Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia05274 Lachesis_group20 - View
Arabidopsis lyrata AL5G34250 scaffold_5 - View
Arabidopsis lyrata AL4G33410 scaffold_4 + View
Avicennia marina MSTRG.19135 ScioBoG_25048_HRSCAF_25167 + View
Arabidopsis thaliana AT3G53340 nuclear factor Y, subunit B10 nuclear factor Y%2C subunit B10 (NF-YB10)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: intracellular%2C nucleus%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C CBFA/NFYB%2C DNA topoisomerase (InterPro:IPR003957)%2C Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958)%2C Histone-fold (InterPro:IPR009072)%2C Transcription factor%2C NFYB/HAP3%2C conserved site (InterPro:IPR003956)%3B BEST Arabidopsis thaliana protein match is: nuclear factor Y%2C subunit B8 (TAIR:AT2G37060.3)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT2G37060 nuclear factor Y, subunit B8 nuclear factor Y%2C subunit B8 (NF-YB8)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%2C intracellular%3B EXPRESSED IN: male gametophyte%2C pollen tube%3B EXPRESSED DURING: M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C CBFA/NFYB%2C DNA topoisomerase (InterPro:IPR003957)%2C Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958)%2C Histone-fold (InterPro:IPR009072)%2C Transcription factor%2C NFYB/HAP3%2C conserved site (InterPro:IPR003956)%3B BEST Arabidopsis thaliana protein match is: nuclear factor Y%2C subunit B10 (TAIR:AT3G53340.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB01g00289 ChrB01 + View
Brassica carinata BcaC07g39698 ChrC07 - View
Brassica napus A03p20420 A03 + View
Brassica napus C08p28540 C08 - View
Brassica napus A09p46350 A09 - View
Brassica oleracea BolC8t50463H C8 - View
Brassica rapa BraA09t40100Z A09 - View
Beta vulgaris EL10Ac7g17343 PTHR11064//PTHR11064:SF27 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED Chr7_EL10_PGA_scaffold5 + View
Cicer arietinum L. Ca_08823_v3 Ca_LG3_v3 + View
Coffea canephora Cc06_g03510 Nuclear transcription factor Y subunit B-8 chr6 + View
Citrus clementina Ciclev10012920m.g scaffold_6 - View
Carpinus fangiana Cfa017502 Cfa07 + View
Cardamine hirsuta CARHR131560 Nuclear transcription factor Y subunit B-3 Chr4 + View
Carya illinoinensis CiPaw.02G177000 PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED Chr02 - View
Carya illinoinensis CiPaw.01G276900 PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED Chr01 - View
Carya illinoinensis CiPaw.09G180400 PTHR11064//PTHR11064:SF27 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED Chr09 - View
Citrullus lanatus ClCG10G020590 Nuclear transcription factor Y subunit B-8-like CG_Chr10 - View
Cucumis melo MELO3C009309.2 Nuclear transcription factor Y subunit B chr04 - View
Cucumis melo MELO3C011726.2 Nuclear transcription factor Y subunit B chr10 - View
Capsella rubella Carub.0005s1989 scaffold_5 - View
Capsella rubella Carub.0004s1894 PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED scaffold_4 + View
Cucumis sativus L. CsaV3_3G035490 Nuclear transcription factor Y subunit B chr3 + View
Daucus carota DCAR_017726 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv11814 GWHABJS00000009 + View
Davidia involucrata Dinv37247 GWHABJS00000021 - View
Davidia involucrata Dinv35707 GWHABJS00000015 + View
Durio zibethinus Duzib093G1975 NW_019167937.1 - View
Durio zibethinus Duzib106G0427 NW_019168492.1 - View
Durio zibethinus Duzib106G0738 NW_019168492.1 + View
Durio zibethinus Duzib128G1955 NW_019168481.1 + View
Durio zibethinus Duzib187G0680 NW_019167860.1 - View
Durio zibethinus Duzib114G0115 NW_019167926.1 + View
Erigeron canadensis ECA238G0091 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA248G0102 Conyza_canadensis_scaffold:9 + View
Erigeron canadensis ECA233G0375 Conyza_canadensis_scaffold:1 - View
Erythranthe guttata Migut.J00411 scaffold_10 + View
Eutrema salsugineum Thhalv10010755m.g PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED scaffold_16 + View
Eutrema salsugineum Thhalv10017301m.g PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED scaffold_10 + View
Fragaria x ananassa FAN09G4851 PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED Fvb6-2 - View
Fragaria x ananassa FAN02G2101 PTHR11064//PTHR11064:SF27 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED Fvb6-4 + View
Fragaria x ananassa FAN05G0953 PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED Fvb6-3 - View
Fragaria vesca FvH4_6g15260 PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED Fvb6 + View
