Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0005250 hypothetical protein VITISV_017962 [Vitis vinifera] Chr12 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr7.2328 chr7 - View
Actinidia chinensis Actinidia16020 Lachesis_group9 - View
Actinidia chinensis Actinidia13426 Lachesis_group12 + View
Actinidia chinensis Actinidia15707 Lachesis_group27 + View
Actinidia chinensis Actinidia13286 Lachesis_group18 + View
Arabidopsis lyrata AL7G19170 scaffold_7 - View
Avicennia marina MSTRG.13999 ScioBoG_18778_HRSCAF_18863 + View
Avicennia marina MSTRG.25873 ScioBoG_4119_HRSCAF_4138 + View
Avicennia marina MSTRG.11744 ScioBoG_17730_HRSCAF_17811 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TQX8J8 PTHR14155//PTHR14155:SF143 - RING FINGER DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LWVE23 PTHR14155//PTHR14155:SF116 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.09 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MM9B4U PTHR14155//PTHR14155:SF116 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.19 + View
Arabidopsis thaliana AT4G32600 C3H4 type zinc finger protein zinc finger (C3HC4-type RING finger) family protein%3B FUNCTIONS IN: protein binding%2C zinc ion binding%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C RING/FYVE/PHD-type (InterPro:IPR013083)%3B BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT1G80400.1)%3B Has 7180 Blast hits to 7160 proteins in 223 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 2398%3B Fungi - 545%3B Plants - 2870%3B Viruses - 33%3B Other Eukaryotes - 1328 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaC09g52050 ChrC09 + View
Brassica napus C01p06360 C01 - View
Brassica napus A01p05790 A01 - View
Brassica oleracea BolC1t00632H C1 - View
Brassica rapa BraA01t00548Z A01 - View
Beta vulgaris EL10Ac2g02542 PTHR14155//PTHR14155:SF143 - RING FINGER DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN Chr2_EL10_PGA_scaffold6 - View
Beta vulgaris EL10Ac8g18549 PTHR14155//PTHR14155:SF116 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr8_EL10_PGA_scaffold4 - View
Cannabis sativa CANSAT25G3023 NC_044370.1 - View
Cannabis sativa CANSAT56G0963 NC_044371.1 - View
Cicer arietinum L. Ca_15700_v3 Ca_LG5_v3 - View
Cicer arietinum L. Ca_12909_v3 Ca_LG4_v3 - View
Corylus avellana Haze_21620 Similar to At4g11680: E3 ubiquitin-protein ligase At4g11680 (Arabidopsis thaliana OX%3D3702) 3 + View
Coffea canephora Cc08_g08340 RING/U-box superfamily protein chr8 - View
Citrus clementina Ciclev10025899m.g scaffold_7 - View
Citrus clementina Ciclev10008289m.g scaffold_1 + View
Ceratophyllum demersum CDE07G0909 5 + View
Carpinus fangiana Cfa013206 Cfa05 + View
Carpinus fangiana Cfa002047 Cfa01 + View
Cardamine hirsuta CARHR240570 Ring finger protein, putative Chr7 + View
Carya illinoinensis CiPaw.08G015400 PTHR14155//PTHR14155:SF143 - RING FINGER DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN Chr08 + View
Carya illinoinensis CiPaw.02G152500 PTHR14155//PTHR14155:SF116 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr02 - View
Carya illinoinensis CiPaw.01G240800 PTHR14155//PTHR14155:SF116 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr01 - View
Citrullus lanatus ClCG08G012900 RING/U-box superfamily protein LENGTH=453 CG_Chr08 - View
Cucumis melo MELO3C011213.2 E3 ubiquitin-protein ligase At1g63170 chr03 + View
Chenopodium quinoa AUR62016427 At4g11680: E3 ubiquitin-protein ligase At4g11680 C_Quinoa_Scaffold_3514 + View
Chenopodium quinoa AUR62011035 At4g11680: E3 ubiquitin-protein ligase At4g11680 C_Quinoa_Scaffold_3799 - View
Chenopodium quinoa AUR62033408 At4g11680: E3 ubiquitin-protein ligase At4g11680 C_Quinoa_Scaffold_1765 - View
Chenopodium quinoa AUR62032377 At4g11680: E3 ubiquitin-protein ligase At4g11680 C_Quinoa_Scaffold_4087 + View
Chenopodium quinoa AUR62024842 At4g11680: E3 ubiquitin-protein ligase At4g11680 C_Quinoa_Scaffold_1516 - View
