Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0044171 hypothetical protein CICLE_v10031403mg [Citrus clementina] Chr1 + View
CSS0023579 PREDICTED: protein trichome birefringence-like 34 [Vitis vinifera] Chr10 + View
CSS0023872 unnamed protein product [Coffea canephora] Chr4 + View
CSS0012900 PREDICTED: protein PMR5 [Vitis vinifera] Chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G10930 LG-10 + View
Acer truncatum Atru.chr8.2266 chr8 + View
Acer truncatum Atru.chr12.60 chr12 + View
Acer truncatum Atru.chr12.105 chr12 + View
Amaranthus hybridus Ah.16g103630 AmaHy_arrow1_Scaffold_16 + View
Aquilegia oxysepala Aqoxy2G00851 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UX09RC PTHR32285//PTHR32285:SF10 - FAMILY NOT NAMED // PROTEIN ESKIMO 1 arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GWHQ4I PTHR32285//PTHR32285:SF10 - FAMILY NOT NAMED // PROTEIN ESKIMO 1 arahy.Tifrunner.gnm1.Arahy.07 - View
Brassica carinata BcaB01g00043 ChrB01 - View
Brassica napus A09p48940 A09 + View
Brassica napus C08p31310 C08 + View
Brassica oleracea BolC8t50752H C8 + View
Cannabis sativa CANSAT35G0083 NC_044378.1 + View
Cicer arietinum L. Ca_05973_v3 Ca_LG2_v3 + View
Corylus avellana Haze_17239 Similar to ESK1: Protein ESKIMO 1 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc02_g06330 Plant protein of unknown function (DUF828) chr2 - View
Citrus clementina Ciclev10028623m.g scaffold_8 + View
Citrus clementina Ciclev10011779m.g scaffold_6 + View
Citrus clementina Ciclev10031403m.g scaffold_4 + View
Ceratophyllum demersum CDE04G3790 2 + View
Ceratophyllum demersum CDE06G1571 4 + View
Carpinus fangiana Cfa017187 Cfa07 - View
Carpinus fangiana Cfa011719 Cfa04 + View
Carpinus fangiana Cfa001306 Cfa01 - View
Cardamine hirsuta CARHR166070 TRICHOME BIREFRINGENCE-LIKE 28 Chr5 + View
Carya illinoinensis CiPaw.14G057700 PTHR32285:SF14 - PROTEIN PMR5-RELATED Chr14 - View
Carya illinoinensis CiPaw.09G211000 PTHR32285//PTHR32285:SF7//PTHR34966 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 // FAMILY NOT NAMED Chr09 + View
Carya illinoinensis CiPaw.01G299900 PTHR32285:SF10 - PROTEIN ESKIMO 1 Chr01 + View
Carya illinoinensis CiPaw.02G193400 PTHR32285//PTHR32285:SF10 - FAMILY NOT NAMED // PROTEIN ESKIMO 1 Chr02 + View
Cucumis melo MELO3C008304.2 Protein trichome birefringence-like 1 chr03 + View
Carica papaya Cpa.g.sc19.162 supercontig_19 - View
Chenopodium quinoa AUR62012266 ESK1: Protein ESKIMO 1 C_Quinoa_Scaffold_1995 + View
Daucus carota DCAR_011822 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv21744 GWHABJS00000004 - View
Davidia involucrata Dinv28659 GWHABJS00000010 + View
Davidia involucrata Dinv10612 GWHABJS00000009 + View
Durio zibethinus Duzib168G1888 NW_019168159.1 - View
Erigeron canadensis ECA232G2536 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA238G1736 Conyza_canadensis_scaffold:6 + View
Erythranthe guttata Migut.F01401 scaffold_6 + View
Erythranthe guttata Migut.F00671 scaffold_6 - View
Fragaria x ananassa FAN01G0145 PTHR32285//PTHR32285:SF10 - FAMILY NOT NAMED // PROTEIN ESKIMO 1 Fvb7-4 - View
Fragaria x ananassa FAN09G2738 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Fvb6-2 - View
Fragaria x ananassa FAN06G3320 PTHR32285//PTHR32285:SF10 - FAMILY NOT NAMED // PROTEIN ESKIMO 1 Fvb7-2 + View
Fragaria x ananassa FAN03G0221 PTHR32285:SF10 - PROTEIN ESKIMO 1 Fvb7-3 + View