Gossypium hirsutum Gohir.A11G325200 PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED A11 - View
Gossypium hirsutum Gohir.D10G216000 PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED D10 - View
Gossypium hirsutum Gohir.A10G207900 PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED A10 - View
Gossypium hirsutum Gohir.A01G217500 PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED A01 - View
Gossypium hirsutum Gohir.D01G206200 PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED D01 - View
Glycine max Glyma.19G178500 PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED Gm19 + View
Glycine max Glyma.03G177700 PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Gm03 + View
Glycine max Glyma.10G048900 PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED Gm10 + View
Gossypium raimondii Gorai.002G250600 Chr02 - View
Gossypium raimondii Gorai.011G241600 Chr11 - View
Hydrangea macrophylla Hma1.2p1_0111F.1_g053820 Hma1.2p1_0111F.1 + View
Lupinus albus Lalb_Chr02g0153621 PTHR11064//PTHR11064:SF27 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED Lalb_Chr02 + View
Lupinus albus Lalb_Chr06g0171371 PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Lalb_Chr06 + View
Lupinus albus Lalb_Chr20g0112941 PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Lalb_Chr20 + View
Lotus japonicus Lj5g0015809 PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED chr5 - View
Lotus japonicus Lj1g0001999 PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED chr1 - View
Lonicera japonica Lj8A95T22 GWHAAZE00000008 + View
Lonicera japonica Lj2C106G8 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_6_29620 Lsat_1_v8_lg_6 - View
Lactuca sativa Lsat_1_v5_gn_2_109681 Lsat_1_v8_lg_2 - View
Lactuca sativa Lsat_1_v5_gn_1_53800 PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED Lsat_1_v8_lg_1 - View
Malus domestica MD12G1124800 nuclear factor Y Chr12 - View
Malus domestica MD04G1104700 nuclear factor Y Chr04 - View
Manihot esculenta Manes.08G002900 Chromosome08 + View
Manihot esculenta Manes.09G080719 Chromosome09 - View
Manihot esculenta Manes.10G041500 Chromosome10 + View
Medicago truncatula Medtr7g100650 nuclear transcription factor Y subunit B chr7 + View
Nelumbo nucifera Nn2g10646 chr2 + View
Olea europaea Oeu035144.1 chr11 - View
Oryza sativa ssp. japonica Os05g0463800 Similar to Nuclear transcription factor Y subunit B-3. CCAAT-box binding transcription factor, Chloroplast biogenesis chr05 - View
Petunia axillaris Peaxi162Scf00005g00493 nuclear factor Y, subunit B8 Peaxi162Scf00005 - View
Punica granatum PGR004G1233 NC_045131.1 - View
Prunus persica Prupe.6G241800 Pp06 - View
Populus trichocarpa Potri.016G085000 PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Chr16 + View
Phaseolus vulgaris Phvul.007G163100 PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED Chr07 + View
Phaseolus vulgaris Phvul.001G174600 PTHR11064//PTHR11064:SF45 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Chr01 + View
Quercus lobata QL07p045328 7 - View
Rosa chinensis RcHm_v2.0_Chr3g0468661 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim04G0151700 chr04 - View
Striga asiatica SGA_v2.0_scaffold126G33892 scaffold126 + View
Striga asiatica SGA_v2.0_scaffold94G28665 scaffold94 + View
Salix brachista Sabra16G0092000 GWHAAZH00000016 + View
Simmondsia chinensis Sc02g0002040 GWHAASQ00000002 - View
Simmondsia chinensis Sc20g0004180 GWHAASQ00000020 + View
Sechium edule Sed0019558 LG04 - View
Sechium edule Sed0002398 LG02 + View
Solanum lycopersicum Solyc09g007290.4 Nuclear transcription factor Y subunit B-8 (AHRD V3.3 *** A0A2G3BJK6_CAPCH) SL4.0ch09 + View
Schrenkiella parvula Sp4g19380 PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED ch4-6 + View
Schrenkiella parvula Sp5g09000 PTHR11064//PTHR11064:SF27 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED ch5-1 + View
Solanum tuberosum PGSC0003DMG400001733 Ccaat-binding transcription factor subunit A ST4.03ch09 - View
Trochodendron aralioides TAR623G1048 group7 - View
Trochodendron aralioides TAR633G2714 group2 + View
Theobroma cacao Thecc.05G053400 Nuclear transcription factor Y subunit B-10 Chromosome_5 + View
Trifolium pratense TPR.G36853 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI74G1200 NC_052234.1 + View
Tripterygium wilfordii TWI53G1938 NC_052244.1 - View
Vaccinium macrocarpon vmacro08695 Similar to NFYB8: Nuclear transcription factor Y subunit B-8 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G3531 CM024070.1 + View
Vigna mungo VMungo0720G0543 CM024071.1 - View
Zea mays Zm00001eb368240 Zm00001e028797 8 + View