Capsella rubella Carub.0007s0795 PTHR14155//PTHR14155:SF143 - RING FINGER DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN scaffold_7 - View
Cucumis sativus L. CsaV3_2G031610 E3 ubiquitin-protein ligase chr2 - View
Davidia involucrata Dinv30212 GWHABJS00000003 - View
Davidia involucrata Dinv41567 GWHABJS00000013 + View
Davidia involucrata Dinv30532 GWHABJS00000019 + View
Davidia involucrata Dinv35885 GWHABJS00000017 - View
Davidia involucrata Dinv38062 GWHABJS00000006 + View
Durio zibethinus Duzib168G0278 NW_019168159.1 + View
Durio zibethinus Duzib150G1570 NW_019167882.1 - View
Durio zibethinus Duzib235G1543 NW_019167982.1 + View
Durio zibethinus Duzib168G1422 NW_019168159.1 + View
Durio zibethinus Duzib187G0482 NW_019167860.1 + View
Erigeron canadensis ECA233G0137 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.C01814 Chr03 - View
Eucalyptus grandis Eucgr.F03004 Chr06 + View
Erythranthe guttata Migut.E01499 scaffold_5 + View
Erythranthe guttata Migut.A00277 scaffold_1 - View
Eutrema salsugineum Thhalv10025242m.g PTHR14155:SF143 - C3H4 TYPE ZINC FINGER PROTEIN scaffold_1 - View
Fragaria x ananassa FAN05G5702 PTHR14155//PTHR14155:SF143 - RING FINGER DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN Fvb6-3 - View
Fragaria x ananassa FAN20G2117 PTHR14155//PTHR14155:SF143 - RING FINGER DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN Fvb2-3 - View
Fragaria x ananassa FAN24G2838 PTHR14155:SF143 - C3H4 TYPE ZINC FINGER PROTEIN Fvb2-2 - View
Fragaria x ananassa FAN27G0119 PTHR14155:SF143 - C3H4 TYPE ZINC FINGER PROTEIN Fvb2-1 + View
Fragaria x ananassa FAN15G2583 PTHR14155:SF143 - C3H4 TYPE ZINC FINGER PROTEIN Fvb2-4 + View
Fragaria vesca FvH4_2g30130 PTHR14155//PTHR14155:SF143 - RING FINGER DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN Fvb2 + View
Gossypium hirsutum Gohir.A10G078800 PTHR14155//PTHR14155:SF116 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED A10 + View
Gossypium hirsutum Gohir.D10G072700 PTHR14155//PTHR14155:SF116 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED D10 - View
Glycine max Glyma.14G129100 PTHR14155//PTHR14155:SF143 - RING FINGER DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN Gm14 + View
Glycine max Glyma.17G203800 PTHR14155//PTHR14155:SF143 - RING FINGER DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN Gm17 + View
Glycine max Glyma.15G012900 PTHR14155//PTHR14155:SF116 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm15 + View
Glycine max Glyma.13G361000 PTHR14155//PTHR14155:SF116 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm13 - View
Glycine max Glyma.06G073100 PTHR14155//PTHR14155:SF143 - RING FINGER DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN Gm06 + View
Glycine max Glyma.04G071800 PTHR14155//PTHR14155:SF143 - RING FINGER DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN Gm04 + View
Gossypium raimondii Gorai.011G078300 Chr11 - View
Hydrangea macrophylla Hma1.2p1_0018F.1_g013120 Hma1.2p1_0018F.1 + View
Lupinus albus Lalb_Chr11g0063971 PTHR14155//PTHR14155:SF143 - RING FINGER DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN Lalb_Chr11 + View
Lupinus albus Lalb_Chr14g0362011 PTHR14155:SF143 - C3H4 TYPE ZINC FINGER PROTEIN Lalb_Chr14 + View
Lupinus albus Lalb_Chr24g0402331 PTHR14155:SF143 - C3H4 TYPE ZINC FINGER PROTEIN Lalb_Chr24 + View
Lotus japonicus Lj1g0026242 PTHR14155//PTHR14155:SF143 - RING FINGER DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN chr1 - View
Lotus japonicus Lj5g0025665 PTHR14155//PTHR14155:SF143 - RING FINGER DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN chr5 - View
Lonicera japonica Lj7A713T55 GWHAAZE00000007 - View
Lonicera japonica Lj7A640T26 GWHAAZE00000007 + View
Lactuca sativa Lsat_1_v5_gn_6_10820 Lsat_1_v8_lg_6 + View
Malus domestica MD15G1115700 RING/U-box superfamily protein Chr15 - View
Malus domestica MD09G1215300 RING/U-box superfamily protein Chr09 - View
Malus domestica MD17G1198000 RING/U-box superfamily protein Chr17 - View