Fragaria vesca FvH4_6g11230 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Fvb6 - View
Fragaria vesca FvH4_7g24620 PTHR32285:SF10 - PROTEIN ESKIMO 1 Fvb7 + View
Gossypium hirsutum Gohir.A10G238100 PTHR32285:SF62 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 33 A10 - View
Gossypium hirsutum Gohir.A13G014100 PTHR32285:SF62 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 33 A13 - View
Gossypium hirsutum Gohir.D10G250000 PTHR32285:SF62 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 33 D10 - View
Glycine max Glyma.02G227950 Gm02 + View
Glycine max Glyma.02G258000 PTHR32285//PTHR32285:SF10 - FAMILY NOT NAMED // PROTEIN ESKIMO 1 Gm02 + View
Glycine max Glyma.14G058500 PTHR32285//PTHR32285:SF10 - FAMILY NOT NAMED // PROTEIN ESKIMO 1 Gm14 - View
Glycine max Glyma.07G152000 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Gm07 + View
Glycine max Glyma.18G061200 PTHR32285:SF14 - PROTEIN PMR5-RELATED Gm18 - View
Gossypium raimondii Gorai.011G290400 Chr11 - View
Hydrangea macrophylla Hma1.2p1_0523F.1_g172210 Hma1.2p1_0523F.1 - View
Hydrangea macrophylla Hma1.2p1_0281F.1_g113240 Hma1.2p1_0281F.1 + View
Lotus japonicus Lj6g0004229 PTHR32285//PTHR32285:SF10 - FAMILY NOT NAMED // PROTEIN ESKIMO 1 chr6 - View
Lonicera japonica Lj1C958T4 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_9_62180 PTHR32285:SF10 - PROTEIN ESKIMO 1 Lsat_1_v8_lg_9 + View
Lactuca sativa Lsat_1_v5_gn_5_173120 Lsat_1_v8_lg_5 + View
Lactuca sativa Lsat_1_v5_gn_2_124521 Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_8_13020 PTHR32285:SF62 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 33 Lsat_1_v8_lg_8 - View
Malus domestica MD07G1223300 Plant protein of unknown function (DUF828) Chr07 + View
Malus domestica MD01G1154500 Plant protein of unknown function (DUF828) Chr01 + View
Malus domestica MD03G1066200 Plant protein of unknown function (DUF828) Chr03 + View
Malus domestica MD12G1171500 Plant protein of unknown function (DUF828) Chr12 + View
Manihot esculenta Manes.07G131000 Chromosome07 + View
Medicago truncatula Medtr5g082880 Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein chr5 + View
Nelumbo nucifera Nn2g13156 chr2 + View
Oryza sativa ssp. japonica Os05g0470000 Domain of unknown function DUF231, plant domain containing protein. chr05 - View
Punica granatum PGR044G2745 NC_045134.1 + View
Punica granatum PGR142G2737 NC_045128.1 + View
Prunus persica Prupe.6G054900 Pp06 - View
Prunus persica Prupe.6G279700 PTHR32285:SF7 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Pp06 + View
Pisum sativum Psat2g032040 GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p chr2LG1 - View
Papaver somniferum PSO801G0068 NW_020628818.1 + View
Populus trichocarpa Potri.016G119100 PTHR32285//PTHR32285:SF7 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Chr16 - View
Populus trichocarpa Potri.008G069900 PTHR32285//PTHR32285:SF10 - FAMILY NOT NAMED // PROTEIN ESKIMO 1 Chr08 + View
Phaseolus vulgaris Phvul.008G096800 PTHR32285:SF7 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 3 Chr08 - View
Quercus lobata QL07p035131 7 - View
Quercus lobata QL08p063329 8 - View
Quercus lobata QL01p038822 1 + View
Rosa chinensis RcHm_v2.0_Chr3g0462711 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim05G0217200 chr05 + View
