Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG10G15780 | LG-10 | - | View | |
Acer truncatum | Atru.chr5.674 | chr5 | - | View | |
Arabidopsis lyrata | AL5G44350 | scaffold_5 | - | View | |
Arabidopsis thaliana | AT3G61790 | Protein with RING/U-box and TRAF-like domain Protein with RING/U-box and TRAF-like domains%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C zinc ion binding%3B INVOLVED IN: multicellular organismal development%2C ubiquitin-dependent protein catabolic process%2C protein ubiquitination%3B LOCATED IN: nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974)%2C Seven-in-absentia protein%2C TRAF-like domain (InterPro:IPR018121)%2C Zinc finger%2C SIAH-type (InterPro:IPR013010)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Seven In Absentia Homolog-type (InterPro:IPR013323)%2C Seven-in-absentia protein%2C sina (InterPro:IPR004162)%2C TRAF-type (InterPro:IPR013322)%3B BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT4G27880.1)%3B Has 1836 Blast hits to 1817 proteins in 706 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1264%3B Fungi - 11%3B Plants - 486%3B Viruses - 2%3B Other Eukaryotes - 73 (source: NCBI BLink). | Chr3 | - | View |
Brassica carinata | BcaC08g45162 | ChrC08 | - | View | |
Brassica napus | C06p27970 | C06 | - | View | |
Brassica napus | A07p25750 | A07 | - | View | |
Brassica oleracea | BolC6t37958H | C6 | - | View | |
Brassica rapa | BraA07t30215Z | A07 | - | View | |
Citrus clementina | Ciclev10021159m.g | scaffold_3 | + | View | |
Cardamine hirsuta | CARHR172120 | Ubiquitin ligase | Chr5 | - | View |
Capsella rubella | Carub.0005s2853 | PTHR10315//PTHR10315:SF34 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED | scaffold_5 | - | View |
Eutrema salsugineum | Thhalv10006100m.g | PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED | scaffold_19 | + | View |
Schrenkiella parvula | Sp5g01580 | PTHR10315:SF34 - E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED | ch5-1 | + | View |