Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0041068 PREDICTED: transportin-1 isoform X1 [Vitis vinifera] Chr3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G14130 LG-8 + View
Acer truncatum Atru.chr5.3440 chr5 + View
Acer truncatum Atru.chr13.221 chr13 - View
Actinidia chinensis Actinidia18041 Lachesis_group12 - View
Actinidia chinensis Actinidia20525 Lachesis_group25 - View
Arabidopsis lyrata AL3G49700 scaffold_3 + View
Aquilegia oxysepala Aqoxy5G01104 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.L5LJLM K18752 - transportin-1 (TNPO1) arahy.Tifrunner.gnm1.Arahy.19 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.47PMEA K18752 - transportin-1 (TNPO1) arahy.Tifrunner.gnm1.Arahy.09 + View
Arabidopsis thaliana AT2G16950 transportin 1 Nuclear import receptor for AtGRP7. transportin 1 (TRN1)%3B CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357)%2C Importin-beta%2C N-terminal (InterPro:IPR001494)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G16960.1)%3B Has 1831 Blast hits to 1766 proteins in 228 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 686%3B Fungi - 563%3B Plants - 278%3B Viruses - 0%3B Other Eukaryotes - 302 (source: NCBI BLink). transportin 1 (TRN1)%3B CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357)%2C Importin-beta%2C N-terminal (InterPro:IPR001494)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT2G16960.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB08g34680 ChrB08 + View
Brassica carinata BcaC01g02966 ChrC01 - View
Brassica carinata BcaB03g16429 ChrB03 + View
Brassica carinata BcaC06g36202 ChrC06 + View
Brassica napus A07p04130 A07 - View
Brassica napus A03p46190 A03 + View
Brassica napus C03p57710 C03 + View
Brassica napus C07p06530 C07 - View
Brassica oleracea BolC7t41074H C7 - View
Brassica oleracea BolC3t18044H C3 + View
Brassica rapa BraA07t28204Z A07 - View
Cannabis sativa CANSAT25G3225 NC_044370.1 - View
Cicer arietinum L. Ca_03296_v3 Ca_LG1_v3 - View
Corylus avellana Haze_02105 Similar to TRN1: Transportin-1 (Arabidopsis thaliana OX%3D3702) 1 - View
Coffea canephora Cc09_g10320 Putative Transportin-1 chr9 + View
Citrus clementina Ciclev10027778m.g scaffold_8 + View
Carpinus fangiana Cfa005285 Cfa02 + View
Cardamine hirsuta CARHR107250 Related to importin beta-2 subunit (Transportin) Chr3 + View
Carya illinoinensis CiPaw.05G085300 PF02985//PF13513 - HEAT repeat (HEAT) // HEAT-like repeat (HEAT_EZ) Chr05 + View
Carya illinoinensis CiPaw.06G120100 K18752 - transportin-1 (TNPO1) Chr06 - View
Cucumis melo MELO3C020836.2 transportin-1 chr11 - View
Carica papaya Cpa.g.sc20.112 supercontig_20 + View
Capsella rubella Carub.0003s3076 K18752 - transportin-1 (TNPO1) scaffold_3 + View
Cucumis sativus L. CsaV3_2G016250 transportin-1 chr2 + View
Davidia involucrata Dinv41918 GWHABJS00000002 + View
Davidia involucrata Dinv14126 GWHABJS00000005 - View
Durio zibethinus Duzib093G0144 NW_019167937.1 + View
Durio zibethinus Duzib052G0573 NW_019167849.1 + View
Eutrema salsugineum Thhalv10022538m.g K18752 - transportin-1 (TNPO1) scaffold_11 - View
Fragaria x ananassa FAN20G2853 K18752 - transportin-1 (TNPO1) Fvb2-3 - View
Fragaria x ananassa FAN27G1670 K18752 - transportin-1 (TNPO1) Fvb2-1 + View
Fragaria x ananassa FAN24G0254 K18752 - transportin-1 (TNPO1) Fvb2-2 - View
Fragaria x ananassa FAN15G1272 K18752 - transportin-1 (TNPO1) Fvb2-4 + View