Rhododendron simsii Rhsim09G0177800 chr09 + View
Striga asiatica SGA_v2.0_scaffold44G16685 scaffold44 - View
Salix brachista Sabra08G0051500 GWHAAZH00000008 + View
Salix brachista Sabra16G0115000 GWHAAZH00000016 - View
Simmondsia chinensis Sc11g0005120 GWHAASQ00000011 + View
Solanum lycopersicum Solyc06g051350.4 Protein trichome birefringence-like 28 (AHRD V3.3 *** A0A1J3CSC5_NOCCA) SL4.0ch06 - View
Schrenkiella parvula Sp4g22500 PTHR32285//PTHR32285:SF10 - FAMILY NOT NAMED // PROTEIN ESKIMO 1 ch4-6 + View
Schrenkiella parvula Sp5g06540 PTHR32285:SF10 - PROTEIN ESKIMO 1 ch5-1 - View
Solanum pennellii Sopen03g026110 Encodes ESK1 (Eskimo1). A member of a large gene family of DUF231 domain proteins whose members encode a total of 45 proteins of unknown function. ESK1 functions as a negative regulator of cold acclimation. Mutations in the ESK1 gene provides strong freezing tolerance. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff, Wolf Scheible, 2010, personal communication). | ESKIMO 1 (ESK1) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: response to freezing, positive regulation of transcription, response to cold | LOCATED IN: cellular_component unknown | EXPRESSED IN: stem, fruit, root, flower, leaf | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant | BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 28 Spenn-ch03 - View
Solanum pennellii Sopen06g017320 Encodes ESK1 (Eskimo1). A member of a large gene family of DUF231 domain proteins whose members encode a total of 45 proteins of unknown function. ESK1 functions as a negative regulator of cold acclimation. Mutations in the ESK1 gene provides strong freezing tolerance. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff, Wolf Scheible, 2010, personal communication). | ESKIMO 1 (ESK1) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: response to freezing, positive regulation of transcription, response to cold | LOCATED IN: cellular_component unknown | EXPRESSED IN: stem, fruit, root, flower, leaf | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant | BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 28 Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400027728 Conserved gene of unknown function ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400027219 Conserved gene of unknown function ST4.03ch05 - View
Solanum tuberosum PGSC0003DMG400015896 Conserved gene of unknown function ST4.03ch10 - View
Selenicereus undatus Hund15920 Scaffold_33677 - View
Selenicereus undatus Hund13876 Scaffold_33679 + View
Trochodendron aralioides TAR623G1046 group7 + View
Trochodendron aralioides TAR636G1661 group1 - View
Trochodendron aralioides TAR633G2443 group2 + View
Tripterygium wilfordii TWI79G0841 NC_052238.1 - View
Tripterygium wilfordii TWI73G0103 NC_052232.1 + View
Tripterygium wilfordii TWI31G0490 NC_052233.1 - View
Tripterygium wilfordii TWI09G1090 NC_052245.1 - View
Vaccinium macrocarpon vmacro10036 Similar to ESK1: Protein ESKIMO 1 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro20293 Similar to TBL3: Protein trichome birefringence-like 3 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0540G0938 CM024075.1 - View
Vigna mungo VMungo0647G1149 CM024073.1 + View
Vigna mungo VMungo1383G1167 CM024070.1 + View
Vitis vinifera GSVIVG01011180001 chr8 + View
Vitis vinifera GSVIVG01024714001 chr6 + View