Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0044779 PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera] Chr1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G14760 LG-8 - View
Aethionema arabicum Aa31LG7G4980 LG-7 + View
Aethionema arabicum Aa31LG6G12450 LG-6 - View
Acer truncatum Atru.chr3.36 chr3 + View
Actinidia chinensis Actinidia28615 Lachesis_group27 - View
Actinidia chinensis Actinidia22886 Lachesis_group26 - View
Actinidia chinensis Actinidia37909 Lachesis_group7 - View
Actinidia chinensis Actinidia32991 Lachesis_group11 + View
Arabidopsis lyrata AL3G50330 scaffold_3 - View
Arabidopsis lyrata AL7G15690 scaffold_7 + View
Amaranthus hybridus Ah.00g001100 RING-H2 finger protein ATL8 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase ATL8) AmaHy_arrow1_Contig177_quiver + View
Aquilegia oxysepala Aqoxy5G00973 CHR05 - View
Aquilegia oxysepala Aqoxy6G01564 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0GE1ZU PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.N0BVKE PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.U1NS8X PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q758V8 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.U67RVC PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.08 + View
Arabidopsis thaliana AT2G17450 RING-H2 finger A3A Encodes a putative RING-H2 finger protein RHA3a. RING-H2 finger A3A (RHA3A)%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING-H2 finger A3B (TAIR:AT4G35480.1)%3B Has 9845 Blast hits to 9818 proteins in 280 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2501%3B Fungi - 735%3B Plants - 5213%3B Viruses - 41%3B Other Eukaryotes - 1355 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT4G35480 RING-H2 finger A3B Encodes a putative RING-H2 finger protein RHA3b. RING-H2 finger A3B (RHA3B)%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: response to chitin%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING-H2 finger A3A (TAIR:AT2G17450.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr4 - View
Amborella trichopoda ATR0807G001 AmTr_v1.0_scaffold00044 - View
Brassica carinata BcaB03g12414 ChrB03 - View
Brassica carinata BcaB07g32075 ChrB07 + View
Brassica carinata BcaB08g34736 ChrB08 - View
Brassica carinata BcaC01g02915 ChrC01 + View
Brassica carinata BcaC01g00498 ChrC01 - View
Brassica carinata BcaB03g14299 ChrB03 - View
Brassica carinata BcaB03g12851 ChrB03 - View
Brassica napus C08p20380 C08 + View
Brassica napus C07p61170 C07 - View
Brassica napus C07p05830 C07 + View
Brassica napus A03p63590 A03 - View
Brassica napus A07p03600 A07 + View
Brassica napus A06p33940 A06 + View
Brassica napus A08p29220 A08 - View
Brassica oleracea BolC7t40986H C7 + View
Brassica oleracea BolC8t49667H C8 + View
Brassica oleracea BolC7t46541H C7 - View
Brassica oleracea BolC7t42815H C7 - View
Brassica oleracea BolC3t18101H C3 - View
Brassica rapa BraA06t24790Z A06 + View
Brassica rapa BraA07t29287Z A07 - View
Brassica rapa BraA03t15430Z A03 - View
Brassica rapa BraA08t34857Z A08 - View
Brassica rapa BraA06t26327Z A06 + View
Brassica rapa BraA07t28148Z A07 + View
Cannabis sativa CANSAT25G3663 NC_044370.1 - View
Cicer arietinum L. Ca_15391_v3 Ca_LG5_v3 - View
Cicer arietinum L. Ca_02841_v3 Ca_LG1_v3 - View
Cicer arietinum L. Ca_24993_v3 Ca_LG8_v3 + View
Corylus avellana Haze_03635 Similar to ATL8: RING-H2 finger protein ATL8 (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc07_g12050 RING-H2 finger protein ATL80 chr7 + View
Citrus clementina Ciclev10004041m.g scaffold_5 + View
Carpinus fangiana Cfa014125 Cfa05 + View
Carpinus fangiana Cfa007103 Cfa02 + View
Cardamine hirsuta CARHR107620 Ring finger protein Chr3 - View
Cardamine hirsuta CARHR021250 Ring finger protein Chr1 + View
Carya illinoinensis CiPaw.07G134800 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr07 - View
Carya illinoinensis CiPaw.08G076500 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr08 + View
Carya illinoinensis CiPaw.08G182400 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr08 + View
Citrullus lanatus ClCG11G018920 Ring finger protein CG_Chr11 + View
Cucumis melo MELO3C017047.2 RING-H2 finger protein ATL80 chr07 - View
Carica papaya Cpa.g.sc26.150 supercontig_26 - View
Chenopodium quinoa AUR62003729 ATL80: RING-H2 finger protein ATL80 C_Quinoa_Scaffold_2370 + View
Chenopodium quinoa AUR62013178 ATL80: RING-H2 finger protein ATL80 C_Quinoa_Scaffold_1040 + View
Chenopodium quinoa AUR62016571 ATL80: RING-H2 finger protein ATL80 C_Quinoa_Scaffold_3514 - View
Chenopodium quinoa AUR62010177 ATL80: RING-H2 finger protein ATL80 C_Quinoa_Scaffold_1257 + View
Capsella rubella Carub.0007s0483 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED scaffold_7 - View