Fragaria vesca FvH4_2g15650 K18752 - transportin-1 (TNPO1) Fvb2 + View
Gossypium hirsutum Gohir.A01G170600 K18752 - transportin-1 (TNPO1) A01 + View
Gossypium hirsutum Gohir.D02G227200 PTHR10527//PTHR10527:SF3 - IMPORTIN BETA // FI21453P1 D02 + View
Gossypium hirsutum Gohir.D01G001600 K18752 - transportin-1 (TNPO1) D01 - View
Gossypium hirsutum Gohir.A03G205850 PTHR10527//PTHR10527:SF3 - IMPORTIN BETA // FI21453P1 A03 + View
Gossypium hirsutum Gohir.D01G161600 K18752 - transportin-1 (TNPO1) D01 + View
Glycine max Glyma.10G283400 K18752 - transportin-1 (TNPO1) Gm10 + View
Glycine max Glyma.20G106300 K18752 - transportin-1 (TNPO1) Gm20 - View
Gossypium raimondii Gorai.002G200500 Chr02 + View
Gossypium raimondii Gorai.005G255100 Chr05 + View
Lupinus albus Lalb_Chr02g0143501 K18752 - transportin-1 (TNPO1) Lalb_Chr02 + View
Lotus japonicus Lj5g0003348 K18752 - transportin-1 (TNPO1) chr5 - View
Lonicera japonica Lj5A176G61 GWHAAZE00000005 - View
Malus domestica MD10G1127800 transportin 1 Chr10 + View
Malus domestica MD05G1125000 transportin 1 Chr05 + View
Manihot esculenta Manes.11G097900 Chromosome11 + View
Medicago truncatula Medtr1g112920 transportin-1 protein chr1 + View
Nicotiana tabacum Nitab4.5_0000079g0220 Importin-beta, N-terminal domain, Armadillo-like helical, Armadillo-type fold Nitab4.5_0000079 - View
Nicotiana tabacum Nitab4.5_0003698g0020 Armadillo-like helical, Armadillo-type fold, Importin-beta, N-terminal domain Nitab4.5_0003698 - View
Petunia axillaris Peaxi162Scf00362g00438 transportin 1 Peaxi162Scf00362 - View
Punica granatum PGR142G0610 NC_045128.1 - View
Prunus persica Prupe.8G169000 K18752 - transportin-1 (TNPO1) Pp08 + View
Papaver somniferum PSO170G1418 NC_039360.1 + View
Papaver somniferum PSO210G6165 NC_039359.1 + View
Populus trichocarpa Potri.004G177700 K18752 - transportin-1 (TNPO1) Chr04 + View
Populus trichocarpa Potri.009G138200 K18752 - transportin-1 (TNPO1) Chr09 + View
Phaseolus vulgaris Phvul.007G017800 K18752 - transportin-1 (TNPO1) Chr07 - View
Rhododendron simsii Rhsim11G0193600 chr11 + View
Salix brachista Sabra09G0107100 GWHAAZH00000009 + View
Salix brachista Sabra04G0119600 GWHAAZH00000004 + View
Sechium edule Sed0023751 LG05 + View
Sechium edule Sed0004428 LG01 - View
Sapria himalayana SHI05776 scaffold8_16897533 + View
Solanum lycopersicum Solyc01g111780.4 Transportin-1 (AHRD V3.3 *** A0A2G2W9L9_CAPBA) SL4.0ch01 + View
Schrenkiella parvula Sp3g30230 K18752 - transportin-1 (TNPO1) ch3-5 + View
Solanum pennellii Sopen01g053820 Nuclear import receptor for AtGRP7. | transportin 1 (TRN1) | CONTAINS InterPro DOMAIN/s: HEAT , Importin-beta, N-terminal , Armadillo-like helical , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein Spenn-ch01 + View
Trochodendron aralioides TAR376G0505 group14 + View
Trochodendron aralioides TAR625G1234 group4 - View
Theobroma cacao Thecc.02G055400 Importin beta-2 Chromosome_2 - View
Tarenaya hassleriana THA.LOC104819659 transportin-1 NW_010966177.1 + View
Trifolium pratense TPR.G2434 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI75G1738 NC_052253.1 + View
Tripterygium wilfordii TWI31G0460 NC_052233.1 + View
Vaccinium macrocarpon vmacro02292 Similar to TRN1: Transportin-1 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G0502 CM024071.1 + View
Vitis vinifera GSVIVG01008744001 chr18 - View
Vitis vinifera GSVIVG01023974001 chr3 + View