Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG4G9560 | LG-4 | + | View | |
Acer truncatum | Atru.chr13.975 | chr13 | + | View | |
Actinidia chinensis | Actinidia19253 | Lachesis_group28 | + | View | |
Actinidia chinensis | Actinidia29657 | Lachesis_group7 | + | View | |
Actinidia chinensis | Actinidia10269 | Lachesis_group26 | + | View | |
Amaranthus hybridus | Ah.05g171530 | AmaHy_arrow1_Scaffold_5 | - | View | |
Aquilegia oxysepala | Aqoxy5G01343 | CHR05 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.I0605Y | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | arahy.Tifrunner.gnm1.Arahy.17 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.3KGV08 | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | arahy.Tifrunner.gnm1.Arahy.17 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.PS3G0C | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | arahy.Tifrunner.gnm1.Arahy.08 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.CI62AJ | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | arahy.Tifrunner.gnm1.Arahy.07 | - | View |
Amborella trichopoda | ATR0767G187 | AmTr_v1.0_scaffold00033 | + | View | |
Beta vulgaris | EL10Ac1g00487 | PTHR11254//PTHR11254:SF334 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED | Chr1_EL10_PGA_scaffold3 | + | View |
Cicer arietinum L. | Ca_05473_v3 | Ca_LG2_v3 | - | View | |
Corylus avellana | Haze_22488 | Similar to UPL2: E3 ubiquitin-protein ligase UPL2 (Arabidopsis thaliana OX%3D3702) | 3 | - | View |
Coffea canephora | Cc10_g08380 | E3 ubiquitin protein ligase upl2, putative | chr10 | + | View |
Citrus clementina | Ciclev10000001m.g | scaffold_5 | + | View | |
Ceratophyllum demersum | CDE04G1670 | 2 | - | View | |
Ceratophyllum demersum | CDE07G0942 | 5 | + | View | |
Carpinus fangiana | Cfa013814 | Cfa05 | - | View | |
Carya illinoinensis | CiPaw.08G057100 | KOG0939 - E3 ubiquitin-protein ligase/Putative upstream regulatory element binding protein | Chr08 | - | View |
Carya illinoinensis | CiPaw.07G163100 | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | Chr07 | + | View |
Citrullus lanatus | ClCG08G011550 | ubiquitin-protein ligase 2 LENGTH=3658 | CG_Chr08 | + | View |
Cucumis melo | MELO3C011072.2 | E3 ubiquitin-protein ligase UPL1-like | chr03 | - | View |
Carica papaya | Cpa.g.sc21.42 | supercontig_21 | - | View | |
Chenopodium quinoa | AUR62014369 | UPL1: E3 ubiquitin-protein ligase UPL1 | C_Quinoa_Scaffold_1566 | - | View |
Chenopodium quinoa | AUR62019112 | UPL1: E3 ubiquitin-protein ligase UPL1 | C_Quinoa_Scaffold_3876 | - | View |
Cucumis sativus L. | CsaV3_2G030130 | E3 ubiquitin-protein ligase UPL1-like | chr2 | + | View |
Daucus carota | DCAR_020028 | hypothetical protein | DCARv2_Chr6 | - | View |
Daucus carota | DCAR_009555 | hypothetical protein | DCARv2_Chr3 | + | View |
Davidia involucrata | Dinv44876 | GWHABJS00000002 | - | View | |
Durio zibethinus | Duzib116G0124 | NW_019167949.1 | + | View | |
Durio zibethinus | Duzib041G0164 | NW_019167826.1 | + | View | |
Durio zibethinus | Duzib093G1788 | NW_019167937.1 | - | View | |
Erigeron canadensis | ECA247G4116 | Conyza_canadensis_scaffold:7 | + | View | |
Eucalyptus grandis | Eucgr.F02160 | Chr06 | + | View | |
Fragaria x ananassa | FAN04G1446 | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | Fvb5-4 | + | View |
Fragaria x ananassa | FAN08G1002 | PTHR11254//PTHR11254:SF334 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED | Fvb5-3 | - | View |
Fragaria x ananassa | FAN18G0248 | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | Fvb5-1 | + | View |
Fragaria vesca | FvH4_5g34290 | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | Fvb5 | + | View |
Gossypium hirsutum | Gohir.D06G030100 | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | D06 | + | View |
Gossypium hirsutum | Gohir.A05G264300 | PTHR11254//PTHR11254:SF334 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED | A05 | + | View |
Gossypium hirsutum | Gohir.A06G030900 | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | A06 | + | View |
Gossypium hirsutum | Gohir.D05G266800 | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | D05 | + | View |
Gossypium hirsutum | Gohir.A05G218400 | PTHR11254//PTHR11254:SF334 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED | A05 | + | View |
Gossypium hirsutum | Gohir.D05G221100 | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | D05 | + | View |
Glycine max | Glyma.14G183000 | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | Gm14 | - | View |
Glycine max | Glyma.04G096900 | KOG0939 - E3 ubiquitin-protein ligase/Putative upstream regulatory element binding protein | Gm04 | - | View |
Glycine max | Glyma.06G098700 | KOG0939 - E3 ubiquitin-protein ligase/Putative upstream regulatory element binding protein | Gm06 | - | View |
Glycine max | Glyma.02G216000 | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | Gm02 | - | View |
Gossypium raimondii | Gorai.010G033100 | Chr10 | + | View | |