Capsella rubella Carub.0003s3153 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED scaffold_3 - View
Capsella rubella Carub.0001s2028 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED scaffold_1 + View
Cucumis sativus L. CsaV3_4G037520 RING-H2 finger protein ATL80 chr4 + View
Daucus carota DCAR_016793 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv28305 GWHABJS00000012 + View
Davidia involucrata Dinv40207 GWHABJS00000014 - View
Durio zibethinus Duzib093G2091 NW_019167937.1 + View
Durio zibethinus Duzib147G0296 NW_019168470.1 + View
Erigeron canadensis ECA238G4752 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA246G3966 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.I02211 Chr09 - View
Eucalyptus grandis Eucgr.F01804 Chr06 + View
Eutrema salsugineum Thhalv10023141m.g PTHR14155:SF74 - RING-H2 FINGER PROTEIN ATL45-RELATED scaffold_11 + View
Eutrema salsugineum Thhalv10027339m.g PTHR14155:SF74 - RING-H2 FINGER PROTEIN ATL45-RELATED scaffold_1 + View
Fragaria x ananassa FAN19G1964 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb1-4 - View
Fragaria x ananassa FAN27G1023 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED Fvb2-1 + View
Fragaria x ananassa FAN24G2574 PTHR14155:SF74 - RING-H2 FINGER PROTEIN ATL45-RELATED Fvb2-2 - View
Fragaria x ananassa FAN28G0189 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb1-1 + View
Fragaria x ananassa FAN26G0834 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb1-2 - View
Fragaria x ananassa FAN23G1207 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb1-3 - View
Fragaria vesca FvH4_1g10140 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb1 - View
Fragaria vesca FvH4_2g16840 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED Fvb2 + View
Gossypium hirsutum Gohir.D01G087600 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED D01 - View
Gossypium hirsutum Gohir.A01G102500 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED A01 - View
Glycine max Glyma.16G112200 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm16 + View
Glycine max Glyma.06G015200 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm06 - View
Glycine max Glyma.11G087600 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm11 + View
Glycine max Glyma.09G196700 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm09 - View
Glycine max Glyma.01G157400 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm01 - View
Glycine max Glyma.04G015200 KOG1493//KOG2930 - Anaphase-promoting complex (APC), subunit 11 // SCF ubiquitin ligase, Rbx1 component Gm04 - View
Gossypium raimondii Gorai.002G113500 Chr02 - View
Helianthus annuus HanXRQChr16g0532061 Putative zinc finger, RING/FYVE/PHD-type HanXRQChr16 + View
Hydrangea macrophylla Hma1.2p1_0085F.1_g044470 Hma1.2p1_0085F.1 - View
Lupinus albus Lalb_Chr05g0214921 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lalb_Chr05 + View
Lupinus albus Lalb_Chr16g0380151 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lalb_Chr16 + View
Lupinus albus Lalb_Chr16g0391691 KOG1493//KOG2930 - Anaphase-promoting complex (APC), subunit 11 // SCF ubiquitin ligase, Rbx1 component Lalb_Chr16 + View
Lupinus albus Lalb_Chr09g0324821 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lalb_Chr09 + View
Lupinus albus Lalb_Chr23g0265601 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lalb_Chr23 - View
Lotus japonicus Lj4g0005972 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED chr4 - View
Lotus japonicus Lj2g0003141 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED chr2 + View
Lotus japonicus Lj1g0023581 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED chr1 - View
Lonicera japonica Lj2P502T24 GWHAAZE00000002 + View
Lonicera japonica Lj4P239T24 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_8_113441 KOG1493//KOG2930 - Anaphase-promoting complex (APC), subunit 11 // SCF ubiquitin ligase, Rbx1 component Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_2_74100 Lsat_1_v8_lg_2 - View
Lactuca sativa Lsat_1_v5_gn_3_68860 Lsat_1_v8_lg_3 - View
Magnolia biondii MBI08_g29075_MAGBIO AED:0.03 Chr08 - View
Malus domestica MD15G1228600 RING/U-box superfamily protein Chr15 - View
Malus domestica MD02G1113400 RING/U-box superfamily protein Chr02 - View
Malus domestica MD06G1005400 RING/U-box superfamily protein Chr06 - View
Manihot esculenta Manes.18G002800 Chromosome18 - View
Manihot esculenta Manes.05G126000 Chromosome05 - View
Manihot esculenta Manes.01G156900 Chromosome01 + View
Manihot esculenta Manes.02G115400 Chromosome02 + View
Medicago truncatula Medtr3g116000 anaphase-promoting complex subunit 11 RING-H2 finger protein chr3 + View
Medicago truncatula Medtr5g024730 anaphase-promoting complex subunit 11 RING-H2 finger protein chr5 + View
