Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr3.2183 | chr3 | + | View | |
Actinidia chinensis | Actinidia06860 | Lachesis_group13 | - | View | |
Actinidia chinensis | Actinidia16275 | Lachesis_group24 | - | View | |
Avicennia marina | MSTRG.18855 | ScioBoG_22153_HRSCAF_22259 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.XZ28CK | PTHR10315//PTHR10315:SF45 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE | arahy.Tifrunner.gnm1.Arahy.16 | - | View |
Capsicum annuum | CAN.G575.16 | PGAv.1.6.scaffold575 | - | View | |
Cannabis sativa | CANSAT11G2116 | NC_044377.1 | + | View | |
Corylus avellana | Haze_22999 | Similar to SINAT2: E3 ubiquitin-protein ligase SINAT2 (Arabidopsis thaliana OX%3D3702) | 6 | - | View |
Citrus clementina | Ciclev10012305m.g | scaffold_6 | + | View | |
Citrus clementina | Ciclev10016045m.g | scaffold_2 | - | View | |
Carpinus fangiana | Cfa009631 | Cfa04 | - | View | |
Carya illinoinensis | CiPaw.10G025400 | K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) | Chr10 | - | View |
Carya illinoinensis | CiPaw.13G171000 | PTHR10315//PTHR10315:SF45 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE | Chr13 | - | View |
Citrullus lanatus | ClCG02G023800 | E3 ubiquitin ligase-like protein | CG_Chr02 | + | View |
Cucumis melo | MELO3C014659.2 | E3 ubiquitin-protein ligase | chr05 | - | View |
Carica papaya | Cpa.g.sc119.92 | supercontig_119 | + | View | |
Cucumis sativus L. | CsaV3_4G023570 | E3 ubiquitin-protein ligase | chr4 | - | View |
Davidia involucrata | Dinv09747 | GWHABJS00000003 | - | View | |
Davidia involucrata | Dinv24055 | GWHABJS00000021 | + | View | |
Durio zibethinus | Duzib128G1878 | NW_019168481.1 | - | View | |
Erigeron canadensis | ECA248G1558 | Conyza_canadensis_scaffold:9 | - | View | |
Erigeron canadensis | ECA238G2642 | Conyza_canadensis_scaffold:6 | + | View | |
Eucalyptus grandis | Eucgr.B02613 | Chr02 | + | View | |
Fragaria x ananassa | FAN16G1472 | PTHR10315//PTHR10315:SF45 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE | Fvb3-3 | + | View |
Fragaria x ananassa | FAN11G1387 | PTHR10315:SF45 - E3 UBIQUITIN-PROTEIN LIGASE | Fvb3-4 | - | View |
Fragaria x ananassa | FAN21G1472 | PTHR10315//PTHR10315:SF45 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE | Fvb3-2 | + | View |
Fragaria x ananassa | FAN25G3445 | PTHR10315:SF45 - E3 UBIQUITIN-PROTEIN LIGASE | Fvb3-1 | - | View |
Fragaria vesca | FvH4_3g44521 | PTHR10315//PTHR10315:SF45 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE | Fvb3 | + | View |
Lotus japonicus | Lj5g0013772 | PTHR10315//PTHR10315:SF45 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE | chr5 | + | View |
Lonicera japonica | Lj1A461G26 | GWHAAZE00000001 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_1_68321 | PTHR10315:SF45 - E3 UBIQUITIN-PROTEIN LIGASE | Lsat_1_v8_lg_1 | - | View |
Lactuca sativa | Lsat_1_v5_gn_2_101440 | PTHR10315:SF45 - E3 UBIQUITIN-PROTEIN LIGASE | Lsat_1_v8_lg_2 | + | View |
Malus domestica | MD03G1012000 | seven in absentia of Arabidopsis 2 | Chr03 | + | View |
Malus domestica | MD12G1055100 | seven in absentia of Arabidopsis 2 | Chr12 | - | View |
Malus domestica | MD11G1014900 | seven in absentia of Arabidopsis 2 | Chr11 | - | View |
Manihot esculenta | Manes.03G089500 | Chromosome03 | - | View | |
Punica granatum | PGR119G1753 | NC_045132.1 | - | View | |
Prunus persica | Prupe.6G012400 | Pp06 | - | View | |
Papaver somniferum | PSO384G4710 | NC_039368.1 | - | View | |
Papaver somniferum | PSO339G3937 | NC_039366.1 | - | View | |
Populus trichocarpa | Potri.001G010500 | PTHR10315//PTHR10315:SF45 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE | Chr01 | - | View |
Populus trichocarpa | Potri.003G215400 | PTHR10315//PTHR10315:SF45 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE | Chr03 | + | View |
Populus trichocarpa | Potri.016G059700 | PTHR10315//PTHR10315:SF34 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED | Chr16 | - | View |
Quercus lobata | QL01p010059 | 1 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr5g0081221 | RcHm_v2.0_Chr5 | + | View | |
Rhododendron simsii | Rhsim13G0228200 | chr13 | + | View | |
Salix brachista | Sabra03G0160700 | GWHAAZH00000003 | + | View | |
Sechium edule | Sed0000452 | LG05 | - | View | |
Solanum lycopersicum | Solyc01g006190.3 | E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A1U8H1Q2_CAPAN) | SL4.0ch01 | - | View |
Solanum pennellii | Sopen01g002200 | Encodes a RING finger domain containing protein that interacts with AtRAP2.2. | seven in absentia of Arabidopsis 2 (SINAT2) | FUNCTIONS IN: protein binding | INVOLVED IN: multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process | LOCATED IN: nucleus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: TRAF-like , Seven-in-absentia protein, TRAF-like domain , Zinc finger, RING-type , Zinc finger, SIAH-type , Seven In Absentia Homolog-type , Seven-in-absentia protein, sina , TRAF-type | BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains | Spenn-ch01 | - | View |
Solanum tuberosum | PGSC0003DMG400004288 | Ubiquitin ligase SINAT2 | ST4.03ch12 | + | View |
Solanum tuberosum | PGSC0003DMG401032194 | Ubiquitin ligase SINAT2 | ST4.03ch01 | - | View |
Trochodendron aralioides | TAR633G0783 | group2 | - | View | |
Theobroma cacao | Thecc.05G174600 | Seven in absentia of 2 | Chromosome_5 | + | View |
Tripterygium wilfordii | TWI60G0425 | NC_052246.1 | - | View | |
Tripterygium wilfordii | TWI34G1360 | NC_052235.1 | + | View | |
Tripterygium wilfordii | TWI32G1153 | NC_052254.1 | + | View | |
Vaccinium macrocarpon | vmacro04252 | Similar to SINAT2: E3 ubiquitin-protein ligase SINAT2 (Arabidopsis thaliana OX%3D3702) | chr9_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vitis vinifera | GSVIVG01025381001 | chr6 | - | View |