Gossypium raimondii | Gorai.009G278900 | Chr09 | + | View | |
Gossypium raimondii | Gorai.009G228200 | Chr09 | + | View | |
Hydrangea macrophylla | Hma1.2p1_0125F.1_g058695 | Hma1.2p1_0125F.1 | + | View | |
Hydrangea macrophylla | Hma1.2p1_0010F.1_g006490 | Hma1.2p1_0010F.1 | + | View | |
Lupinus albus | Lalb_Chr11g0064861 | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | Lalb_Chr11 | + | View |
Lupinus albus | Lalb_Chr17g0344621 | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | Lalb_Chr17 | - | View |
Lupinus albus | Lalb_Chr04g0252751 | PF06012//PF06025 - Domain of Unknown Function (DUF908) (DUF908) // Domain of Unknown Function (DUF913) (DUF913) | Lalb_Chr04 | + | View |
Lupinus albus | Lalb_Chr23g0269951 | KOG0940 - Ubiquitin protein ligase RSP5/NEDD4 | Lalb_Chr23 | + | View |
Lupinus albus | Lalb_Chr08g0242601 | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | Lalb_Chr08 | - | View |
Lotus japonicus | LjContig00408g0027979 | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | Contig00408 | + | View |
Lonicera japonica | Lj4C86T7 | GWHAAZE00000004 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_6_107380 | PF06012 - Domain of Unknown Function (DUF908) (DUF908) | Lsat_1_v8_lg_6 | - | View |
Lactuca sativa | Lsat_1_v5_gn_1_2001 | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | Lsat_1_v8_lg_1 | + | View |
Magnolia biondii | MBI16_g07279_MAGBIO | AED:0.08 | Chr16 | + | View |
Magnolia biondii | MBI16_g27902_MAGBIO | AED:0.04 | Chr16 | + | View |
Malus domestica | MD08G1203000 | ubiquitin-protein ligase 2 | Chr08 | - | View |
Malus domestica | MD15G1388600 | ubiquitin-protein ligase 2 | Chr15 | + | View |
Manihot esculenta | Manes.18G057015 | Chromosome18 | + | View | |
Manihot esculenta | Manes.05G189200 | Chromosome05 | + | View | |
Medicago truncatula | Medtr3g099777 | E3 ubiquitin-protein ligase UPL1-like protein | chr3 | + | View |
Medicago truncatula | Medtr5g066710 | E3 ubiquitin-protein ligase UPL1-like protein | chr5 | - | View |
Nelumbo nucifera | Nn5g29819 | chr5 | + | View | |
Nelumbo nucifera | Nn1g05645 | chr1 | - | View | |
Punica granatum | PGR031G3206 | NC_045127.1 | + | View | |
Prunus persica | Prupe.1G535000 | PTHR11254//PTHR11254:SF334 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED | Pp01 | + | View |
Pisum sativum | Psat2g064840 | HECT-domain (ubiquitin-transferase) | chr2LG1 | - | View |
Papaver somniferum | PSO210G0754 | NC_039359.1 | + | View | |
Papaver somniferum | PSO170G1658 | NC_039360.1 | + | View | |
Populus trichocarpa | Potri.002G110500 | PTHR11254//PTHR11254:SF334 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED | Chr02 | + | View |
Phaseolus vulgaris | Phvul.009G034900 | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | Chr09 | + | View |
Phaseolus vulgaris | Phvul.008G183200 | K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) | Chr08 | - | View |
Quercus lobata | QL09p018620 | 9 | - | View | |
Rhododendron simsii | Rhsim07G0213300 | chr07 | - | View | |
Salvia bowleyana | SalBow7G0174 | GWHASIU00000005 | + | View | |
Salix brachista | Sabra02G0087000 | GWHAAZH00000002 | + | View | |
Solanum lycopersicum | Solyc04g076620.4 | E3 ubiquitin-protein ligase UPL2 (AHRD V3.3 *** A0A2G2X032_CAPBA) | SL4.0ch04 | - | View |
Solanum pennellii | Sopen04g030340 | encodes a ubiquitin-protein ligase-like protein containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | ubiquitin-protein ligase 2 (UPL2) | FUNCTIONS IN: ubiquitin-protein ligase activity | INVOLVED IN: protein ubiquitination, ubiquitin-dependent protein catabolic process | LOCATED IN: cytosol, mitochondrion, ubiquitin ligase complex, nucleus | EXPRESSED IN: male gametophyte, cultured cell, pollen tube | EXPRESSED DURING: M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal , Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote , E3 ubiquitin ligase, domain of unknown function DUF913 , HECT , Armadillo-type fold , Ubiquitin interacting motif , E3 ubiquitin ligase, domain of unknown function DUF908 , UBA-like | BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 1 | Spenn-ch04 | - | View |
Selenicereus undatus | Hund26826 | Scaffold_2055 | - | View | |
Trochodendron aralioides | TAR625G1466 | group4 | + | View | |
Trochodendron aralioides | TAR381G0008 | group11 | + | View | |
Theobroma cacao | Thecc.08G073800 | E3 ubiquitin-protein ligase UPL2 | Chromosome_8 | - | View |
Tarenaya hassleriana | THA.LOC104799856 | E3 ubiquitin-protein ligase UPL2-like | NW_010968608.1 | + | View |
Tripterygium wilfordii | TWI12G0371 | The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon | NC_052243.1 | - | View |
Tripterygium wilfordii | TWI56G1479 | NC_052242.1 | + | View | |
Vaccinium macrocarpon | vmacro04636 | Similar to UPL2: E3 ubiquitin-protein ligase UPL2 (Arabidopsis thaliana OX%3D3702) | chr12_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vitis vinifera | GSVIVG01009206001 | chr18 | - | View |