Medicago truncatula Medtr8g073120 anaphase-promoting complex subunit 11 RING-H2 finger protein chr8 - View
Nelumbo nucifera Nn5g31023 chr5 + View
Nelumbo nucifera Nn6g31665 chr6 - View
Nicotiana tabacum Nitab4.5_0000855g0030 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0000855 + View
Nicotiana tabacum Nitab4.5_0000495g0060 Unknown Nitab4.5_0000495 - View
Nicotiana tabacum Nitab4.5_0000467g0100 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0000467 + View
Olea europaea Oeu045739.1 chr10 + View
Oryza sativa ssp. japonica Os09g0554200 Zinc finger, RING/FYVE/PHD-type domain containing protein. chr09 - View
Petunia axillaris Peaxi162Scf00680g00410 RING/U-box superfamily protein Peaxi162Scf00680 + View
Punica granatum PGR031G1175 NC_045127.1 + View
Punica granatum PGR083G1652 NC_045133.1 + View
Punica granatum PGR119G2347 NC_045132.1 - View
Prunus persica Prupe.5G006700 PTHR14155:SF74 - RING-H2 FINGER PROTEIN ATL45-RELATED Pp05 - View
Prunus persica Prupe.7G185500 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Pp07 + View
Pisum sativum Psat4g105720 Ring finger domain chr4LG4 + View
Papaver somniferum PSO210G0303 NC_039359.1 + View
Papaver somniferum PSO170G5591 NC_039360.1 - View
Papaver somniferum PSO541G0890 NC_039363.1 + View
Papaver somniferum PSO675G4511 NC_039358.1 + View
Populus trichocarpa Potri.007G064401 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr07 + View
Populus trichocarpa Potri.002G006400 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr02 - View
Populus trichocarpa Potri.005G099000 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr05 - View
Phaseolus vulgaris Phvul.002G118000 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr02 + View
Phaseolus vulgaris Phvul.003G271400 PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr03 + View
Phaseolus vulgaris Phvul.009G007400 KOG1493//KOG2930 - Anaphase-promoting complex (APC), subunit 11 // SCF ubiquitin ligase, Rbx1 component Chr09 + View
Quercus lobata QL06p053274 6 + View
Rosa chinensis RcHm_v2.0_Chr2g0096911 RcHm_v2.0_Chr2 - View
Rosa chinensis RcHm_v2.0_Chr6g0280971 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim06G0004100 chr06 - View
Rhododendron simsii Rhsim10G0192000 chr10 - View
Rhododendron simsii Rhsim07G0257300 chr07 + View
Salix brachista Sabra05G0197700 GWHAAZH00000005 + View
Salix brachista Sabra05G0081400 GWHAAZH00000005 - View
Salix brachista Sabra02G0004500 GWHAAZH00000002 - View
Simmondsia chinensis Sc15g0004090 GWHAASQ00000015 - View
Sechium edule Sed0005605 LG01 - View
Sechium edule Sed0011239 LG04 + View
Solanum lycopersicum Solyc03g032060.1 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LI04_ARTAN) SL4.0ch03 - View
Solanum lycopersicum Solyc02g082420.3 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LI04_ARTAN) SL4.0ch02 - View
Solanum lycopersicum Solyc02g038805.1 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LB75_ARTAN) SL4.0ch02 - View
Schrenkiella parvula Sp7g33260 PTHR14155:SF74 - RING-H2 FINGER PROTEIN ATL45-RELATED ch7-6 - View
Schrenkiella parvula Sp3g30810 PTHR14155:SF74 - RING-H2 FINGER PROTEIN ATL45-RELATED ch3-6 - View
Solanum pennellii Sopen04g036320 ATL8 | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch04 + View
Solanum pennellii Sopen02g027080 ATL8 | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch02 - View
Solanum pennellii Sopen02g012490 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: response to chitin | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400009919 Zinc finger family protein ST4.03ch04 + View
Solanum tuberosum PGSC0003DMG400023160 RING-H2 finger protein ATL80 ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400013666 RING-H2 finger protein ATL80 ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400038556 RING-H2 finger protein ATL8 ST4.03ch03 - View
Trochodendron aralioides TAR376G0879 group14 + View
Trochodendron aralioides TAR628G0785 group5 + View
Theobroma cacao Thecc.01G002800 Basic helix-loop-helix-containing protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104819707 probable E3 ubiquitin-protein ligase ATL44 NW_010966177.1 - View
Tarenaya hassleriana THA.LOC104807418 probable E3 ubiquitin-protein ligase ATL44 NW_010963495.1 - View
Tarenaya hassleriana THA.LOC104809883 RING-H2 finger protein ATL80-like NW_010960187.1 + View
Trifolium pratense TPR.G13735 Tp57577_TGAC_v2_LG4 - View
Vaccinium macrocarpon vmacro04421 Similar to ATL8: RING-H2 finger protein ATL8 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro20613 Similar to ATL80: RING-H2 finger protein ATL80 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G3459 CM024074.1 + View
Vigna mungo VMungo0251G1072 CM024069.1 + View
Vigna mungo VMungo1309G2755 CM024072.1 + View
Vitis vinifera GSVIVG01022306001 chr7 + View