Phvul.003G156333 | K03263 - translation initiation factor 5A (EIF5A) | Chr03 | - | View |
Quercus lobata | QL02p093167 | CM012294 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr2g0085721 | RcHm_v2.0_Chr2 | - | View | |
Rhododendron simsii | Rhsim03G0257000 | chr03 | + | View | |
Striga asiatica | SGA_v2.0_scaffold45G17035 | scaffold45 | - | View | |
Salvia bowleyana | SalBow1G2486 | GWHASIU00000001 | + | View | |
Salix brachista | Sabra18G0091300 | GWHAAZH00000018 | - | View | |
Salix brachista | Sabra06G0140500 | GWHAAZH00000006 | - | View | |
Sechium edule | Sed0012692 | LG08 | - | View | |
Solanum lycopersicum | Solyc07g005560.3 | Eukaryotic translation initiation factor 5A (AHRD V3.3 *** A0A2G3BXD8_CAPCH) | SL4.0ch07 | + | View |
Solanum lycopersicum | Solyc12g010060.2 | Eukaryotic translation initiation factor 5A (AHRD V3.3 *** Q6S021_CAPAN) | SL4.0ch12 | - | View |
Solanum pennellii | Sopen12g004940 | Eukaryotic translation initiation factor 5A-1/2 (eIF-5A-1/2) (eIF-4D) - Solanum tuberosum (Potato), Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced. | eukaryotic elongation factor 5A-1 (ELF5A-1) | FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity | INVOLVED IN: translational initiation, xylem development | LOCATED IN: cellular_component unknown | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold , Translation elongation factor, IF5A, hypusine site , Translation protein SH3-like, subgroup , Translation elongation factor, IF5A , Translation elongation factor, IF5A C-terminal , Translation protein SH3-like , Nucleic acid-binding, OB-fold-like , KOW | BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 | Spenn-ch12 | - | View |
Solanum pennellii | Sopen07g001660 | Eukaryotic translation initiation factor 5A-3 (eIF-5A-3) (eIF-4D) - Solanum tuberosum (Potato), Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced. | eukaryotic elongation factor 5A-1 (ELF5A-1) | FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity | INVOLVED IN: translational initiation, xylem development | LOCATED IN: cellular_component unknown | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold , Translation elongation factor, IF5A, hypusine site , Translation protein SH3-like, subgroup , Translation elongation factor, IF5A , Translation elongation factor, IF5A C-terminal , Translation protein SH3-like , Nucleic acid-binding, OB-fold-like , KOW | BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 | Spenn-ch07 | + | View |
Solanum tuberosum | PGSC0003DMG400007830 | Eukaryotic translation initiation factor 5A-1/2 | ST4.03ch12 | + | View |
Solanum tuberosum | PGSC0003DMG400011137 | Eukaryotic translation initiation factor 5A-3 | ST4.03ch07 | + | View |
Theobroma cacao | Thecc.09G031300 | Eukaryotic translation initiation factor 5A-1 | Chromosome_9 | - | View |
Trifolium pratense | TPR.G24880 | Tp57577_TGAC_v2_scaf_171 | - | View | |
Tripterygium wilfordii | TWI34G1203 | NC_052235.1 | - | View | |
Tripterygium wilfordii | TWI63G1671 | NC_052240.1 | + | View | |
Vaccinium macrocarpon | vmacro06084 | Similar to Eukaryotic translation initiation factor 5A-4 (Solanum lycopersicum OX%3D4081) | chr2_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vigna mungo | VMungo1215G2751 | CM024074.1 | + | View |