Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0007299 PREDICTED: protein BREVIS RADIX [Vitis vinifera] Contig930 + View
CSS0001282 PREDICTED: protein BREVIS RADIX [Vitis vinifera] Contig1158 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G14160 LG-2 - View
Actinidia chinensis Actinidia14747 Lachesis_group14 - View
Actinidia chinensis Actinidia32769 Lachesis_group14 + View
Actinidia chinensis Actinidia18157 Lachesis_group13 - View
Actinidia chinensis Actinidia01268 Lachesis_group18 - View
Avicennia marina MSTRG.1774 ScioBoG_102834_HRSCAF_103055 - View
Amaranthus hybridus Ah.07g201190 AmaHy_arrow1_Scaffold_7 - View
Amaranthus hybridus Ah.12g055870 Protein BREVIS RADIX (AtBRX) AmaHy_arrow1_Scaffold_12 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SW1CWM PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PB3WD4 PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT1G31880 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others%2C with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root%2C which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele%2C named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict (Li et al. Planta 2009:229(3):593-603)%2C shows enhanced response to ABA-mediated inhibition of root growth. BREVIS RADIX (BRX)%3B CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591)%3B BEST Arabidopsis thaliana protein match is: BREVIS RADIX-like 1 (TAIR:AT2G35600.1)%3B Has 707 Blast hits to 407 proteins in 27 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 0%3B Plants - 705%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr1 + View
Amborella trichopoda ATR0829G195 AmTr_v1.0_scaffold00048 - View
Brassica carinata BcaB07g32845 ChrB07 + View
Brassica carinata BcaC05g27216 ChrC05 + View
Brassica carinata BcaC07g37642 ChrC07 - View
Brassica napus C05p31240 C05 + View
Brassica napus A08p09440 A08 - View
Brassica napus A09p34370 A09 - View
Brassica rapa BraA08t32943Z A08 - View
Beta vulgaris EL10Ac5g11954 PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) Chr5_EL10_PGA_scaffold2 + View
Capsicum annuum CAN.G137.35 PGAv.1.6.scaffold137 + View
Cicer arietinum L. Ca_25110_v3 Ca_LG8_v3 - View
Cicer arietinum L. Ca_22485_v3 Ca_LG7_v3 - View
Corylus avellana Haze_08075 Similar to BRX: Protein BREVIS RADIX (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc08_g05230 Protein BREVIS RADIX chr8 - View
Citrus clementina Ciclev10001638m.g scaffold_5 - View
Ceratophyllum demersum CDE02G2852 1 - View
Ceratophyllum demersum CDE11G0054 9 + View
Carya illinoinensis CiPaw.11G102600 PTHR22870//PTHR22870:SF190 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED Chr11 + View
Carya illinoinensis CiPaw.12G071200 PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) Chr12 + View
Citrullus lanatus ClCG10G001080 BREVIS RADIX-like 1 LENGTH=331 CG_Chr10 - View
Cucumis melo MELO3C013800.2 Protein BREVIS RADIX chr06 - View
Chenopodium quinoa AUR62007391 BRX: Protein BREVIS RADIX C_Quinoa_Scaffold_1971 - View
Chenopodium quinoa AUR62027338 BRX: Protein BREVIS RADIX C_Quinoa_Scaffold_2924 + View
Capsella rubella Carub.0001s3021 PTHR22870//PTHR22870:SF190 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED scaffold_1 + View
Cucumis sativus L. CsaV3_3G001100 protein BREVIS RADIX chr3 - View
Daucus carota DCAR_004243 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv22860 GWHABJS00000017 + View
Davidia involucrata Dinv28020 GWHABJS00000003 + View
Durio zibethinus Duzib205G0084 NW_019168381.1 - View
Durio zibethinus Duzib068G1070 NW_019167838.1 - View
Erigeron canadensis ECA240G1470 Conyza_canadensis_scaffold:5 + View
Eucalyptus grandis Eucgr.D02599 Chr04 - View
Erythranthe guttata Migut.A00550 scaffold_1 + View
Erythranthe guttata Migut.E01345 scaffold_5 + View
Eutrema salsugineum Thhalv10008095m.g PTHR22870//PTHR22870:SF190 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED scaffold_5 - View
Fragaria x ananassa FAN04G3163 PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) Fvb5-4 - View
Fragaria x ananassa FAN18G3603 PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) Fvb5-1 - View
Fragaria vesca FvH4_5g23860 PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) Fvb5 - View
Gossypium hirsutum Gohir.D12G205900 PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) D12 - View
Gossypium hirsutum Gohir.A12G203200 PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) A12 - View
Glycine max Glyma.01G148900 PTHR22870//PTHR22870:SF190 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED Gm01 + View
