Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0040954 PREDICTED: uncharacterized protein LOC102587448 isoform X1 [Solanum tuberosum] Contig229 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G17890 LG-1 + View
Arabidopsis lyrata AL8G41280 scaffold_8 - View
Arabidopsis thaliana AT5G64020 TRICHOME BIREFRINGENCE-LIKE 14 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication). TRICHOME BIREFRINGENCE-LIKE 14 (TBL14)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 15 (TAIR:AT2G37720.1)%3B Has 1334 Blast hits to 1314 proteins in 27 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1334%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC01g02656 ChrC01 - View
Brassica napus A06p30650 A06 - View
Brassica rapa BraA06t26015Z A06 - View
Brassica rapa BraA02t09231Z A02 - View
Cannabis sativa CANSAT01G2147 NC_044373.1 + View
Cicer arietinum L. Ca_17628_v3 Ca_LG6_v3 + View
Cicer arietinum L. Ca_16957_v3 Ca_LG5_v3 - View
Corylus avellana Haze_25280 Similar to TBL14: Protein trichome birefringence-like 14 (Arabidopsis thaliana OX%3D3702) 8 + View
Carica papaya Cpa.g.sc42.175 supercontig_42 - View
Capsella rubella Carub.0008s2480 PTHR13533:SF5 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 14-RELATED scaffold_8 - View
Daucus carota DCAR_001201 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv24395 GWHABJS00000012 - View
Durio zibethinus Duzib264G0569 NW_019167960.1 - View
Eutrema salsugineum Thhalv10004337m.g PTHR13533:SF5 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 14-RELATED scaffold_6 + View
Fragaria x ananassa FAN19G1724 PF13839 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) Fvb1-4 - View
Fragaria vesca FvH4_1g24540 PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Fvb1 - View
Gossypium hirsutum Gohir.A05G383000 PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) A05 + View
Glycine max Glyma.08G001100 PTHR13533:SF5 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 14-RELATED Gm08 - View
Lupinus albus Lalb_Chr12g0203111 PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Lalb_Chr12 + View
Lupinus albus Lalb_Chr13g0296561 PTHR32285//PTHR32285:SF34 - FAMILY NOT NAMED // PROTEIN TRICHOME BEREFRINGENCE-LIKE 7 Lalb_Chr13 + View
Lotus japonicus Lj4g0027013 PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) chr4 + View
Malus domestica MD15G1134400 TRICHOME BIREFRINGENCE-LIKE 14 Chr15 - View
Prunus persica Prupe.3G123000 PF14416 - PMR5 N terminal Domain (PMR5N) Pp03 - View
Populus trichocarpa Potri.007G104300 PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Chr07 + View
Populus trichocarpa Potri.005G064875 PF13839 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) Chr05 - View
Quercus lobata QL10p042542 10 + View
Salix brachista Sabra07G0085300 GWHAAZH00000007 + View
Schrenkiella parvula Sp2g27090 PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) ch2-4 - View
Trochodendron aralioides TAR376G0221 group14 - View
Tarenaya hassleriana THA.LOC104800105 protein trichome birefringence-like 14 NW_010960188.1 + View
Tripterygium wilfordii TWI79G1187 NC_052238.1 + View
Vaccinium macrocarpon vmacro12786 Similar to TBL16: Protein trichome birefringence-like 16 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View