Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0001158 PREDICTED: pentatricopeptide repeat-containing protein At1g09190 [Solanum lycopersicum] Chr3 - View
CSS0010775 hypothetical protein EUGRSUZ_G01514 [Eucalyptus grandis] Chr6 - View
CSS0041116 PREDICTED: pentatricopeptide repeat-containing protein At4g25270, chloroplastic [Vitis vinifera] Chr1 - View
CSS0018945 PREDICTED: pentatricopeptide repeat-containing protein At5g39350 [Vitis vinifera] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis lyrata AL5G39000 scaffold_5 - View
Arabidopsis thaliana AT3G57430 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a chloroplast RNA editing factor. ORGANELLE TRANSCRIPT PROCESSING 84 (OTP84)%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1)%3B Has 46517 Blast hits to 13331 proteins in 240 species: Archae - 0%3B Bacteria - 7%3B Metazoa - 55%3B Fungi - 91%3B Plants - 45789%3B Viruses - 0%3B Other Eukaryotes - 575 (source: NCBI BLink). Chr3 - View
Brassica napus A09p50310 A09 - View
Brassica napus C08p32840 C08 - View
Brassica oleracea BolC8t50895H C8 - View
Brassica rapa BraA09t40483Z A09 - View
Cardamine hirsuta CARHR167630 Pentatricopeptide repeat protein Chr5 - View
Carya illinoinensis CiPaw.13G160000 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr13 + View
Citrullus lanatus ClCG10G016800 Pentatricopeptide repeat-containing protein, putative CG_Chr10 + View
Cucumis melo MELO3C033008.2 Nascent polypeptide associated complex alpha chr08 + View
Capsella rubella Carub.0006s0274 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_6 - View
Capsella rubella Carub.0005s2427 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_5 - View
Davidia involucrata Dinv39614 GWHABJS00000015 + View
Davidia involucrata Dinv36233 GWHABJS00000007 + View
Eutrema salsugineum Thhalv10012634m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_2 - View
Eutrema salsugineum Thhalv10005782m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_19 + View
Fragaria x ananassa FAN02G1125 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-4 - View
Fragaria x ananassa FAN05G2781 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-3 - View
Fragaria x ananassa FAN14G2958 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-1 - View
Gossypium hirsutum Gohir.A01G196600 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A01 + View
Glycine max Glyma.08G159033 PF01535 - PPR repeat (PPR) Gm08 - View
Glycine max Glyma.04G148000 PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Gm04 + View
Lupinus albus Lalb_Chr21g0316461 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lalb_Chr21 + View
Lotus japonicus Lj2g0001877 PTHR24015:SF562 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN chr2 + View
Lonicera japonica Lj7P574T61 GWHAAZE00000007 - View
Lactuca sativa Lsat_1_v5_gn_8_81301 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lsat_1_v8_lg_8 + View
Olea europaea Oeu054267.2 chr17 + View
Oryza sativa ssp. japonica Os07g0203900 Pentatricopeptide repeat domain containing protein. chr07 + View
Punica granatum PGR142G2230 NC_045128.1 + View
Quercus lobata QL07p000785 7 - View
Quercus lobata QL08p042505 8 - View
Rosa chinensis RcHm_v2.0_Chr3g0482401 RcHm_v2.0_Chr3 + View
Rosa chinensis RcHm_v2.0_Chr2g0124091 RcHm_v2.0_Chr2 - View
Salvia bowleyana SalBow6G0844 GWHASIU00000002 - View
Simmondsia chinensis Sc19g0006870 GWHAASQ00000019 - View
Sechium edule Sed0016527 LG12 + View
Solanum lycopersicum Solyc10g080220.2 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q5T3_9MAGN) SL4.0ch10 + View
Schrenkiella parvula Sp5g05170 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch5-1 + View
Schrenkiella parvula Sp6g38910 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch6-6 + View
Solanum pennellii Sopen10g030830 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch10 + View
Solanum pennellii Sopen11g024580 Pentatricopeptide repeat (PPR-like) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch11 - View
Solanum tuberosum PGSC0003DMG400023722 Conserved gene of unknown function ST4.03ch10 - View
Trochodendron aralioides TAR636G0274 group1 - View
Trochodendron aralioides TAR369G0350 group18 - View
Trochodendron aralioides TAR623G0658 group7 - View
Trifolium pratense TPR.G24632 Tp57577_TGAC_v2_LG7 - View