Manihot esculenta Manes.04G121100 Chromosome04 + View
Manihot esculenta Manes.16G068000 Chromosome16 + View
Medicago truncatula Medtr1g011340 transmembrane protein, putative chr1 - View
Medicago truncatula Medtr3g107995 zinc finger, C3HC4 type (RING finger) protein, putative chr3 + View
Nelumbo nucifera Nn2g11839 chr2 - View
Nicotiana tabacum Nitab4.5_0000125g0320 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0000125 - View
Olea europaea Oeu045177.1 chr8 + View
Olea europaea Oeu031562.1 scaffold262 + View
Oryza sativa ssp. japonica Os01g0178700 Similar to Protein binding protein. chr01 + View
Petunia axillaris Peaxi162Scf00105g01433 RING/U-box superfamily protein Peaxi162Scf00105 - View
Punica granatum PGR031G0724 NC_045127.1 - View
Prunus persica Prupe.1G467000 Pp01 - View
Prunus persica Prupe.3G074400 Pp03 - View
Pisum sativum Psat6g030960 Ring finger domain chr6LG2 + View
Pisum sativum Psat5g027600 Ring finger domain chr5LG3 + View
Populus trichocarpa Potri.018G034400 PTHR14155//PTHR14155:SF143 - RING FINGER DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN Chr18 + View
Populus trichocarpa Potri.006G247000 PTHR14155//PTHR14155:SF143 - RING FINGER DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN Chr06 - View
Phaseolus vulgaris Phvul.001G055600 PTHR14155:SF143 - C3H4 TYPE ZINC FINGER PROTEIN Chr01 + View
Quercus lobata QL12p031324 12 - View
Rosa chinensis RcHm_v2.0_Chr6g0312801 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim12G0196200 chr12 + View
Rhododendron simsii Rhsim02G0187600 chr02 - View
Rhododendron simsii Rhsim03G0245500 chr03 - View
Striga asiatica SGA_v2.0_scaffold169G38631 scaffold169 + View
Salix brachista Sabra06G0193200 GWHAAZH00000006 - View
Salix brachista Sabra18G0035000 GWHAAZH00000018 + View
Simmondsia chinensis Sc08g0007110 GWHAASQ00000008 + View
Simmondsia chinensis Sc09g0008830 GWHAASQ00000009 + View
Sechium edule Sed0000396 LG03 - View
Sechium edule Sed0013992 LG01 - View
Solanum lycopersicum Solyc08g067770.3 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1NXH1_ARTAN) SL4.0ch08 + View
Schrenkiella parvula Sp7g30370 PTHR14155//PTHR14155:SF143 - RING FINGER DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN ch7-5 + View
Solanum pennellii Sopen08g021680 zinc finger (C3HC4-type RING finger) family protein | FUNCTIONS IN: protein binding, zinc ion binding | LOCATED IN: plasma membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, RING/FYVE/PHD-type | BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400033616 Ring finger protein ST4.03ch08 + View
Selenicereus undatus Hund09177 Scaffold_33676 + View
Trochodendron aralioides TAR624G0660 group9 - View
Trochodendron aralioides TAR383G0910 group10 + View
Theobroma cacao Thecc.06G082400 RING/U-box superfamily protein Chromosome_6 + View
Theobroma cacao Thecc.09G115900 RING/U-box superfamily protein Chromosome_9 - View
Theobroma cacao Thecc.09G144500 RING/U-box superfamily protein Chromosome_9 - View
Tarenaya hassleriana THA.LOC104803818 E3 ubiquitin-protein ligase At1g12760-like NW_010971389.1 - View
Trifolium pratense TPR.G37155 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI32G0655 NC_052254.1 - View
Tripterygium wilfordii TWI34G2005 NC_052235.1 + View
Tripterygium wilfordii TWI32G0395 NC_052254.1 + View
Tripterygium wilfordii TWI63G0707 NC_052240.1 + View
Utricularia gibba unitig_748.g8207 unitig_748 + View
Vaccinium macrocarpon vmacro11117 Similar to At4g11680: E3 ubiquitin-protein ligase At4g11680 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro05444 Similar to At1g12760: E3 ubiquitin-protein ligase At1g12760 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G1150 CM024079.1 + View
Vigna mungo VMungo0647G1737 CM024073.1 + View
Vitis vinifera GSVIVG01035722001 chr4 + View
Vitis vinifera GSVIVG01017155001 chr9 - View
Vitis vinifera GSVIVG01015445001 chr11 - View
Zea mays Zm00001eb122400 Zm00001e016704 RING/U-box superfamily protein 3 - View