Glycine max Glyma.09G212800 PTHR22870//PTHR22870:SF190 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED Gm09 + View
Gossypium raimondii Gorai.008G220800 Chr08 - View
Lupinus albus Lalb_Chr09g0325281 PTHR22870//PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Lalb_Chr09 - View
Lupinus albus Lalb_Chr16g0380781 PTHR22870//PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Lalb_Chr16 - View
Lupinus albus Lalb_Chr05g0215461 PTHR22870//PTHR22870:SF190 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED Lalb_Chr05 - View
Lotus japonicus Lj2g0008371 PF08381 - Transcription factor regulating root and shoot growth via Pin3 (BRX) chr2 - View
Lonicera japonica Lj8A336T59 GWHAAZE00000008 - View
Lonicera japonica Lj7C145T7 GWHAAZE00000007 - View
Magnolia biondii MBI04_g12215_MAGBIO AED:0.22 Chr04 + View
Malus domestica MD06G1014400 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein Chr06 - View
Manihot esculenta Manes.15G186944 Chromosome15 - View
Manihot esculenta Manes.17G007200 Chromosome17 + View
Medicago truncatula Medtr8g071220 brevis radix-like protein chr8 + View
Medicago truncatula Medtr5g026970 brevis RADIX-like protein chr5 - View
Nicotiana tabacum Nitab4.5_0001033g0100 Brevis radix (BRX) domain, Transcription factor BREVIS RADIX, N-terminal domain Nitab4.5_0001033 + View
Nicotiana tabacum Nitab4.5_0001424g0050 Brevis radix (BRX) domain, Transcription factor BREVIS RADIX, N-terminal domain Nitab4.5_0001424 + View
Petunia axillaris Peaxi162Scf00408g00840 BREVIS RADIX-like 1 Peaxi162Scf00408 + View
Petunia axillaris Peaxi162Scf00045g00539 BREVIS RADIX-like 1 Peaxi162Scf00045 + View
Punica granatum PGR031G2127 NC_045127.1 + View
Prunus persica Prupe.5G021900 Pp05 + View
Pisum sativum Psat2g141760 Transcription factor regulating root and shoot growth via Pin3 chr2LG1 + View
Populus trichocarpa Potri.001G131800 PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) Chr01 - View
Populus trichocarpa Potri.003G101500 PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) Chr03 + View
Phaseolus vulgaris Phvul.002G131500 Chr02 - View
Quercus lobata QL02p061102 CM012294 - View
Quercus lobata QL12p000880 12 - View
Rosa chinensis RcHm_v2.0_Chr7g0213251 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim07G0138400 chr07 + View
Rhododendron simsii Rhsim11G0025900 chr11 - View
Striga asiatica SGA_v2.0_scaffold111G31368 scaffold111 - View
Striga asiatica SGA_v2.0_scaffold89G27409 scaffold89 - View
Salvia bowleyana SalBow4G2396 GWHASIU00000008 - View
Salvia bowleyana SalBow8G0679 GWHASIU00000004 - View
Salix brachista Sabra01G0101700 GWHAAZH00000001 - View
Salix brachista Sabra03G0069100 GWHAAZH00000003 + View
Simmondsia chinensis Sc01g0006980 GWHAASQ00000001 + View
Sechium edule Sed0015126 LG04 + View
Solanum lycopersicum Solyc12g096110.3 BREVIS RADIX SL4.0ch12 + View
Solanum lycopersicum Solyc08g075920.4 Protein BREVIS RADIX (AHRD V3.3 *** A0A1U8GKL1_CAPAN) SL4.0ch08 - View
Solanum lycopersicum Solyc08g005460.3 Protein BREVIS RADIX (AHRD V3.3 *** A0A1U8F2S0_CAPAN) SL4.0ch08 + View
Schrenkiella parvula Sp1g27600 PTHR22870//PTHR22870:SF190 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED ch1-1 + View
Solanum pennellii Sopen08g001500 Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict :593-603), shows enhanced response to ABA-mediated inhibition of root growth. | BREVIS RADIX (BRX) | CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region | BEST Arabidopsis thaliana protein match is: BREVIS RADIX-like 1 Spenn-ch08 + View
Solanum pennellii Sopen08g024570 Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict :593-603), shows enhanced response to ABA-mediated inhibition of root growth. | BREVIS RADIX (BRX) | CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region | BEST Arabidopsis thaliana protein match is: BREVIS RADIX-like 1 Spenn-ch08 - View
Solanum tuberosum PGSC0003DMG400018488 NIP3_1/NLM9 ST4.03ch08 - View
Solanum tuberosum PGSC0003DMG400030878 Major intrinsic protein ST4.03ch08 - View
Selenicereus undatus Hund14342 Scaffold_33677 + View
Theobroma cacao Thecc.03G316800 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein Chromosome_3 + View
Utricularia gibba unitig_32.g11625 unitig_32 + View
Vaccinium macrocarpon vmacro00068 Similar to BRX: Protein BREVIS RADIX (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro14231 Similar to BRX: Protein BREVIS RADIX (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G0302 CM024074.1 - View
Vigna mungo VMungo0251G0976 CM024069.1 + View
Zea mays Zm00001eb251710 Zm00001e015552 Protein BREVIS RADIX 5 - View